RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 MAP3K1Q13233 1512 aa26.88■■□□□ 1.89
GCDH-201ENST00000222214 ERCC6Q03468 1493 aa26.86■■□□□ 1.89
GCDH-201ENST00000222214 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
GCDH-201ENST00000222214 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
GCDH-201ENST00000222214 ADAMTS12P58397 1594 aa26.77■■□□□ 1.88
GCDH-201ENST00000222214 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.871e-6■■■■■ 36.8
GCDH-201ENST00000222214 TIAM1Q13009 1591 aa26.76■■□□□ 1.87
GCDH-201ENST00000222214 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
GCDH-201ENST00000222214 SAMD9Q5K651 1589 aa26.73■■□□□ 1.87
GCDH-201ENST00000222214 CCER1Q8TC90 406 aaPredicted RBP26.71■■□□□ 1.87
GCDH-201ENST00000222214 FYCO1Q9BQS8 1478 aa26.71■■□□□ 1.87
GCDH-201ENST00000222214 FMN1Q68DA7 1419 aa26.7■■□□□ 1.87
GCDH-201ENST00000222214 PCF11O94913 1555 aaKnown RBP26.69■■□□□ 1.86
GCDH-201ENST00000222214 FHOD3Q2V2M9 1422 aa26.69■■□□□ 1.86
GCDH-201ENST00000222214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.69■■□□□ 1.86
GCDH-201ENST00000222214 CFAP43Q8NDM7 1665 aa26.68■■□□□ 1.86
GCDH-201ENST00000222214 CASKIN1Q8WXD9 1431 aa26.67■■□□□ 1.86
GCDH-201ENST00000222214 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
GCDH-201ENST00000222214 RRBP1Q9P2E9 1410 aaKnown RBP26.66■■□□□ 1.86
GCDH-201ENST00000222214 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
GCDH-201ENST00000222214 LRRC9Q6ZRR7 1453 aa26.62■■□□□ 1.85
GCDH-201ENST00000222214 P3H3Q8IVL6 736 aa26.62■■□□□ 1.85
GCDH-201ENST00000222214 IQGAP2Q13576 1575 aa26.6■■□□□ 1.85
GCDH-201ENST00000222214 HNRNPUL2Q1KMD3 747 aaKnown RBP26.57■■□□□ 1.84
GCDH-201ENST00000222214 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
GCDH-201ENST00000222214 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
GCDH-201ENST00000222214 CCNB3Q8WWL7 1395 aa26.53■■□□□ 1.84
GCDH-201ENST00000222214 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
GCDH-201ENST00000222214 GRIN2AQ12879 1464 aa26.48■■□□□ 1.83
GCDH-201ENST00000222214 KIAA0586Q9BVV6 1533 aa26.47■■□□□ 1.83
GCDH-201ENST00000222214 ATP1B4Q9UN42 357 aaPredicted RBP26.44■■□□□ 1.82
GCDH-201ENST00000222214 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
GCDH-201ENST00000222214 CCDC18Q5T9S5 1454 aa26.38■■□□□ 1.81
GCDH-201ENST00000222214 PHLDB1Q86UU1 1377 aa26.36■■□□□ 1.81
GCDH-201ENST00000222214 HECW1Q76N89 1606 aa26.36■■□□□ 1.81
GCDH-201ENST00000222214 LRRIQ1Q96JM4 1722 aa26.34■■□□□ 1.81
GCDH-201ENST00000222214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.32■■□□□ 1.8
GCDH-201ENST00000222214 MTUS2Q5JR59 1369 aa26.32■■□□□ 1.8
GCDH-201ENST00000222214 KIAA0556O60303 1618 aa26.31■■□□□ 1.8
GCDH-201ENST00000222214 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
GCDH-201ENST00000222214 EHBP1L1Q8N3D4 1523 aa26.3■■□□□ 1.8
GCDH-201ENST00000222214 CLSPNQ9HAW4 1339 aa26.3■■□□□ 1.8
GCDH-201ENST00000222214 DISP1Q96F81 1524 aa26.27■■□□□ 1.8
GCDH-201ENST00000222214 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
GCDH-201ENST00000222214 NUP160Q12769 1436 aa26.26■■□□□ 1.8
GCDH-201ENST00000222214 SUPT6HQ7KZ85 1726 aaKnown RBP26.25■■□□□ 1.79
GCDH-201ENST00000222214 EPRSP07814 1512 aaKnown RBP26.21■■□□□ 1.79
GCDH-201ENST00000222214 FGD6Q6ZV73 1430 aa26.19■■□□□ 1.78
GCDH-201ENST00000222214 NCOA2Q15596 1464 aa26.18■■□□□ 1.78
GCDH-201ENST00000222214 DHX57Q6P158 1386 aaKnown RBP26.17■■□□□ 1.78
GCDH-201ENST00000222214 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
GCDH-201ENST00000222214 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
GCDH-201ENST00000222214 CARMIL2Q6F5E8 1435 aa26.15■■□□□ 1.78
GCDH-201ENST00000222214 MYOM3Q5VTT5 1437 aa26.14■■□□□ 1.78
GCDH-201ENST00000222214 FBLN2P98095 1184 aa26.14■■□□□ 1.77
GCDH-201ENST00000222214 RAPGEF6Q8TEU7 1601 aa26.13■■□□□ 1.77
GCDH-201ENST00000222214 ITGAEP38570 1179 aa26.13■■□□□ 1.77
GCDH-201ENST00000222214 SETD5Q9C0A6 1442 aa26.11■■□□□ 1.77
GCDH-201ENST00000222214 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
GCDH-201ENST00000222214 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.76
GCDH-201ENST00000222214 CDK13Q14004 1512 aaKnown RBP26.07■■□□□ 1.76
GCDH-201ENST00000222214 JPH4Q96JJ6 628 aa26.07■■□□□ 1.76
GCDH-201ENST00000222214 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
GCDH-201ENST00000222214 PTPN23Q9H3S7 1636 aa26.01■■□□□ 1.75
GCDH-201ENST00000222214 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
GCDH-201ENST00000222214 TCOF1Q13428 1488 aaKnown RBP25.99■■□□□ 1.75
GCDH-201ENST00000222214 MIA2Q96PC5 1412 aa25.99■■□□□ 1.75
GCDH-201ENST00000222214 CHD1O14646 1710 aa25.96■■□□□ 1.75
GCDH-201ENST00000222214 PLB1Q6P1J6 1458 aa25.91■■□□□ 1.74
GCDH-201ENST00000222214 HFM1A2PYH4 1435 aa25.91■■□□□ 1.74
GCDH-201ENST00000222214 ABCA8O94911 1581 aa25.9■■□□□ 1.74
GCDH-201ENST00000222214 TROQ12816 1431 aaPredicted RBP25.88■■□□□ 1.73
GCDH-201ENST00000222214 ZNF316A6NFI3 1004 aaPredicted RBP25.85■■□□□ 1.73
GCDH-201ENST00000222214 PRG4Q92954 1404 aaPredicted RBP25.85■■□□□ 1.73
GCDH-201ENST00000222214 MAPKBP1O60336 1514 aa25.85■■□□□ 1.73
GCDH-201ENST00000222214 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
GCDH-201ENST00000222214 ADCY10Q96PN6 1610 aa25.84■■□□□ 1.73
GCDH-201ENST00000222214 PTPRKQ15262 1439 aa25.84■■□□□ 1.73
GCDH-201ENST00000222214 AKNAQ7Z591 1439 aa25.83■■□□□ 1.73
GCDH-201ENST00000222214 ARID3CA6NKF2 412 aa25.83■■□□□ 1.73
GCDH-201ENST00000222214 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
GCDH-201ENST00000222214 NAIPQ13075 1403 aa25.78■■□□□ 1.72
GCDH-201ENST00000222214 PTPRGP23470 1445 aa25.77■■□□□ 1.72
GCDH-201ENST00000222214 GCC2Q8IWJ2 1684 aa25.76■■□□□ 1.71
GCDH-201ENST00000222214 UACAQ9BZF9 1416 aa25.74■■□□□ 1.71
GCDH-201ENST00000222214 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
GCDH-201ENST00000222214 ACIN1Q9UKV3 1341 aaKnown RBP25.72■■□□□ 1.71
GCDH-201ENST00000222214 ATP10BO94823 1461 aa25.72■■□□□ 1.71
GCDH-201ENST00000222214 DNMT1P26358 1616 aaKnown RBP25.71■■□□□ 1.71
GCDH-201ENST00000222214 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.7
GCDH-201ENST00000222214 TIMELESSQ9UNS1 1208 aa25.7■■□□□ 1.7
GCDH-201ENST00000222214 KIF14Q15058 1648 aa25.69■■□□□ 1.7
GCDH-201ENST00000222214 ROCK1Q13464 1354 aa25.68■■□□□ 1.7
GCDH-201ENST00000222214 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
GCDH-201ENST00000222214 DAPK1P53355 1430 aa25.67■■□□□ 1.7
GCDH-201ENST00000222214 GPATCH8Q9UKJ3 1502 aaKnown RBP25.66■■□□□ 1.7
GCDH-201ENST00000222214 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
GCDH-201ENST00000222214 CAMSAP2Q08AD1 1489 aa25.61■■□□□ 1.69
GCDH-201ENST00000222214 ABCC5O15440 1437 aa25.61■■□□□ 1.69
GCDH-201ENST00000222214 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms