RNA–Protein interactions for RNA: ENSMUST00000209578.1

Ebf3-205, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-205ENSMUST00000209578 SynmQ70IV5 1561 aa15.72■□□□□ 0.11
Ebf3-205ENSMUST00000209578 Clip1Q922J3 1391 aa15.72■□□□□ 0.11
Ebf3-205ENSMUST00000209578 AqrQ8CFQ3 1481 aaKnown RBP15.68■□□□□ 0.1
Ebf3-205ENSMUST00000209578 Fgd6Q69ZL1 1399 aa15.67■□□□□ 0.1
Ebf3-205ENSMUST00000209578 Carmil1Q6EDY6 1374 aa15.67■□□□□ 0.1
Ebf3-205ENSMUST00000209578 Grin2aP35436 1464 aa15.66■□□□□ 0.1
Ebf3-205ENSMUST00000209578 Magi3Q9EQJ9 1476 aa15.64■□□□□ 0.09
Ebf3-205ENSMUST00000209578 Setd1bQ8CFT2 1985 aa15.62■□□□□ 0.09
Ebf3-205ENSMUST00000209578 Pla2r1Q62028 1487 aa15.61■□□□□ 0.09
Ebf3-205ENSMUST00000209578 Adgrl3Q80TS3 1537 aa15.61■□□□□ 0.09
Ebf3-205ENSMUST00000209578 Gpatch8A2A6A1 1505 aa15.61■□□□□ 0.09
Ebf3-205ENSMUST00000209578 Eea1Q8BL66 1411 aa15.59■□□□□ 0.09
Ebf3-205ENSMUST00000209578 Setd5Q5XJV7 1441 aa15.58■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Gapvd1Q6PAR5 1458 aa15.56■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Cux1P53564 1515 aa15.55■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Ap3b1Q9Z1T1 1105 aa15.55■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Cep170Q6A065 1588 aa15.55■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Arhgef5E9Q7D5 1581 aa15.55■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Ankrd26Q811D2 1581 aa15.55■□□□□ 0.08
Ebf3-205ENSMUST00000209578 EprsQ8CGC7 1512 aaKnown RBP15.54■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Gm156Q58A37 223 aa15.52■□□□□ 0.08
Ebf3-205ENSMUST00000209578 Arap1Q4LDD4 1452 aa15.52■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Polr1aO35134 1717 aaKnown RBP15.52■□□□□ 0.07
Ebf3-205ENSMUST00000209578 CadpsQ80TJ1 1355 aa15.51■□□□□ 0.07
Ebf3-205ENSMUST00000209578 AknaQ80VW7 1404 aa15.49■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Fyco1Q8VDC1 1437 aa15.49■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Abcc1O35379 1528 aa15.49■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Rpap1Q80TE0 1409 aa15.48■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Erich3F6QRE9 1637 aa15.48■□□□□ 0.07
Ebf3-205ENSMUST00000209578 PtprtQ99M80 1454 aa15.48■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Plekhg3Q4VAC9 1341 aa15.47■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Ttbk1Q6PCN3 1308 aa15.47■□□□□ 0.07
Ebf3-205ENSMUST00000209578 Rpgrip1Q9EPQ2 1331 aa15.46■□□□□ 0.06
Ebf3-205ENSMUST00000209578 WizO88286 1684 aaKnown RBP15.45■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Ythdc2B2RR83 1445 aaKnown RBP15.44■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Gm7298A0A0N4SVU1 1476 aa15.44■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Adamts12Q811B3 1600 aa15.44■□□□□ 0.06
Ebf3-205ENSMUST00000209578 TchhA0A0B4J1F9 1599 aa15.42■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Pcf11G3X9Z4 1553 aa15.42■□□□□ 0.06
Ebf3-205ENSMUST00000209578 PxdnQ3UQ28 1475 aa15.42■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Acin1Q9JIX8 1338 aaKnown RBP15.42■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Pcdh10E9PXQ7 1057 aa15.42■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Lmo7E9PYF4 1699 aaKnown RBP15.4■□□□□ 0.06
Ebf3-205ENSMUST00000209578 UbtfP25976 765 aaKnown RBP15.4■□□□□ 0.06
Ebf3-205ENSMUST00000209578 Abca16E9PWJ7 1678 aa15.39■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Aebp1Q640N1 1128 aa15.39■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Dnmt1P13864 1620 aaKnown RBP15.39■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Soga1E1U8D0 1418 aa15.39■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Abca5Q8K448 1642 aa15.38■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Arhgap27A2AB59 869 aa15.38■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Map3k4O08648 1597 aa15.36■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Tiam1Q60610 1591 aa15.35■□□□□ 0.05
Ebf3-205ENSMUST00000209578 CntlnA2AM05 1397 aa15.35■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Pprc1Q6NZN1 1644 aa15.34■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Abcc2Q8VI47 1543 aa15.34■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Gm14025A2AP89 1413 aa15.34■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Neo1P97798 1493 aa15.34■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Chd1P40201 1711 aa15.34■□□□□ 0.05
Ebf3-205ENSMUST00000209578 Naip1Q9QWK5 1403 aa15.34■□□□□ 0.05
Ebf3-205ENSMUST00000209578 BlmO88700 1416 aa15.33■□□□□ 0.04
Ebf3-205ENSMUST00000209578 Slx4Q6P1D7 1565 aa15.31■□□□□ 0.04
Ebf3-205ENSMUST00000209578 Setbp1Q9Z180 1582 aa15.31■□□□□ 0.04
Ebf3-205ENSMUST00000209578 Lmod2Q3UHZ5 550 aa15.31■□□□□ 0.04
Ebf3-205ENSMUST00000209578 WrnO09053 1401 aa15.29■□□□□ 0.04
Ebf3-205ENSMUST00000209578 BC005561E9Q5E2 1589 aa15.28■□□□□ 0.04
Ebf3-205ENSMUST00000209578 AI481877A2ALV5 1481 aa15.28■□□□□ 0.04
Ebf3-205ENSMUST00000209578 Kif27Q7M6Z4 1394 aa15.26■□□□□ 0.03
Ebf3-205ENSMUST00000209578 Arhgef12Q8R4H2 1543 aaKnown RBP15.25■□□□□ 0.03
Ebf3-205ENSMUST00000209578 Peg3Q3URU2 1571 aa15.24■□□□□ 0.03
Ebf3-205ENSMUST00000209578 Mier1Q5UAK0 511 aa15.22■□□□□ 0.03
Ebf3-205ENSMUST00000209578 Gm1043A0A140LJC2 1431 aa15.21■□□□□ 0.03
Ebf3-205ENSMUST00000209578 Jph4Q80WT0 628 aa15.2■□□□□ 0.02
Ebf3-205ENSMUST00000209578 Ppp1r18Q8BQ30 594 aa15.2■□□□□ 0.02
Ebf3-205ENSMUST00000209578 Ak9G3UYQ4 1894 aa15.13■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Igf1rQ60751 1373 aa15.13■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Arhgap31A6X8Z5 1425 aa15.13■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Rapgef6Q5NCJ1 1609 aa15.13■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Clasp1Q80TV8 1535 aaKnown RBP15.13■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Fkbp15Q6P9Q6 1216 aaKnown RBP15.11■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Ncapd3Q6ZQK0 1506 aa15.11■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Ccdc141E9Q8Q6 1531 aa15.09■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Rrbp1Q99PL5 1605 aaKnown RBP15.08■□□□□ 0.01
Ebf3-205ENSMUST00000209578 Kdm5bQ80Y84 1544 aa15.08■□□□□ 0
Ebf3-205ENSMUST00000209578 Mug1P28665 1476 aa15.08■□□□□ 0
Ebf3-205ENSMUST00000209578 Ncoa3O09000 1398 aa15.08■□□□□ 0
Ebf3-205ENSMUST00000209578 NexmifQ5DTT1 1515 aa15.07■□□□□ 0
Ebf3-205ENSMUST00000209578 Ncoa2Q61026 1462 aa15.07■□□□□ 0
Ebf3-205ENSMUST00000209578 Ccnb3Q810T2 1396 aa15.07■□□□□ 0
Ebf3-205ENSMUST00000209578 Arhgef11Q68FM7 1552 aa15.06■□□□□ 0
Ebf3-205ENSMUST00000209578 Ifnlr1Q8CGK5 535 aa15.05■□□□□ -0
Ebf3-205ENSMUST00000209578 Lmtk2Q3TYD6 1471 aa15.05■□□□□ -0
Ebf3-205ENSMUST00000209578 Ttc37F8VPK0 1563 aa15.04■□□□□ -0
Ebf3-205ENSMUST00000209578 AdgbG3UZ78 1657 aa15.04■□□□□ -0
Ebf3-205ENSMUST00000209578 Lrrc9Q8CDN9 1456 aa15.03■□□□□ -0
Ebf3-205ENSMUST00000209578 3425401B19RikD3Z1D3 1412 aa15.03■□□□□ -0
Ebf3-205ENSMUST00000209578 Mapkbp1Q6NS57 1503 aa15.03■□□□□ -0
Ebf3-205ENSMUST00000209578 Magi1Q6RHR9 1471 aa15.02□□□□□ -0.01
Ebf3-205ENSMUST00000209578 Mroh2aD3Z750 1679 aa15.02□□□□□ -0.01
Ebf3-205ENSMUST00000209578 Fam50aQ9WV03 339 aaKnown RBP15□□□□□ -0.01
Ebf3-205ENSMUST00000209578 Wdr7Q920I9 1489 aa15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms