RNA–Protein interactions for RNA: ENST00000221576.4

C19orf53-201, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-201ENST00000221576 SHROOM2Q13796 1616 aa10.77□□□□□ -0.68
C19orf53-201ENST00000221576 TTBK1Q5TCY1 1321 aaPredicted RBP10.72□□□□□ -0.69
C19orf53-201ENST00000221576 KIF13AQ9H1H9 1805 aa10.7□□□□□ -0.7
C19orf53-201ENST00000221576 RUSC2Q8N2Y8 1516 aa10.69□□□□□ -0.7
C19orf53-201ENST00000221576 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
C19orf53-201ENST00000221576 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
C19orf53-201ENST00000221576 KIAA0586Q9BVV6 1533 aa10.67□□□□□ -0.7
C19orf53-201ENST00000221576 MAPKBP1O60336 1514 aa10.66□□□□□ -0.7
C19orf53-201ENST00000221576 PTPRGP23470 1445 aa10.65□□□□□ -0.7
C19orf53-201ENST00000221576 KDM6BO15054 1643 aa10.64□□□□□ -0.71
C19orf53-201ENST00000221576 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
C19orf53-201ENST00000221576 DIP2BQ9P265 1576 aa10.64□□□□□ -0.71
C19orf53-201ENST00000221576 IGF1RP08069 1367 aa10.64□□□□□ -0.71
C19orf53-201ENST00000221576 ADCY10Q96PN6 1610 aa10.63□□□□□ -0.71
C19orf53-201ENST00000221576 CUL7Q14999 1698 aa10.63□□□□□ -0.71
C19orf53-201ENST00000221576 CARMIL1Q5VZK9 1371 aa10.62□□□□□ -0.71
C19orf53-201ENST00000221576 TSPOAP1O95153 1857 aa10.61□□□□□ -0.71
C19orf53-201ENST00000221576 TNIKQ9UKE5 1360 aa10.6□□□□□ -0.71
C19orf53-201ENST00000221576 KDM4FA0A1W2PPD8 638 aa10.57□□□□□ -0.72
C19orf53-201ENST00000221576 PLB1Q6P1J6 1458 aa10.56□□□□□ -0.72
C19orf53-201ENST00000221576 ABCC2Q92887 1545 aa10.56□□□□□ -0.72
C19orf53-201ENST00000221576 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
C19orf53-201ENST00000221576 IQGAP2Q13576 1575 aa10.55□□□□□ -0.72
C19orf53-201ENST00000221576 UACAQ9BZF9 1416 aa10.53□□□□□ -0.72
C19orf53-201ENST00000221576 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
C19orf53-201ENST00000221576 UHRF1BP1LA0JNW5 1464 aa10.5□□□□□ -0.73
C19orf53-201ENST00000221576 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
C19orf53-201ENST00000221576 GLI2P10070 1586 aa10.49□□□□□ -0.73
C19orf53-201ENST00000221576 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
C19orf53-201ENST00000221576 ADGRL1O94910 1474 aa10.47□□□□□ -0.73
C19orf53-201ENST00000221576 EPRSP07814 1512 aaKnown RBP10.47□□□□□ -0.73
C19orf53-201ENST00000221576 KCNH8Q96L42 1107 aa10.46□□□□□ -0.73
C19orf53-201ENST00000221576 DISP1Q96F81 1524 aa10.46□□□□□ -0.74
C19orf53-201ENST00000221576 KDM5BQ9UGL1 1544 aa10.45□□□□□ -0.74
C19orf53-201ENST00000221576 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
C19orf53-201ENST00000221576 ILDR1Q86SU0 546 aaPredicted RBP10.44□□□□□ -0.74
C19orf53-201ENST00000221576 ZCCHC11Q5TAX3 1644 aaKnown RBP10.44□□□□□ -0.74
C19orf53-201ENST00000221576 PPRC1Q5VV67 1664 aaKnown RBP10.43□□□□□ -0.74
C19orf53-201ENST00000221576 KIAA0556O60303 1618 aa10.43□□□□□ -0.74
C19orf53-201ENST00000221576 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
C19orf53-201ENST00000221576 WDR7Q9Y4E6 1490 aa10.42□□□□□ -0.74
C19orf53-201ENST00000221576 MAP3K4Q9Y6R4 1608 aa10.42□□□□□ -0.74
C19orf53-201ENST00000221576 COL17A1Q9UMD9 1497 aaPredicted RBP10.41□□□□□ -0.74
C19orf53-201ENST00000221576 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
C19orf53-201ENST00000221576 ARID3CA6NKF2 412 aa10.38□□□□□ -0.75
C19orf53-201ENST00000221576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
C19orf53-201ENST00000221576 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
C19orf53-201ENST00000221576 CTTNBP2Q8WZ74 1663 aa10.37□□□□□ -0.75
C19orf53-201ENST00000221576 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
C19orf53-201ENST00000221576 HECW2Q9P2P5 1572 aa10.35□□□□□ -0.75
C19orf53-201ENST00000221576 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
C19orf53-201ENST00000221576 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
C19orf53-201ENST00000221576 ABCA8O94911 1581 aa10.33□□□□□ -0.76
C19orf53-201ENST00000221576 ARID4BQ4LE39 1312 aaPredicted RBP10.32□□□□□ -0.76
C19orf53-201ENST00000221576 RANGAP1P46060 587 aaPredicted RBP10.31□□□□□ -0.76
C19orf53-201ENST00000221576 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
C19orf53-201ENST00000221576 PRXQ9BXM0 1461 aa10.29□□□□□ -0.76
C19orf53-201ENST00000221576 KIF21BO75037 1637 aa10.28□□□□□ -0.76
C19orf53-201ENST00000221576 RAPGEF3O95398 923 aa10.27□□□□□ -0.77
C19orf53-201ENST00000221576 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
C19orf53-201ENST00000221576 ATP10BO94823 1461 aa10.27□□□□□ -0.77
C19orf53-201ENST00000221576 ARAP3Q8WWN8 1544 aa10.27□□□□□ -0.77
C19orf53-201ENST00000221576 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
C19orf53-201ENST00000221576 PLPPR3Q6T4P5 718 aa10.25□□□□□ -0.77
C19orf53-201ENST00000221576 NEO1Q92859 1461 aa10.23□□□□□ -0.77
C19orf53-201ENST00000221576 FBXO41Q8TF61 875 aa10.23□□□□□ -0.77
C19orf53-201ENST00000221576 PTPRMP28827 1452 aa10.23□□□□□ -0.77
C19orf53-201ENST00000221576 ABCA9Q8IUA7 1624 aa10.22□□□□□ -0.77
C19orf53-201ENST00000221576 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
C19orf53-201ENST00000221576 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
C19orf53-201ENST00000221576 POGZQ7Z3K3 1410 aa10.19□□□□□ -0.78
C19orf53-201ENST00000221576 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
C19orf53-201ENST00000221576 DENND4BO75064 1496 aaPredicted RBP10.18□□□□□ -0.78
C19orf53-201ENST00000221576 FHOD3Q2V2M9 1422 aa10.18□□□□□ -0.78
C19orf53-201ENST00000221576 EEA1Q15075 1411 aa10.17□□□□□ -0.78
C19orf53-201ENST00000221576 MLECQ14165 292 aa10.17□□□□□ -0.78
C19orf53-201ENST00000221576 ADAMTSL3P82987 1691 aa10.17□□□□□ -0.78
C19orf53-201ENST00000221576 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
C19orf53-201ENST00000221576 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
C19orf53-201ENST00000221576 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
C19orf53-201ENST00000221576 FANCAO15360 1455 aa10.16□□□□□ -0.78
C19orf53-201ENST00000221576 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
C19orf53-201ENST00000221576 MADDQ8WXG6 1647 aa10.15□□□□□ -0.78
C19orf53-201ENST00000221576 PCF11O94913 1555 aaKnown RBP10.15□□□□□ -0.78
C19orf53-201ENST00000221576 CFAP74Q9C0B2 1584 aa10.15□□□□□ -0.78
C19orf53-201ENST00000221576 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
C19orf53-201ENST00000221576 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
C19orf53-201ENST00000221576 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
C19orf53-201ENST00000221576 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
C19orf53-201ENST00000221576 RIMS1Q86UR5 1692 aaKnown RBP10.13□□□□□ -0.79
C19orf53-201ENST00000221576 HSPA2P54652 639 aa10.13□□□□□ -0.79
C19orf53-201ENST00000221576 FRMPD1Q5SYB0 1578 aa10.12□□□□□ -0.79
C19orf53-201ENST00000221576 EFCAB5A4FU69 1503 aa10.12□□□□□ -0.79
C19orf53-201ENST00000221576 ZFYVE16Q7Z3T8 1539 aa10.12□□□□□ -0.79
C19orf53-201ENST00000221576 LMTK3Q96Q04 1460 aa10.11□□□□□ -0.79
C19orf53-201ENST00000221576 EFCAB2Q5VUJ9 269 aa10.11□□□□□ -0.79
C19orf53-201ENST00000221576 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.11□□□□□ -0.79
C19orf53-201ENST00000221576 SCAPERQ9BY12 1400 aa10.1□□□□□ -0.79
C19orf53-201ENST00000221576 MAGI2Q86UL8 1455 aa10.1□□□□□ -0.79
C19orf53-201ENST00000221576 ESF1Q9H501 851 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms