RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 APLP2Q06481 763 aa34.25■■■■□ 3.07
GCA-201ENST00000233612 ZNF608Q9ULD9 1512 aaPredicted RBP34.23■■■■□ 3.07
GCA-201ENST00000233612 EFCAB5A4FU69 1503 aa34.23■■■■□ 3.07
GCA-201ENST00000233612 ADAMTS12P58397 1594 aa34.21■■■■□ 3.07
GCA-201ENST00000233612 EIF4G3O43432 1585 aaKnown RBP34.12■■■■□ 3.05
GCA-201ENST00000233612 MAP3K1Q13233 1512 aa34.08■■■■□ 3.05
GCA-201ENST00000233612 SAMD9Q5K651 1589 aa34.04■■■■□ 3.04
GCA-201ENST00000233612 TTBK1Q5TCY1 1321 aaPredicted RBP34■■■■□ 3.03
GCA-201ENST00000233612 MAGI1Q96QZ7 1491 aaPredicted RBP33.99■■■■□ 3.03
GCA-201ENST00000233612 SNAPC4Q5SXM2 1469 aa33.98■■■■□ 3.03
GCA-201ENST00000233612 FHOD3Q2V2M9 1422 aa33.94■■■■□ 3.02
GCA-201ENST00000233612 FMN1Q68DA7 1419 aa33.92■■■■□ 3.02
GCA-201ENST00000233612 IQGAP2Q13576 1575 aa33.91■■■■□ 3.02
GCA-201ENST00000233612 KANK4Q5T7N3 995 aaPredicted RBP33.9■■■■□ 3.02
GCA-201ENST00000233612 TIAM1Q13009 1591 aa33.89■■■■□ 3.02
GCA-201ENST00000233612 CASKIN1Q8WXD9 1431 aa33.89■■■■□ 3.02
GCA-201ENST00000233612 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
GCA-201ENST00000233612 FYCO1Q9BQS8 1478 aa33.89■■■■□ 3.02
GCA-201ENST00000233612 P3H3Q8IVL6 736 aa33.88■■■■□ 3.01
GCA-201ENST00000233612 PCF11O94913 1555 aaKnown RBP33.85■■■■□ 3.01
GCA-201ENST00000233612 SYNJ2O15056 1496 aa33.85■■■■□ 3.01
GCA-201ENST00000233612 KIAA0586Q9BVV6 1533 aa33.84■■■■□ 3.01
GCA-201ENST00000233612 UGGT2Q9NYU1 1516 aa33.82■■■■□ 3
GCA-201ENST00000233612 CFAP43Q8NDM7 1665 aa33.79■■■■□ 3
GCA-201ENST00000233612 ZEB1P37275 1124 aaPredicted RBP33.78■■■■□ 3
GCA-201ENST00000233612 LRRC9Q6ZRR7 1453 aa33.75■■■□□ 2.99
GCA-201ENST00000233612 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
GCA-201ENST00000233612 RRBP1Q9P2E9 1410 aaKnown RBP33.71■■■□□ 2.99
GCA-201ENST00000233612 NUP160Q12769 1436 aa33.67■■■□□ 2.98
GCA-201ENST00000233612 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
GCA-201ENST00000233612 DISP1Q96F81 1524 aa33.59■■■□□ 2.97
GCA-201ENST00000233612 KIAA0556O60303 1618 aa33.56■■■□□ 2.96
GCA-201ENST00000233612 ATP1B4Q9UN42 357 aaPredicted RBP33.54■■■□□ 2.96
GCA-201ENST00000233612 LRRIQ1Q96JM4 1722 aa33.53■■■□□ 2.96
GCA-201ENST00000233612 CCNB3Q8WWL7 1395 aa33.52■■■□□ 2.96
GCA-201ENST00000233612 FBLN2P98095 1184 aa33.48■■■□□ 2.95
GCA-201ENST00000233612 CCDC18Q5T9S5 1454 aa33.48■■■□□ 2.95
GCA-201ENST00000233612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.48■■■□□ 2.95
GCA-201ENST00000233612 HNRNPUL2Q1KMD3 747 aaKnown RBP33.48■■■□□ 2.95
GCA-201ENST00000233612 HECW1Q76N89 1606 aa33.48■■■□□ 2.95
GCA-201ENST00000233612 PHLDB1Q86UU1 1377 aa33.43■■■□□ 2.94
GCA-201ENST00000233612 CCER1Q8TC90 406 aaPredicted RBP33.42■■■□□ 2.94
GCA-201ENST00000233612 JPH4Q96JJ6 628 aa33.41■■■□□ 2.94
GCA-201ENST00000233612 CARMIL2Q6F5E8 1435 aa33.37■■■□□ 2.93
GCA-201ENST00000233612 EPRSP07814 1512 aaKnown RBP33.37■■■□□ 2.93
GCA-201ENST00000233612 MTUS2Q5JR59 1369 aa33.36■■■□□ 2.93
GCA-201ENST00000233612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.35■■■□□ 2.93
GCA-201ENST00000233612 EHBP1L1Q8N3D4 1523 aa33.35■■■□□ 2.93
GCA-201ENST00000233612 CHD1O14646 1710 aa33.31■■■□□ 2.92
GCA-201ENST00000233612 RAPGEF6Q8TEU7 1601 aa33.28■■■□□ 2.92
GCA-201ENST00000233612 SUPT6HQ7KZ85 1726 aaKnown RBP33.27■■■□□ 2.92
GCA-201ENST00000233612 ARHGEF11O15085 1522 aa33.26■■■□□ 2.91
GCA-201ENST00000233612 MAGI3Q5TCQ9 1506 aa33.25■■■□□ 2.91
GCA-201ENST00000233612 NCOA2Q15596 1464 aa33.23■■■□□ 2.91
GCA-201ENST00000233612 NUP153P49790 1475 aaKnown RBP33.22■■■□□ 2.91
GCA-201ENST00000233612 FGD6Q6ZV73 1430 aa33.19■■■□□ 2.9
GCA-201ENST00000233612 CDK13Q14004 1512 aaKnown RBP33.18■■■□□ 2.9
GCA-201ENST00000233612 MYOM3Q5VTT5 1437 aa33.15■■■□□ 2.9
GCA-201ENST00000233612 SHROOM2Q13796 1616 aa33.15■■■□□ 2.9
GCA-201ENST00000233612 PRG4Q92954 1404 aaPredicted RBP33.11■■■□□ 2.89
GCA-201ENST00000233612 ABCA8O94911 1581 aa33.1■■■□□ 2.89
GCA-201ENST00000233612 PLB1Q6P1J6 1458 aa33.09■■■□□ 2.89
GCA-201ENST00000233612 FAM50AQ14320 339 aaKnown RBP33.07■■■□□ 2.89
GCA-201ENST00000233612 CDK11AQ9UQ88 783 aaPredicted RBP33.07■■■□□ 2.88
GCA-201ENST00000233612 CLSPNQ9HAW4 1339 aa33.04■■■□□ 2.88
GCA-201ENST00000233612 MIA2Q96PC5 1412 aa33■■■□□ 2.87
GCA-201ENST00000233612 ITGAEP38570 1179 aa33■■■□□ 2.87
GCA-201ENST00000233612 TCOF1Q13428 1488 aaKnown RBP33■■■□□ 2.87
GCA-201ENST00000233612 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
GCA-201ENST00000233612 PTPRGP23470 1445 aa32.98■■■□□ 2.87
GCA-201ENST00000233612 SETD5Q9C0A6 1442 aa32.98■■■□□ 2.87
GCA-201ENST00000233612 DHX57Q6P158 1386 aaKnown RBP32.98■■■□□ 2.87
GCA-201ENST00000233612 PTPN23Q9H3S7 1636 aa32.97■■■□□ 2.87
GCA-201ENST00000233612 TROQ12816 1431 aaPredicted RBP32.96■■■□□ 2.87
GCA-201ENST00000233612 RAB3GAP2Q9H2M9 1393 aa32.91■■■□□ 2.86
GCA-201ENST00000233612 ARID3CA6NKF2 412 aa32.91■■■□□ 2.86
GCA-201ENST00000233612 ADCY10Q96PN6 1610 aa32.9■■■□□ 2.86
GCA-201ENST00000233612 ATP10BO94823 1461 aa32.89■■■□□ 2.86
GCA-201ENST00000233612 PTPRKQ15262 1439 aa32.83■■■□□ 2.85
GCA-201ENST00000233612 UACAQ9BZF9 1416 aa32.81■■■□□ 2.84
GCA-201ENST00000233612 ERCC6L2Q5T890 1561 aa32.78■■■□□ 2.84
GCA-201ENST00000233612 HFM1A2PYH4 1435 aa32.78■■■□□ 2.84
GCA-201ENST00000233612 PLEKHD1A6NEE1 506 aa32.78■■■□□ 2.84
GCA-201ENST00000233612 ITSN2Q9NZM3 1697 aa32.73■■■□□ 2.83
GCA-201ENST00000233612 AKNAQ7Z591 1439 aa32.71■■■□□ 2.83
GCA-201ENST00000233612 KIF14Q15058 1648 aa32.71■■■□□ 2.83
GCA-201ENST00000233612 GPATCH8Q9UKJ3 1502 aaKnown RBP32.71■■■□□ 2.83
GCA-201ENST00000233612 ABCC2Q92887 1545 aa32.7■■■□□ 2.83
GCA-201ENST00000233612 NAIPQ13075 1403 aa32.68■■■□□ 2.82
GCA-201ENST00000233612 ABCC10Q5T3U5 1492 aa32.68■■■□□ 2.82
GCA-201ENST00000233612 UHRF1BP1LA0JNW5 1464 aa32.66■■■□□ 2.82
GCA-201ENST00000233612 DNMT1P26358 1616 aaKnown RBP32.62■■■□□ 2.81
GCA-201ENST00000233612 MAPKBP1O60336 1514 aa32.6■■■□□ 2.81
GCA-201ENST00000233612 DAPK1P53355 1430 aa32.58■■■□□ 2.81
GCA-201ENST00000233612 ROCK1Q13464 1354 aa32.58■■■□□ 2.81
GCA-201ENST00000233612 GCC2Q8IWJ2 1684 aa32.58■■■□□ 2.81
GCA-201ENST00000233612 CFDP1Q9UEE9 299 aaPredicted RBP32.58■■■□□ 2.81
GCA-201ENST00000233612 CDC42BPAQ5VT25 1732 aa32.56■■■□□ 2.8
GCA-201ENST00000233612 ABCC5O15440 1437 aa32.56■■■□□ 2.8
GCA-201ENST00000233612 CAMSAP2Q08AD1 1489 aa32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms