RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
SNRNP27-201ENST00000244227 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
SNRNP27-201ENST00000244227 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
SNRNP27-201ENST00000244227 APLP2Q06481 763 aa21.29■■□□□ 1
SNRNP27-201ENST00000244227 HRCP23327 699 aa21.28■■□□□ 1
SNRNP27-201ENST00000244227 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
SNRNP27-201ENST00000244227 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
SNRNP27-201ENST00000244227 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
SNRNP27-201ENST00000244227 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
SNRNP27-201ENST00000244227 SAMD9Q5K651 1589 aa21.2■□□□□ 0.98
SNRNP27-201ENST00000244227 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
SNRNP27-201ENST00000244227 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
SNRNP27-201ENST00000244227 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
SNRNP27-201ENST00000244227 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
SNRNP27-201ENST00000244227 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
SNRNP27-201ENST00000244227 PCF11O94913 1555 aaKnown RBP21.12■□□□□ 0.97
SNRNP27-201ENST00000244227 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
SNRNP27-201ENST00000244227 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
SNRNP27-201ENST00000244227 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
SNRNP27-201ENST00000244227 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
SNRNP27-201ENST00000244227 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
SNRNP27-201ENST00000244227 FYCO1Q9BQS8 1478 aa21.08■□□□□ 0.96
SNRNP27-201ENST00000244227 UGGT2Q9NYU1 1516 aa21.06■□□□□ 0.96
SNRNP27-201ENST00000244227 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
SNRNP27-201ENST00000244227 LRRC9Q6ZRR7 1453 aa21.02■□□□□ 0.96
SNRNP27-201ENST00000244227 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
SNRNP27-201ENST00000244227 CEP170Q5SW79 1584 aa21.02■□□□□ 0.95
SNRNP27-201ENST00000244227 NUP160Q12769 1436 aa21■□□□□ 0.95
SNRNP27-201ENST00000244227 FBLN2P98095 1184 aa20.99■□□□□ 0.95
SNRNP27-201ENST00000244227 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
SNRNP27-201ENST00000244227 DISP1Q96F81 1524 aa20.97■□□□□ 0.95
SNRNP27-201ENST00000244227 RRBP1Q9P2E9 1410 aaKnown RBP20.97■□□□□ 0.95
SNRNP27-201ENST00000244227 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
SNRNP27-201ENST00000244227 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
SNRNP27-201ENST00000244227 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
SNRNP27-201ENST00000244227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
SNRNP27-201ENST00000244227 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
SNRNP27-201ENST00000244227 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
SNRNP27-201ENST00000244227 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
SNRNP27-201ENST00000244227 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
SNRNP27-201ENST00000244227 HECW1Q76N89 1606 aa20.83■□□□□ 0.93
SNRNP27-201ENST00000244227 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
SNRNP27-201ENST00000244227 CHD1O14646 1710 aa20.8■□□□□ 0.92
SNRNP27-201ENST00000244227 EPRSP07814 1512 aaKnown RBP20.8■□□□□ 0.92
SNRNP27-201ENST00000244227 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
SNRNP27-201ENST00000244227 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
SNRNP27-201ENST00000244227 CARMIL2Q6F5E8 1435 aa20.78■□□□□ 0.92
SNRNP27-201ENST00000244227 MAGI3Q5TCQ9 1506 aa20.78■□□□□ 0.92
SNRNP27-201ENST00000244227 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
SNRNP27-201ENST00000244227 CDK13Q14004 1512 aaKnown RBP20.74■□□□□ 0.91
SNRNP27-201ENST00000244227 NUP153P49790 1475 aaKnown RBP20.74■□□□□ 0.91
SNRNP27-201ENST00000244227 RAPGEF6Q8TEU7 1601 aa20.74■□□□□ 0.91
SNRNP27-201ENST00000244227 NCOA2Q15596 1464 aa20.72■□□□□ 0.91
SNRNP27-201ENST00000244227 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
SNRNP27-201ENST00000244227 PLB1Q6P1J6 1458 aa20.7■□□□□ 0.9
SNRNP27-201ENST00000244227 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
SNRNP27-201ENST00000244227 SUPT6HQ7KZ85 1726 aaKnown RBP20.69■□□□□ 0.9
SNRNP27-201ENST00000244227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNRNP27-201ENST00000244227 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
SNRNP27-201ENST00000244227 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
SNRNP27-201ENST00000244227 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
SNRNP27-201ENST00000244227 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
SNRNP27-201ENST00000244227 ITGAEP38570 1179 aa20.64■□□□□ 0.9
SNRNP27-201ENST00000244227 MYOM3Q5VTT5 1437 aa20.64■□□□□ 0.89
SNRNP27-201ENST00000244227 ABCA8O94911 1581 aa20.63■□□□□ 0.89
SNRNP27-201ENST00000244227 CLASP1Q7Z460 1538 aa20.6■□□□□ 0.89
SNRNP27-201ENST00000244227 PTPRGP23470 1445 aa20.58■□□□□ 0.89
SNRNP27-201ENST00000244227 CDK11AQ9UQ88 783 aaPredicted RBP20.55■□□□□ 0.88
SNRNP27-201ENST00000244227 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
SNRNP27-201ENST00000244227 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
SNRNP27-201ENST00000244227 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
SNRNP27-201ENST00000244227 ATP10BO94823 1461 aa20.53■□□□□ 0.88
SNRNP27-201ENST00000244227 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
SNRNP27-201ENST00000244227 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
SNRNP27-201ENST00000244227 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.87
SNRNP27-201ENST00000244227 SETD5Q9C0A6 1442 aa20.52■□□□□ 0.87
SNRNP27-201ENST00000244227 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
SNRNP27-201ENST00000244227 MIA2Q96PC5 1412 aa20.51■□□□□ 0.87
SNRNP27-201ENST00000244227 UACAQ9BZF9 1416 aa20.47■□□□□ 0.87
SNRNP27-201ENST00000244227 ADCY10Q96PN6 1610 aa20.46■□□□□ 0.87
SNRNP27-201ENST00000244227 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
SNRNP27-201ENST00000244227 KIF14Q15058 1648 aa20.44■□□□□ 0.86
SNRNP27-201ENST00000244227 PLEKHD1A6NEE1 506 aa20.43■□□□□ 0.86
SNRNP27-201ENST00000244227 ABCC2Q92887 1545 aa20.39■□□□□ 0.85
SNRNP27-201ENST00000244227 GPATCH8Q9UKJ3 1502 aaKnown RBP20.39■□□□□ 0.85
SNRNP27-201ENST00000244227 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
SNRNP27-201ENST00000244227 ABCC10Q5T3U5 1492 aa20.38■□□□□ 0.85
SNRNP27-201ENST00000244227 NAIPQ13075 1403 aa20.36■□□□□ 0.85
SNRNP27-201ENST00000244227 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
SNRNP27-201ENST00000244227 UHRF1BP1LA0JNW5 1464 aa20.33■□□□□ 0.85
SNRNP27-201ENST00000244227 ITSN2Q9NZM3 1697 aa20.33■□□□□ 0.85
SNRNP27-201ENST00000244227 CFDP1Q9UEE9 299 aaPredicted RBP20.32■□□□□ 0.84
SNRNP27-201ENST00000244227 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
SNRNP27-201ENST00000244227 ABCC5O15440 1437 aa20.31■□□□□ 0.84
SNRNP27-201ENST00000244227 DAPK1P53355 1430 aa20.31■□□□□ 0.84
SNRNP27-201ENST00000244227 AKNAQ7Z591 1439 aa20.3■□□□□ 0.84
SNRNP27-201ENST00000244227 OSCARQ8IYS5 282 aa20.3■□□□□ 0.84
SNRNP27-201ENST00000244227 CHIC2Q9UKJ5 165 aa20.3■□□□□ 0.84
SNRNP27-201ENST00000244227 DNMT1P26358 1616 aaKnown RBP20.3■□□□□ 0.84
SNRNP27-201ENST00000244227 CAMSAP2Q08AD1 1489 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms