RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 NACADO15069 1562 aa18.12■□□□□ 0.49
LAMB1-201ENST00000222399 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
LAMB1-201ENST00000222399 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
LAMB1-201ENST00000222399 KIF27Q86VH2 1401 aa18.08■□□□□ 0.48
LAMB1-201ENST00000222399 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
LAMB1-201ENST00000222399 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
LAMB1-201ENST00000222399 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
LAMB1-201ENST00000222399 MIER1Q8N108 512 aa18.04■□□□□ 0.48
LAMB1-201ENST00000222399 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
LAMB1-201ENST00000222399 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
LAMB1-201ENST00000222399 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.47
LAMB1-201ENST00000222399 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
LAMB1-201ENST00000222399 CDCA8Q53HL2 280 aa18■□□□□ 0.47
LAMB1-201ENST00000222399 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
LAMB1-201ENST00000222399 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
LAMB1-201ENST00000222399 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
LAMB1-201ENST00000222399 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
LAMB1-201ENST00000222399 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
LAMB1-201ENST00000222399 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
LAMB1-201ENST00000222399 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
LAMB1-201ENST00000222399 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
LAMB1-201ENST00000222399 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
LAMB1-201ENST00000222399 NBR1Q14596 966 aa17.89■□□□□ 0.46
LAMB1-201ENST00000222399 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
LAMB1-201ENST00000222399 DDRGK1Q96HY6 314 aa17.88■□□□□ 0.45
LAMB1-201ENST00000222399 EIF5BO60841 1220 aaKnown RBP17.87■□□□□ 0.45
LAMB1-201ENST00000222399 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
LAMB1-201ENST00000222399 BECN1Q14457 450 aa17.87■□□□□ 0.45
LAMB1-201ENST00000222399 A0A0G2JS52 829 aa17.86■□□□□ 0.45
LAMB1-201ENST00000222399 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
LAMB1-201ENST00000222399 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
LAMB1-201ENST00000222399 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.45
LAMB1-201ENST00000222399 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
LAMB1-201ENST00000222399 PLEKHG5O94827 1062 aa17.8■□□□□ 0.44
LAMB1-201ENST00000222399 ARXQ96QS3 562 aa17.79■□□□□ 0.44
LAMB1-201ENST00000222399 NCLP19338 710 aaKnown RBP17.78■□□□□ 0.44
LAMB1-201ENST00000222399 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
LAMB1-201ENST00000222399 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
LAMB1-201ENST00000222399 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
LAMB1-201ENST00000222399 PPM1GO15355 546 aaPredicted RBP17.76■□□□□ 0.43
LAMB1-201ENST00000222399 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
LAMB1-201ENST00000222399 FTSJ3Q8IY81 847 aaKnown RBP17.76■□□□□ 0.43
LAMB1-201ENST00000222399 POGKQ9P215 609 aa17.75■□□□□ 0.43
LAMB1-201ENST00000222399 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
LAMB1-201ENST00000222399 GOLGA6L22H0YM25 854 aa17.74■□□□□ 0.43
LAMB1-201ENST00000222399 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
LAMB1-201ENST00000222399 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
LAMB1-201ENST00000222399 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
LAMB1-201ENST00000222399 GLIPR1L2Q4G1C9 344 aa17.72■□□□□ 0.43
LAMB1-201ENST00000222399 CUX2O14529 1486 aa17.71■□□□□ 0.43
LAMB1-201ENST00000222399 KANK1Q14678 1352 aa17.71■□□□□ 0.43
LAMB1-201ENST00000222399 CDK11BP21127 795 aaKnown RBP17.7■□□□□ 0.42
LAMB1-201ENST00000222399 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
LAMB1-201ENST00000222399 CHMP4BQ9H444 224 aaKnown RBP17.68■□□□□ 0.42
LAMB1-201ENST00000222399 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
LAMB1-201ENST00000222399 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
LAMB1-201ENST00000222399 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
LAMB1-201ENST00000222399 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
LAMB1-201ENST00000222399 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
LAMB1-201ENST00000222399 TMF1P82094 1093 aa17.67■□□□□ 0.42
LAMB1-201ENST00000222399 MS4A1P11836 297 aa17.65■□□□□ 0.42
LAMB1-201ENST00000222399 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
LAMB1-201ENST00000222399 SENP3-EIF4A1A0A087X0R7 540 aa17.64■□□□□ 0.41
LAMB1-201ENST00000222399 CC2D1BQ5T0F9 858 aaKnown RBP17.64■□□□□ 0.41
LAMB1-201ENST00000222399 TRIM44Q96DX7 344 aaPredicted RBP17.63■□□□□ 0.41
LAMB1-201ENST00000222399 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
LAMB1-201ENST00000222399 SOGA1O94964 1423 aa17.62■□□□□ 0.41
LAMB1-201ENST00000222399 HDGFP51858 240 aaKnown RBP17.62■□□□□ 0.41
LAMB1-201ENST00000222399 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
LAMB1-201ENST00000222399 TNNT2P45379 298 aaPredicted RBP17.6■□□□□ 0.41
LAMB1-201ENST00000222399 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
LAMB1-201ENST00000222399 SETD5Q9C0A6 1442 aa17.59■□□□□ 0.41
LAMB1-201ENST00000222399 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
LAMB1-201ENST00000222399 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
LAMB1-201ENST00000222399 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
LAMB1-201ENST00000222399 VPS8Q8N3P4 1428 aa17.57■□□□□ 0.4
LAMB1-201ENST00000222399 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
LAMB1-201ENST00000222399 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
LAMB1-201ENST00000222399 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
LAMB1-201ENST00000222399 RGS3P49796 1198 aa17.53■□□□□ 0.4
LAMB1-201ENST00000222399 CCER2I3L3R5 266 aa17.52■□□□□ 0.39
LAMB1-201ENST00000222399 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
LAMB1-201ENST00000222399 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
LAMB1-201ENST00000222399 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
LAMB1-201ENST00000222399 PTMAP06454 111 aaKnown RBP17.5■□□□□ 0.39
LAMB1-201ENST00000222399 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
LAMB1-201ENST00000222399 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
LAMB1-201ENST00000222399 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
LAMB1-201ENST00000222399 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
LAMB1-201ENST00000222399 PKD2Q13563 968 aa17.48■□□□□ 0.39
LAMB1-201ENST00000222399 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
LAMB1-201ENST00000222399 MLECQ14165 292 aa17.46■□□□□ 0.38
LAMB1-201ENST00000222399 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
LAMB1-201ENST00000222399 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
LAMB1-201ENST00000222399 NPHP1O15259 732 aa17.45■□□□□ 0.38
LAMB1-201ENST00000222399 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
LAMB1-201ENST00000222399 GGT6Q6P531 493 aa17.43■□□□□ 0.38
LAMB1-201ENST00000222399 FGD1P98174 961 aa17.42■□□□□ 0.38
LAMB1-201ENST00000222399 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
LAMB1-201ENST00000222399 KCNJ4P48050 445 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms