RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ISY1Q9ULR0 285 aaKnown RBP4.57□□□□□ -1.68
NEB-201ENST00000172853 ANP32AP39687 249 aaKnown RBP4.56□□□□□ -1.68
NEB-201ENST00000172853 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.56□□□□□ -1.68
NEB-201ENST00000172853 G3V3G9 751 aa4.56□□□□□ -1.68
NEB-201ENST00000172853 DCAF8Q5TAQ9 597 aa4.56□□□□□ -1.68
NEB-201ENST00000172853 CNKSR2Q8WXI2 1034 aa4.56□□□□□ -1.68
NEB-201ENST00000172853 GOLGA6L6A8MZA4 724 aa4.55□□□□□ -1.68
NEB-201ENST00000172853 TRIM26Q12899 539 aaPredicted RBP4.55□□□□□ -1.68
NEB-201ENST00000172853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.55□□□□□ -1.68
NEB-201ENST00000172853 KIAA2012Q0VF49 1180 aa4.55□□□□□ -1.68
NEB-201ENST00000172853 ACIN1Q9UKV3 1341 aaKnown RBP4.55□□□□□ -1.68
NEB-201ENST00000172853 ANO8Q9HCE9 1232 aaPredicted RBP4.54□□□□□ -1.68
NEB-201ENST00000172853 ERCC6Q03468 1493 aa4.54□□□□□ -1.68
NEB-201ENST00000172853 NRDCO43847 1150 aa4.54□□□□□ -1.68
NEB-201ENST00000172853 CSRNP3Q8WYN3 585 aa4.54□□□□□ -1.68
NEB-201ENST00000172853 LMOD2Q6P5Q4 547 aa4.53□□□□□ -1.68
NEB-201ENST00000172853 CASC1Q6TDU7 716 aa4.53□□□□□ -1.68
NEB-201ENST00000172853 CHAF1AQ13111 956 aaPredicted RBP4.53□□□□□ -1.69
NEB-201ENST00000172853 WDR43Q15061 677 aaKnown RBP eCLIP4.52□□□□□ -1.69
NEB-201ENST00000172853 CWC22Q9HCG8 908 aaKnown RBP4.52□□□□□ -1.69
NEB-201ENST00000172853 PNNQ9H307 717 aaKnown RBP4.52□□□□□ -1.69
NEB-201ENST00000172853 HDGFP51858 240 aaKnown RBP4.52□□□□□ -1.69
NEB-201ENST00000172853 TNNT2P45379 298 aaPredicted RBP4.51□□□□□ -1.69
NEB-201ENST00000172853 GOLGA6L22H0YM25 854 aa4.51□□□□□ -1.69
NEB-201ENST00000172853 SENP3Q9H4L4 574 aaPredicted RBP4.51□□□□□ -1.69
NEB-201ENST00000172853 CCDC9Q9Y3X0 531 aaKnown RBP4.5□□□□□ -1.69
NEB-201ENST00000172853 PABPN1Q86U42 306 aaKnown RBP eCLIP4.5□□□□□ -1.69
NEB-201ENST00000172853 CHMP7Q8WUX9 453 aaPredicted RBP4.5□□□□□ -1.69
NEB-201ENST00000172853 UNC13AQ9UPW8 1703 aa4.5□□□□□ -1.69
NEB-201ENST00000172853 FGD1P98174 961 aa4.49□□□□□ -1.69
NEB-201ENST00000172853 NOC3LQ8WTT2 800 aaKnown RBP4.49□□□□□ -1.69
NEB-201ENST00000172853 CEP89Q96ST8 783 aa4.49□□□□□ -1.69
NEB-201ENST00000172853 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
NEB-201ENST00000172853 MEX3CQ5U5Q3 659 aaKnown RBP4.48□□□□□ -1.69
NEB-201ENST00000172853 CHMP4BQ9H444 224 aaKnown RBP4.48□□□□□ -1.69
NEB-201ENST00000172853 PPP4R2Q9NY27 417 aa4.48□□□□□ -1.69
NEB-201ENST00000172853 OS9Q13438 667 aaPredicted RBP4.48□□□□□ -1.69
NEB-201ENST00000172853 TSPY4P0CV99 314 aa4.48□□□□□ -1.69
NEB-201ENST00000172853 TSPY10P0CW01 314 aa4.48□□□□□ -1.69
NEB-201ENST00000172853 CFAP53Q96M91 514 aa4.47□□□□□ -1.69
NEB-201ENST00000172853 TAOK2Q9UL54 1235 aa4.47□□□□□ -1.69
NEB-201ENST00000172853 NAP1L2Q9ULW6 460 aaPredicted RBP4.47□□□□□ -1.69
NEB-201ENST00000172853 PTMAP06454 111 aaKnown RBP4.46□□□□□ -1.69
NEB-201ENST00000172853 ARID3CA6NKF2 412 aa4.46□□□□□ -1.69
NEB-201ENST00000172853 USP35Q9P2H5 1018 aa4.46□□□□□ -1.69
NEB-201ENST00000172853 NBR1Q14596 966 aa4.46□□□□□ -1.7
NEB-201ENST00000172853 MAP3K9P80192 1104 aa4.46□□□□□ -1.7
NEB-201ENST00000172853 KCNJ4P48050 445 aa4.45□□□□□ -1.7
NEB-201ENST00000172853 BECN1Q14457 450 aa4.45□□□□□ -1.7
NEB-201ENST00000172853 DNTTIP2Q5QJE6 756 aaKnown RBP4.45□□□□□ -1.7
NEB-201ENST00000172853 GNL2Q13823 731 aaKnown RBP4.45□□□□□ -1.7
NEB-201ENST00000172853 CCDC34Q96HJ3 373 aa4.45□□□□□ -1.7
NEB-201ENST00000172853 AMER1Q5JTC6 1135 aaPredicted RBP4.44□□□□□ -1.7
NEB-201ENST00000172853 A0A0U1RQG5 324 aaPredicted RBP4.44□□□□□ -1.7
NEB-201ENST00000172853 TRIM34Q9BYJ4 488 aa4.44□□□□□ -1.7
NEB-201ENST00000172853 WWC2Q6AWC2 1192 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 TCEAL9Q9UHQ7 104 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
NEB-201ENST00000172853 CDCA8Q53HL2 280 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 NUDCQ9Y266 331 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 TMC1Q8TDI8 760 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 MSH5O43196 834 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 MARCH6O60337 910 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 GOLGA6L4A6NEF3 574 aa4.43□□□□□ -1.7
NEB-201ENST00000172853 CHMP4AQ9BY43 222 aa4.42□□□□□ -1.7
NEB-201ENST00000172853 NEUROD2Q15784 382 aa4.42□□□□□ -1.7
NEB-201ENST00000172853 VPS53Q5VIR6 699 aa4.42□□□□□ -1.7
NEB-201ENST00000172853 P3H3Q8IVL6 736 aa4.42□□□□□ -1.7
NEB-201ENST00000172853 SF3B2Q13435 895 aaKnown RBP4.42□□□□□ -1.7
NEB-201ENST00000172853 POGKQ9P215 609 aa4.42□□□□□ -1.7
NEB-201ENST00000172853 MAPK8IP3Q9UPT6 1336 aa4.42□□□□□ -1.7
NEB-201ENST00000172853 GTF2E1P29083 439 aaPredicted RBP4.42□□□□□ -1.7
NEB-201ENST00000172853 CSB-PGBD3P0DP91 1061 aa4.41□□□□□ -1.7
NEB-201ENST00000172853 KLHL34Q8N239 644 aa4.41□□□□□ -1.7
NEB-201ENST00000172853 PPM1GO15355 546 aaPredicted RBP4.41□□□□□ -1.7
NEB-201ENST00000172853 MCCP23508 829 aa4.41□□□□□ -1.7
NEB-201ENST00000172853 SALL2Q9Y467 1007 aaPredicted RBP4.41□□□□□ -1.7
NEB-201ENST00000172853 TAF7LQ5H9L4 462 aa4.4□□□□□ -1.7
NEB-201ENST00000172853 CFAP44Q96MT7 982 aa4.4□□□□□ -1.7
NEB-201ENST00000172853 PAF1Q8N7H5 531 aa4.4□□□□□ -1.7
NEB-201ENST00000172853 NOL10Q9BSC4 688 aaKnown RBP4.4□□□□□ -1.7
NEB-201ENST00000172853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.4□□□□□ -1.7
NEB-201ENST00000172853 TPM4P67936 248 aa4.4□□□□□ -1.7
NEB-201ENST00000172853 WASHC2AQ641Q2 1341 aa4.4□□□□□ -1.7
NEB-201ENST00000172853 MS4A1P11836 297 aa4.4□□□□□ -1.71
NEB-201ENST00000172853 FRAT2O75474 233 aaPredicted RBP4.4□□□□□ -1.71
NEB-201ENST00000172853 PDE4CQ08493 712 aa4.4□□□□□ -1.71
NEB-201ENST00000172853 SRPK2P78362 688 aaKnown RBP4.4□□□□□ -1.71
NEB-201ENST00000172853 FBXO3Q9UK99 471 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 R3HCC1Q9Y3T6 440 aaKnown RBP4.39□□□□□ -1.71
NEB-201ENST00000172853 AMOTL1Q8IY63 956 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 CCAR1Q8IX12 1150 aaKnown RBP4.39□□□□□ -1.71
NEB-201ENST00000172853 PLCB2Q00722 1185 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 ERICH6BQ5W0A0 696 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 DDRGK1Q96HY6 314 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 ZNF710Q8N1W2 664 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 LAS1LQ9Y4W2 734 aaKnown RBP4.39□□□□□ -1.71
NEB-201ENST00000172853 HDAC5Q9UQL6 1122 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 TPRNQ4KMQ1 711 aa4.39□□□□□ -1.71
NEB-201ENST00000172853 GORABQ5T7V8 394 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms