RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Arap1Q4LDD4 1452 aa38.66■■■■□ 3.78
Smarcc1-203ENSMUST00000197480 Cux1P53564 1515 aa38.64■■■■□ 3.78
Smarcc1-203ENSMUST00000197480 Grin2aP35436 1464 aa38.64■■■■□ 3.78
Smarcc1-203ENSMUST00000197480 Setd1bQ8CFT2 1985 aa38.6■■■■□ 3.77
Smarcc1-203ENSMUST00000197480 Pbrm1Q8BSQ9 1634 aaKnown RBP38.58■■■■□ 3.77
Smarcc1-203ENSMUST00000197480 Polr1aO35134 1717 aaKnown RBP38.58■■■■□ 3.77
Smarcc1-203ENSMUST00000197480 Arhgef5E9Q7D5 1581 aa38.53■■■■□ 3.76
Smarcc1-203ENSMUST00000197480 Gpatch8A2A6A1 1505 aa38.51■■■■□ 3.76
Smarcc1-203ENSMUST00000197480 Nup160Q9Z0W3 1402 aaKnown RBP38.5■■■■□ 3.75
Smarcc1-203ENSMUST00000197480 EprsQ8CGC7 1512 aaKnown RBP38.49■■■■□ 3.75
Smarcc1-203ENSMUST00000197480 Rpgrip1Q9EPQ2 1331 aa38.46■■■■□ 3.75
Smarcc1-203ENSMUST00000197480 Fyco1Q8VDC1 1437 aa38.45■■■■□ 3.75
Smarcc1-203ENSMUST00000197480 Lmo7E9PYF4 1699 aaKnown RBP38.44■■■■□ 3.74
Smarcc1-203ENSMUST00000197480 Pcf11G3X9Z4 1553 aa38.42■■■■□ 3.74
Smarcc1-203ENSMUST00000197480 Rpap1Q80TE0 1409 aa38.42■■■■□ 3.74
Smarcc1-203ENSMUST00000197480 Ap3b1Q9Z1T1 1105 aa38.4■■■■□ 3.74
Smarcc1-203ENSMUST00000197480 Plekhg3Q4VAC9 1341 aa38.36■■■■□ 3.73
Smarcc1-203ENSMUST00000197480 Eif4g3Q80XI3 1579 aaKnown RBP38.34■■■■□ 3.73
Smarcc1-203ENSMUST00000197480 Adamts12Q811B3 1600 aa38.34■■■■□ 3.73
Smarcc1-203ENSMUST00000197480 WizO88286 1684 aaKnown RBP38.32■■■■□ 3.72
Smarcc1-203ENSMUST00000197480 Tiam1Q60610 1591 aa38.31■■■■□ 3.72
Smarcc1-203ENSMUST00000197480 Cc2d2bA0A286YDU8 1405 aa38.27■■■■□ 3.72
Smarcc1-203ENSMUST00000197480 Abca5Q8K448 1642 aa38.27■■■■□ 3.72
Smarcc1-203ENSMUST00000197480 CadpsQ80TJ1 1355 aa38.26■■■■□ 3.72
Smarcc1-203ENSMUST00000197480 Rusc2Q80U22 1514 aa38.24■■■■□ 3.71
Smarcc1-203ENSMUST00000197480 UbtfP25976 765 aaKnown RBP38.24■■■■□ 3.71
Smarcc1-203ENSMUST00000197480 Gm7298A0A0N4SVU1 1476 aa38.22■■■■□ 3.71
Smarcc1-203ENSMUST00000197480 TchhA0A0B4J1F9 1599 aa38.21■■■■□ 3.71
Smarcc1-203ENSMUST00000197480 Abca16E9PWJ7 1678 aa38.21■■■■□ 3.71
Smarcc1-203ENSMUST00000197480 Naip1Q9QWK5 1403 aa38.19■■■■□ 3.7
Smarcc1-203ENSMUST00000197480 Slx4Q6P1D7 1565 aa38.17■■■■□ 3.7
Smarcc1-203ENSMUST00000197480 PxdnQ3UQ28 1475 aa38.15■■■■□ 3.7
Smarcc1-203ENSMUST00000197480 CntlnA2AM05 1397 aa38.13■■■■□ 3.69
Smarcc1-203ENSMUST00000197480 BlmO88700 1416 aa38.09■■■■□ 3.69
Smarcc1-203ENSMUST00000197480 Aebp1Q640N1 1128 aa38.09■■■■□ 3.69
Smarcc1-203ENSMUST00000197480 Peg3Q3URU2 1571 aa38.09■■■■□ 3.69
Smarcc1-203ENSMUST00000197480 Soga1E1U8D0 1418 aa38.09■■■■□ 3.69
Smarcc1-203ENSMUST00000197480 Mier1Q5UAK0 511 aa38.03■■■■□ 3.68
Smarcc1-203ENSMUST00000197480 Abcc2Q8VI47 1543 aa37.99■■■■□ 3.67
Smarcc1-203ENSMUST00000197480 Gm1043A0A140LJC2 1431 aa37.85■■■■□ 3.65
Smarcc1-203ENSMUST00000197480 Arhgap27A2AB59 869 aa37.84■■■■□ 3.65
Smarcc1-203ENSMUST00000197480 Lmod2Q3UHZ5 550 aa37.81■■■■□ 3.64
Smarcc1-203ENSMUST00000197480 Ncapd3Q6ZQK0 1506 aa37.81■■■■□ 3.64
Smarcc1-203ENSMUST00000197480 Shroom2A2ALU4 1481 aa37.79■■■■□ 3.64
Smarcc1-203ENSMUST00000197480 WrnO09053 1401 aa37.79■■■■□ 3.64
Smarcc1-203ENSMUST00000197480 Kif27Q7M6Z4 1394 aa37.77■■■■□ 3.64
Smarcc1-203ENSMUST00000197480 Map3k4O08648 1597 aa37.75■■■■□ 3.63
Smarcc1-203ENSMUST00000197480 Dnmt1P13864 1620 aaKnown RBP37.71■■■■□ 3.63
Smarcc1-203ENSMUST00000197480 BC005561E9Q5E2 1589 aa37.66■■■■□ 3.62
Smarcc1-203ENSMUST00000197480 Fgd6Q69ZL1 1399 aa37.6■■■■□ 3.61
Smarcc1-203ENSMUST00000197480 Rapgef6Q5NCJ1 1609 aa37.6■■■■□ 3.61
Smarcc1-203ENSMUST00000197480 Neo1P97798 1493 aa37.52■■■■□ 3.6
Smarcc1-203ENSMUST00000197480 Lmtk2Q3TYD6 1471 aa37.51■■■■□ 3.59
Smarcc1-203ENSMUST00000197480 Zcchc11B2RX14 1644 aaKnown RBP37.51■■■■□ 3.59
Smarcc1-203ENSMUST00000197480 AknaQ80VW7 1404 aa37.47■■■■□ 3.59
Smarcc1-203ENSMUST00000197480 3425401B19RikD3Z1D3 1412 aa37.47■■■■□ 3.59
Smarcc1-203ENSMUST00000197480 NexmifQ5DTT1 1515 aa37.45■■■■□ 3.59
Smarcc1-203ENSMUST00000197480 NefmP08553 848 aa37.45■■■■□ 3.59
Smarcc1-203ENSMUST00000197480 Arhgap31A6X8Z5 1425 aa37.42■■■■□ 3.58
Smarcc1-203ENSMUST00000197480 Arhgef11Q68FM7 1552 aa37.41■■■■□ 3.58
Smarcc1-203ENSMUST00000197480 Mug1P28665 1476 aa37.4■■■■□ 3.58
Smarcc1-203ENSMUST00000197480 Gcc2Q8CHG3 1679 aa37.39■■■■□ 3.58
Smarcc1-203ENSMUST00000197480 Ccnb3Q810T2 1396 aa37.39■■■■□ 3.58
Smarcc1-203ENSMUST00000197480 Arhgef12Q8R4H2 1543 aaKnown RBP37.38■■■■□ 3.58
Smarcc1-203ENSMUST00000197480 Ncoa3O09000 1398 aa37.37■■■■□ 3.57
Smarcc1-203ENSMUST00000197480 Ccdc141E9Q8Q6 1531 aa37.36■■■■□ 3.57
Smarcc1-203ENSMUST00000197480 Rrbp1Q99PL5 1605 aaKnown RBP37.33■■■■□ 3.57
Smarcc1-203ENSMUST00000197480 Ncoa2Q61026 1462 aa37.32■■■■□ 3.57
Smarcc1-203ENSMUST00000197480 Jph4Q80WT0 628 aa37.32■■■■□ 3.56
Smarcc1-203ENSMUST00000197480 Mroh2aD3Z750 1679 aa37.29■■■■□ 3.56
Smarcc1-203ENSMUST00000197480 Kdm5bQ80Y84 1544 aa37.29■■■■□ 3.56
Smarcc1-203ENSMUST00000197480 Cdc42bpaQ3UU96 1719 aa37.28■■■■□ 3.56
Smarcc1-203ENSMUST00000197480 Abcc1O35379 1528 aa37.23■■■■□ 3.55
Smarcc1-203ENSMUST00000197480 Kiaa1551Q5DTW7 1521 aa37.23■■■■□ 3.55
Smarcc1-203ENSMUST00000197480 Magi1Q6RHR9 1471 aa37.21■■■■□ 3.55
Smarcc1-203ENSMUST00000197480 Chd1P40201 1711 aa37.21■■■■□ 3.55
Smarcc1-203ENSMUST00000197480 Gm14025A2AP89 1413 aa37.21■■■■□ 3.55
Smarcc1-203ENSMUST00000197480 A2mQ6GQT1 1474 aa37.17■■■■□ 3.54
Smarcc1-203ENSMUST00000197480 Dhx57Q6P5D3 1388 aaKnown RBP37.14■■■■□ 3.54
Smarcc1-203ENSMUST00000197480 Fam50aQ9WV03 339 aaKnown RBP37.13■■■■□ 3.53
Smarcc1-203ENSMUST00000197480 Naip2Q9QUK4 1447 aa37.1■■■■□ 3.53
Smarcc1-203ENSMUST00000197480 Prex2Q3LAC4 1598 aa37.1■■■■□ 3.53
Smarcc1-203ENSMUST00000197480 Mapkbp1Q6NS57 1503 aa37.09■■■■□ 3.53
Smarcc1-203ENSMUST00000197480 Fam163aQ8CAA5 168 aa37.08■■■■□ 3.53
Smarcc1-203ENSMUST00000197480 Fkbp15Q6P9Q6 1216 aaKnown RBP37.04■■■■□ 3.52
Smarcc1-203ENSMUST00000197480 Mia2Q91ZV0 1396 aa37.02■■■■□ 3.52
Smarcc1-203ENSMUST00000197480 Fhad1A6PWD2 1420 aa37.01■■■■□ 3.52
Smarcc1-203ENSMUST00000197480 Arhgef40Q3UPH7 1517 aa37.01■■■■□ 3.51
Smarcc1-203ENSMUST00000197480 Adcy10Q8C0T9 1614 aa37.01■■■■□ 3.51
Smarcc1-203ENSMUST00000197480 Fancd2Q80V62 1450 aa37■■■■□ 3.51
Smarcc1-203ENSMUST00000197480 Cul7Q8VE73 1689 aa36.98■■■■□ 3.51
Smarcc1-203ENSMUST00000197480 Vps8Q0P5W1 1427 aa36.94■■■■□ 3.5
Smarcc1-203ENSMUST00000197480 Kdm6bQ5NCY0 1641 aa36.91■■■■□ 3.5
Smarcc1-203ENSMUST00000197480 NhsB1AV60 1647 aa36.87■■■■□ 3.49
Smarcc1-203ENSMUST00000197480 UacaQ8CGB3 1411 aa36.87■■■■□ 3.49
Smarcc1-203ENSMUST00000197480 Fam208aQ69ZR9 1610 aaKnown RBP36.86■■■■□ 3.49
Smarcc1-203ENSMUST00000197480 Abcc5Q9R1X5 1436 aa36.85■■■■□ 3.49
Smarcc1-203ENSMUST00000197480 Pelp1Q9DBD5 1123 aaKnown RBP36.85■■■■□ 3.49
Smarcc1-203ENSMUST00000197480 Chic2Q9D9G3 165 aa36.83■■■■□ 3.49
Smarcc1-203ENSMUST00000197480 Kiaa1210E9Q0C6 1637 aa36.82■■■■□ 3.48
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms