RNA–Protein interactions for RNA: ENSMUST00000198359.1

Trav13n-1-201, Transcript of T cell receptor alpha variable 13N-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13n-1, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1-201ENSMUST00000198359 Camsap1A2AHC3 1581 aa12.14□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 TnnQ80Z71 1560 aa12.14□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 PtprkP35822 1457 aa12.14□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 PtprtQ99M80 1454 aa12.14□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Duox2A2AQ99 1517 aa12.1□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Cc2d2bA0A286YDU8 1405 aa12.1□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Nup160Q9Z0W3 1402 aaKnown RBP12.1□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Cep170Q6A065 1588 aa12.09□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Setd1bQ8CFT2 1985 aa12.09□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Prm3Q62100 101 aa12.09□□□□□ -0.47
Trav13n-1-201ENSMUST00000198359 Golga3P55937 1487 aa12.08□□□□□ -0.48
Trav13n-1-201ENSMUST00000198359 Gapvd1Q6PAR5 1458 aa12.08□□□□□ -0.48
Trav13n-1-201ENSMUST00000198359 Prdm10Q3UTQ7 1184 aa12.06□□□□□ -0.48
Trav13n-1-201ENSMUST00000198359 Fgd6Q69ZL1 1399 aa12.04□□□□□ -0.48
Trav13n-1-201ENSMUST00000198359 Ecm2Q5FW85 670 aa12.02□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Znf219Q6IQX8 726 aa12.02□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Rsph4aQ8BYM7 716 aa12.02□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Pbrm1Q8BSQ9 1634 aaKnown RBP12□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Pprc1Q6NZN1 1644 aa12□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Samd9lQ69Z37 1561 aa11.96□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Grin2bQ01097 1482 aa11.96□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 Ythdc2B2RR83 1445 aaKnown RBP11.96□□□□□ -0.49
Trav13n-1-201ENSMUST00000198359 AqrQ8CFQ3 1481 aaKnown RBP11.95□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Abcc1O35379 1528 aa11.94□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Rapgef2Q8CHG7 1496 aa11.94□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Efcab5A0JP43 1406 aa11.94□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Rad54l2Q99NG0 1466 aa11.93□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Grin2aP35436 1464 aa11.91□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Magi3Q9EQJ9 1476 aa11.9□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 AknaQ80VW7 1404 aa11.9□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 CadpsQ80TJ1 1355 aa11.9□□□□□ -0.5
Trav13n-1-201ENSMUST00000198359 Plekhg3Q4VAC9 1341 aa11.89□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Fmn1Q05860 1466 aa11.89□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Setbp1Q9Z180 1582 aa11.88□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Cngb1E1AZ71 1325 aa11.87□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Rimbp2Q80U40 1072 aa11.86□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Npm2Q80W85 207 aa11.86□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Ppp1r18Q8BQ30 594 aa11.85□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Chd1P40201 1711 aa11.85□□□□□ -0.51
Trav13n-1-201ENSMUST00000198359 Soga1E1U8D0 1418 aa11.82□□□□□ -0.52
Trav13n-1-201ENSMUST00000198359 C1qtnf12Q8R2Z0 308 aa11.79□□□□□ -0.52
Trav13n-1-201ENSMUST00000198359 Gpatch8A2A6A1 1505 aa11.78□□□□□ -0.52
Trav13n-1-201ENSMUST00000198359 Top2aQ01320 1528 aaKnown RBP11.78□□□□□ -0.52
Trav13n-1-201ENSMUST00000198359 Styxl1Q9DAR2 321 aa11.78□□□□□ -0.52
Trav13n-1-201ENSMUST00000198359 Pla2r1Q62028 1487 aa11.77□□□□□ -0.52
Trav13n-1-201ENSMUST00000198359 Ak9G3UYQ4 1894 aa11.77□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Dnmt1P13864 1620 aaKnown RBP11.77□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 AI481877A2ALV5 1481 aa11.76□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Riok3Q9DBU3 519 aaKnown RBP11.76□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 EprsQ8CGC7 1512 aaKnown RBP11.76□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 MyclP10166 368 aa11.75□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Neo1P97798 1493 aa11.75□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Gm14025A2AP89 1413 aa11.74□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Arhgap27A2AB59 869 aa11.73□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Ccdc88bQ4QRL3 1481 aa11.73□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 NrkQ9R0G8 1455 aa11.72□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Abcc2Q8VI47 1543 aa11.71□□□□□ -0.53
Trav13n-1-201ENSMUST00000198359 Clasp1Q80TV8 1535 aaKnown RBP11.7□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Alpk3Q924C5 1678 aa11.69□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 SynmQ70IV5 1561 aa11.69□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 BC005561E9Q5E2 1589 aa11.68□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Map3k4O08648 1597 aa11.67□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Arhgef12Q8R4H2 1543 aaKnown RBP11.67□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Ifnlr1Q8CGK5 535 aa11.67□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 AdgbG3UZ78 1657 aa11.66□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Ttc37F8VPK0 1563 aa11.66□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 PxdnQ3UQ28 1475 aa11.65□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Bach1P97302 739 aa11.65□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Arhgef11Q68FM7 1552 aa11.65□□□□□ -0.54
Trav13n-1-201ENSMUST00000198359 Mapkbp1Q6NS57 1503 aa11.65□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Abca16E9PWJ7 1678 aa11.64□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Jph4Q80WT0 628 aa11.63□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Prdm16A2A935 1275 aa11.62□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Shroom4Q1W617 1475 aa11.62□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Slx4Q6P1D7 1565 aa11.62□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 WizO88286 1684 aaKnown RBP11.61□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 TchhA0A0B4J1F9 1599 aa11.6□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Taok2Q6ZQ29 1240 aa11.6□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Adamts12Q811B3 1600 aa11.6□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Arid3cA6PWV5 409 aa11.59□□□□□ -0.55
Trav13n-1-201ENSMUST00000198359 Dnajc5gQ8C632 165 aa11.58□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Depdc5P61460 1591 aa11.58□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Igf1rQ60751 1373 aa11.57□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Zfyve16Q80U44 1528 aa11.57□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Cyb5rlB1AS42 316 aa11.57□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 CatipB9EKE5 520 aa11.57□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Eif4g1Q6NZJ6 1600 aaKnown RBP11.56□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Fndc1E9Q043 1732 aa11.55□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Zeb1Q64318 1117 aa11.55□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Arid3aQ62431 601 aa11.54□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Lrrc9Q8CDN9 1456 aa11.54□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Fkbp15Q6P9Q6 1216 aaKnown RBP11.53□□□□□ -0.56
Trav13n-1-201ENSMUST00000198359 Fam163aQ8CAA5 168 aa11.52□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 MlecQ6ZQI3 291 aaKnown RBP11.5□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 WdpcpQ8C456 722 aa11.49□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 Rpap1Q80TE0 1409 aa11.49□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 Znf608Q56A10 1511 aa11.49□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 Kdm5bQ80Y84 1544 aa11.48□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 Mroh2bQ7M6Y6 1581 aa11.48□□□□□ -0.57
Trav13n-1-201ENSMUST00000198359 Brwd3A2AHJ4 1799 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms