RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 MS4A1P11836 297 aa7.66□□□□□ -1.18
CBX5-201ENST00000209875 HAP1P54257 671 aaPredicted RBP7.66□□□□□ -1.18
CBX5-201ENST00000209875 RSPH4AQ5TD94 716 aa7.66□□□□□ -1.18
CBX5-201ENST00000209875 VPS8Q8N3P4 1428 aa7.66□□□□□ -1.18
CBX5-201ENST00000209875 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
CBX5-201ENST00000209875 WDR43Q15061 677 aaKnown RBP eCLIP7.64□□□□□ -1.19
CBX5-201ENST00000209875 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
CBX5-201ENST00000209875 CARMIL2Q6F5E8 1435 aa7.64□□□□□ -1.19
CBX5-201ENST00000209875 TRIM44Q96DX7 344 aaPredicted RBP7.64□□□□□ -1.19
CBX5-201ENST00000209875 HSP90AA1P07900 732 aaKnown RBP7.63□□□□□ -1.19
CBX5-201ENST00000209875 CFAP53Q96M91 514 aa7.63□□□□□ -1.19
CBX5-201ENST00000209875 TOP2AP11388 1531 aaKnown RBP7.63□□□□□ -1.19
CBX5-201ENST00000209875 PNNQ9H307 717 aaKnown RBP7.63□□□□□ -1.19
CBX5-201ENST00000209875 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
CBX5-201ENST00000209875 CHMP4AQ9BY43 222 aa7.63□□□□□ -1.19
CBX5-201ENST00000209875 CCER2I3L3R5 266 aa7.62□□□□□ -1.19
CBX5-201ENST00000209875 STAG3Q9UJ98 1225 aa7.62□□□□□ -1.19
CBX5-201ENST00000209875 CCNB3Q8WWL7 1395 aa7.62□□□□□ -1.19
CBX5-201ENST00000209875 CARMIL1Q5VZK9 1371 aa7.62□□□□□ -1.19
CBX5-201ENST00000209875 HDGFP51858 240 aaKnown RBP7.62□□□□□ -1.19
CBX5-201ENST00000209875 P3H3Q8IVL6 736 aa7.62□□□□□ -1.19
CBX5-201ENST00000209875 CFDP1Q9UEE9 299 aaPredicted RBP7.61□□□□□ -1.19
CBX5-201ENST00000209875 NCLP19338 710 aaKnown RBP7.6□□□□□ -1.19
CBX5-201ENST00000209875 HNRNPUQ00839 825 aaKnown RBP eCLIP7.6□□□□□ -1.19
CBX5-201ENST00000209875 BCANQ96GW7 911 aa7.6□□□□□ -1.19
CBX5-201ENST00000209875 KANK1Q14678 1352 aa7.6□□□□□ -1.19
CBX5-201ENST00000209875 MYH16Q9H6N6 1097 aa7.6□□□□□ -1.19
CBX5-201ENST00000209875 STAC3Q96MF2 364 aa7.59□□□□□ -1.19
CBX5-201ENST00000209875 MRS2Q9HD23 443 aa7.58□□□□□ -1.2
CBX5-201ENST00000209875 BECN1Q14457 450 aa7.58□□□□□ -1.2
CBX5-201ENST00000209875 CCDC136Q96JN2 1154 aa7.57□□□□□ -1.2
CBX5-201ENST00000209875 ROCK2O75116 1388 aaKnown RBP7.57□□□□□ -1.2
CBX5-201ENST00000209875 ARHGAP35Q9NRY4 1499 aa7.57□□□□□ -1.2
CBX5-201ENST00000209875 NUDCQ9Y266 331 aa7.56□□□□□ -1.2
CBX5-201ENST00000209875 GOLGA6L22H0YM25 854 aa7.56□□□□□ -1.2
CBX5-201ENST00000209875 CADPSQ9ULU8 1353 aa7.56□□□□□ -1.2
CBX5-201ENST00000209875 CUX2O14529 1486 aa7.55□□□□□ -1.2
CBX5-201ENST00000209875 SETD5Q9C0A6 1442 aa7.55□□□□□ -1.2
CBX5-201ENST00000209875 NGEFQ8N5V2 710 aa7.55□□□□□ -1.2
CBX5-201ENST00000209875 PPM1GO15355 546 aaPredicted RBP7.54□□□□□ -1.2
CBX5-201ENST00000209875 KNSTRNQ9Y448 316 aa7.54□□□□□ -1.2
CBX5-201ENST00000209875 FKBP8Q14318 412 aa7.54□□□□□ -1.2
CBX5-201ENST00000209875 DDX10Q13206 875 aaKnown RBP7.54□□□□□ -1.2
CBX5-201ENST00000209875 CCDC88BA6NC98 1476 aa7.53□□□□□ -1.2
CBX5-201ENST00000209875 RAPGEF2Q9Y4G8 1499 aa7.53□□□□□ -1.2
CBX5-201ENST00000209875 PHLDB1Q86UU1 1377 aa7.52□□□□□ -1.21
CBX5-201ENST00000209875 CECR2Q9BXF3 1484 aa7.52□□□□□ -1.21
CBX5-201ENST00000209875 ERCC6Q03468 1493 aa7.52□□□□□ -1.21
CBX5-201ENST00000209875 ANKRD30AQ9BXX3 1397 aa7.52□□□□□ -1.21
CBX5-201ENST00000209875 EIF3AQ14152 1382 aaKnown RBP7.51□□□□□ -1.21
CBX5-201ENST00000209875 GON4LQ3T8J9 2241 aa7.51□□□□□ -1.21
CBX5-201ENST00000209875 CCDC18Q5T9S5 1454 aa7.51□□□□□ -1.21
CBX5-201ENST00000209875 CASC1Q6TDU7 716 aa7.51□□□□□ -1.21
CBX5-201ENST00000209875 MROH2BQ7Z745 1585 aa7.5□□□□□ -1.21
CBX5-201ENST00000209875 TMF1P82094 1093 aa7.5□□□□□ -1.21
CBX5-201ENST00000209875 CALD1Q05682 793 aaKnown RBP7.5□□□□□ -1.21
CBX5-201ENST00000209875 PTMSP20962 102 aa7.5□□□□□ -1.21
CBX5-201ENST00000209875 CHGAP10645 457 aaKnown RBP7.5□□□□□ -1.21
CBX5-201ENST00000209875 RALBP1Q15311 655 aa7.5□□□□□ -1.21
CBX5-201ENST00000209875 HDAC5Q9UQL6 1122 aa7.5□□□□□ -1.21
CBX5-201ENST00000209875 NPM2Q86SE8 214 aaKnown RBP7.49□□□□□ -1.21
CBX5-201ENST00000209875 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
CBX5-201ENST00000209875 CDK11BP21127 795 aaKnown RBP7.49□□□□□ -1.21
CBX5-201ENST00000209875 PPP4R2Q9NY27 417 aa7.49□□□□□ -1.21
CBX5-201ENST00000209875 CHIC2Q9UKJ5 165 aa7.49□□□□□ -1.21
CBX5-201ENST00000209875 ATAD2BQ9ULI0 1458 aa7.49□□□□□ -1.21
CBX5-201ENST00000209875 PPP1R15AO75807 674 aaPredicted RBP7.48□□□□□ -1.21
CBX5-201ENST00000209875 FAM9BQ8IZU0 186 aa7.48□□□□□ -1.21
CBX5-201ENST00000209875 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
CBX5-201ENST00000209875 CNGB1Q14028 1251 aaPredicted RBP7.48□□□□□ -1.21
CBX5-201ENST00000209875 SOGA1O94964 1423 aa7.48□□□□□ -1.21
CBX5-201ENST00000209875 EFCAB2Q5VUJ9 269 aa7.47□□□□□ -1.21
CBX5-201ENST00000209875 UACAQ9BZF9 1416 aa7.47□□□□□ -1.21
CBX5-201ENST00000209875 MAPK8IP3Q9UPT6 1336 aa7.47□□□□□ -1.21
CBX5-201ENST00000209875 NCAPD3P42695 1498 aa7.46□□□□□ -1.21
CBX5-201ENST00000209875 GOLGA6L6A8MZA4 724 aa7.46□□□□□ -1.22
CBX5-201ENST00000209875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.45□□□□□ -1.228e-7■■□□□ 12.5
CBX5-201ENST00000209875 RRP7BPQ9NSQ0 103 aa7.44□□□□□ -1.22
CBX5-201ENST00000209875 SMARCA4P51532 1647 aa7.44□□□□□ -1.22
CBX5-201ENST00000209875 AAMPQ13685 434 aa7.43□□□□□ -1.22
CBX5-201ENST00000209875 NBR1Q14596 966 aa7.43□□□□□ -1.22
CBX5-201ENST00000209875 NRDCO43847 1150 aa7.43□□□□□ -1.22
CBX5-201ENST00000209875 CHAF1AQ13111 956 aaPredicted RBP7.43□□□□□ -1.22
CBX5-201ENST00000209875 L1TD1Q5T7N2 865 aaKnown RBP7.43□□□□□ -1.22
CBX5-201ENST00000209875 KTN1Q86UP2 1357 aaKnown RBP7.43□□□□□ -1.22
CBX5-201ENST00000209875 ARID3CA6NKF2 412 aa7.43□□□□□ -1.22
CBX5-201ENST00000209875 IPO8O15397 1037 aaKnown RBP7.42□□□□□ -1.22
CBX5-201ENST00000209875 SCAF1Q9H7N4 1312 aaKnown RBP7.42□□□□□ -1.22
CBX5-201ENST00000209875 MIER1Q8N108 512 aa7.42□□□□□ -1.22
CBX5-201ENST00000209875 CUX1P39880 1505 aa7.41□□□□□ -1.22
CBX5-201ENST00000209875 CHMP4CQ96CF2 233 aa7.41□□□□□ -1.22
CBX5-201ENST00000209875 ERICH3Q5RHP9 1530 aa7.41□□□□□ -1.22
CBX5-201ENST00000209875 ZRSR1Q15695 479 aaKnown RBP7.4□□□□□ -1.22
CBX5-201ENST00000209875 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
CBX5-201ENST00000209875 NOP58Q9Y2X3 529 aaKnown RBP7.39□□□□□ -1.23
CBX5-201ENST00000209875 FTSJ3Q8IY81 847 aaKnown RBP7.39□□□□□ -1.23
CBX5-201ENST00000209875 LMOD3Q0VAK6 560 aa7.38□□□□□ -1.23
CBX5-201ENST00000209875 POGKQ9P215 609 aa7.38□□□□□ -1.23
CBX5-201ENST00000209875 HDGFL2Q7Z4V5 671 aaPredicted RBP7.37□□□□□ -1.23
CBX5-201ENST00000209875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.37□□□□□ -1.232e-12■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms