RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
CDC6-201ENST00000209728 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
CDC6-201ENST00000209728 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
CDC6-201ENST00000209728 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
CDC6-201ENST00000209728 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
CDC6-201ENST00000209728 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
CDC6-201ENST00000209728 TSPY4P0CV99 314 aa17.02■□□□□ 0.31
CDC6-201ENST00000209728 TSPY10P0CW01 314 aa17.02■□□□□ 0.31
CDC6-201ENST00000209728 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
CDC6-201ENST00000209728 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
CDC6-201ENST00000209728 KANK4Q5T7N3 995 aaPredicted RBP17■□□□□ 0.31
CDC6-201ENST00000209728 NEFMP07197 916 aa16.97■□□□□ 0.31
CDC6-201ENST00000209728 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
CDC6-201ENST00000209728 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
CDC6-201ENST00000209728 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
CDC6-201ENST00000209728 WDR43Q15061 677 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDC6-201ENST00000209728 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
CDC6-201ENST00000209728 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
CDC6-201ENST00000209728 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
CDC6-201ENST00000209728 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
CDC6-201ENST00000209728 B4GALNT3Q6L9W6 998 aa16.85■□□□□ 0.29
CDC6-201ENST00000209728 WIZO95785 1651 aa16.84■□□□□ 0.29
CDC6-201ENST00000209728 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
CDC6-201ENST00000209728 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
CDC6-201ENST00000209728 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
CDC6-201ENST00000209728 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.28
CDC6-201ENST00000209728 ARXQ96QS3 562 aa16.83■□□□□ 0.28
CDC6-201ENST00000209728 CARD11Q9BXL7 1154 aa16.82■□□□□ 0.28
CDC6-201ENST00000209728 CUX2O14529 1486 aa16.82■□□□□ 0.28
CDC6-201ENST00000209728 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
CDC6-201ENST00000209728 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
CDC6-201ENST00000209728 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
CDC6-201ENST00000209728 PLEKHD1A6NEE1 506 aa16.8■□□□□ 0.28
CDC6-201ENST00000209728 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
CDC6-201ENST00000209728 CCER2I3L3R5 266 aa16.78■□□□□ 0.28
CDC6-201ENST00000209728 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
CDC6-201ENST00000209728 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
CDC6-201ENST00000209728 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
CDC6-201ENST00000209728 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
CDC6-201ENST00000209728 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
CDC6-201ENST00000209728 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
CDC6-201ENST00000209728 FOXD1Q16676 465 aa16.73■□□□□ 0.27
CDC6-201ENST00000209728 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
CDC6-201ENST00000209728 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
CDC6-201ENST00000209728 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
CDC6-201ENST00000209728 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
CDC6-201ENST00000209728 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
CDC6-201ENST00000209728 ANP32BQ92688 251 aaKnown RBP16.68■□□□□ 0.26
CDC6-201ENST00000209728 KNSTRNQ9Y448 316 aa16.68■□□□□ 0.26
CDC6-201ENST00000209728 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
CDC6-201ENST00000209728 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
CDC6-201ENST00000209728 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
CDC6-201ENST00000209728 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
CDC6-201ENST00000209728 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
CDC6-201ENST00000209728 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
CDC6-201ENST00000209728 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
CDC6-201ENST00000209728 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
CDC6-201ENST00000209728 RGS3P49796 1198 aa16.62■□□□□ 0.25
CDC6-201ENST00000209728 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
CDC6-201ENST00000209728 EIF4G1Q04637 1599 aaKnown RBP16.59■□□□□ 0.25
CDC6-201ENST00000209728 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
CDC6-201ENST00000209728 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
CDC6-201ENST00000209728 BECN1Q14457 450 aa16.57■□□□□ 0.24
CDC6-201ENST00000209728 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
CDC6-201ENST00000209728 CDCA8Q53HL2 280 aa16.57■□□□□ 0.24
CDC6-201ENST00000209728 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
CDC6-201ENST00000209728 PKD2Q13563 968 aa16.56■□□□□ 0.24
CDC6-201ENST00000209728 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
CDC6-201ENST00000209728 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
CDC6-201ENST00000209728 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
CDC6-201ENST00000209728 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
CDC6-201ENST00000209728 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
CDC6-201ENST00000209728 FHOD3Q2V2M9 1422 aa16.52■□□□□ 0.24
CDC6-201ENST00000209728 DEKP35659 375 aaKnown RBP16.51■□□□□ 0.23
CDC6-201ENST00000209728 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
CDC6-201ENST00000209728 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
CDC6-201ENST00000209728 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
CDC6-201ENST00000209728 TMF1P82094 1093 aa16.48■□□□□ 0.23
CDC6-201ENST00000209728 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
CDC6-201ENST00000209728 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
CDC6-201ENST00000209728 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
CDC6-201ENST00000209728 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
CDC6-201ENST00000209728 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
CDC6-201ENST00000209728 NUP155O75694 1391 aa16.4■□□□□ 0.22
CDC6-201ENST00000209728 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
CDC6-201ENST00000209728 GLIPR1L2Q4G1C9 344 aa16.4■□□□□ 0.22
CDC6-201ENST00000209728 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
CDC6-201ENST00000209728 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
CDC6-201ENST00000209728 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
CDC6-201ENST00000209728 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
CDC6-201ENST00000209728 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
CDC6-201ENST00000209728 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
CDC6-201ENST00000209728 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
CDC6-201ENST00000209728 PLEKHG5O94827 1062 aa16.35■□□□□ 0.21
CDC6-201ENST00000209728 RALBP1Q15311 655 aa16.35■□□□□ 0.21
CDC6-201ENST00000209728 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
CDC6-201ENST00000209728 GOLGA6L22H0YM25 854 aa16.34■□□□□ 0.21
CDC6-201ENST00000209728 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
CDC6-201ENST00000209728 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
CDC6-201ENST00000209728 POGKQ9P215 609 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms