RNA–Protein interactions for RNA: ENSMUST00000189573.1

Gm28540-202, mousemouse

TSL 5 BASIC

Gene Gm28540, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28540-202ENSMUST00000189573 Lhx8O35652 367 aa12.36□□□□□ -0.43
Gm28540-202ENSMUST00000189573 Pde4dQ01063 747 aa12.36□□□□□ -0.43
Gm28540-202ENSMUST00000189573 MycnP03966 462 aaKnown RBP12.34□□□□□ -0.43
Gm28540-202ENSMUST00000189573 Repin1Q5U4E2 545 aa12.34□□□□□ -0.43
Gm28540-202ENSMUST00000189573 Atad2Q8CDM1 1040 aa12.31□□□□□ -0.44
Gm28540-202ENSMUST00000189573 Rnf225Q9D7D1 332 aa12.29□□□□□ -0.44
Gm28540-202ENSMUST00000189573 Hdac5Q9Z2V6 1113 aa12.29□□□□□ -0.44
Gm28540-202ENSMUST00000189573 Krtap4-1Q3UUY3 169 aa12.27□□□□□ -0.44
Gm28540-202ENSMUST00000189573 Pdap1Q3UHX2 181 aaKnown RBP12.27□□□□□ -0.45
Gm28540-202ENSMUST00000189573 Znf516Q7TSH3 1157 aa12.27□□□□□ -0.45
Gm28540-202ENSMUST00000189573 Gm45233A0A0N4SVE0 221 aa12.26□□□□□ -0.45
Gm28540-202ENSMUST00000189573 Fam117bQ3U3E2 584 aa12.26□□□□□ -0.45
Gm28540-202ENSMUST00000189573 Ube2uB1AUC4 352 aa12.22□□□□□ -0.45
Gm28540-202ENSMUST00000189573 Dcbld2Q91ZV3 769 aa12.22□□□□□ -0.45
Gm28540-202ENSMUST00000189573 ZxdbA2CE44 873 aa12.21□□□□□ -0.46
Gm28540-202ENSMUST00000189573 Gm13697A2AK42 830 aa12.15□□□□□ -0.46
Gm28540-202ENSMUST00000189573 Ndufv2Q9D6J6 248 aa12.15□□□□□ -0.46
Gm28540-202ENSMUST00000189573 Arhgef1Q61210 920 aaKnown RBP12.1□□□□□ -0.47
Gm28540-202ENSMUST00000189573 Znf579Q80VM4 562 aa12.1□□□□□ -0.47
Gm28540-202ENSMUST00000189573 Prim1P20664 417 aa12.06□□□□□ -0.48
Gm28540-202ENSMUST00000189573 Kank4Q6P9J5 1016 aa12.04□□□□□ -0.48
Gm28540-202ENSMUST00000189573 Tulp1Q9Z273 543 aa12.03□□□□□ -0.48
Gm28540-202ENSMUST00000189573 Bclaf1Q8K019 919 aaKnown RBP12.02□□□□□ -0.48
Gm28540-202ENSMUST00000189573 Chrm1P12657 460 aa11.99□□□□□ -0.49
Gm28540-202ENSMUST00000189573 ScribQ80U72 1612 aa11.96□□□□□ -0.49
Gm28540-202ENSMUST00000189573 St18Q80TY4 1045 aa11.95□□□□□ -0.5
Gm28540-202ENSMUST00000189573 Pak3Q61036 559 aa11.94□□□□□ -0.5
Gm28540-202ENSMUST00000189573 Jph4Q80WT0 628 aa11.94□□□□□ -0.5
Gm28540-202ENSMUST00000189573 C1qbpO35658 278 aa11.93□□□□□ -0.5
Gm28540-202ENSMUST00000189573 Fam181bQ80VF6 417 aa11.93□□□□□ -0.5
Gm28540-202ENSMUST00000189573 Spock2Q9ER58 423 aa11.9□□□□□ -0.5
Gm28540-202ENSMUST00000189573 Pcdhb17Q91VD8 799 aa11.86□□□□□ -0.51
Gm28540-202ENSMUST00000189573 Ecm2Q5FW85 670 aa11.79□□□□□ -0.52
Gm28540-202ENSMUST00000189573 Hmx1O70218 332 aa11.78□□□□□ -0.52
Gm28540-202ENSMUST00000189573 Ppp6r1Q7TSI3 856 aa11.77□□□□□ -0.52
Gm28540-202ENSMUST00000189573 Ferd3lQ923Z4 168 aa11.77□□□□□ -0.52
Gm28540-202ENSMUST00000189573 Pelp1Q9DBD5 1123 aaKnown RBP11.77□□□□□ -0.52
Gm28540-202ENSMUST00000189573 Rhox8Q6VSS7 320 aa11.76□□□□□ -0.53
Gm28540-202ENSMUST00000189573 Axin1O35625 863 aa11.75□□□□□ -0.53
Gm28540-202ENSMUST00000189573 Scarf1Q5ND28 820 aa11.73□□□□□ -0.53
Gm28540-202ENSMUST00000189573 EdaraddQ8VHX2 208 aa11.73□□□□□ -0.53
Gm28540-202ENSMUST00000189573 Dkk1O54908 272 aa11.72□□□□□ -0.53
Gm28540-202ENSMUST00000189573 Evi5P97366 809 aa11.72□□□□□ -0.53
Gm28540-202ENSMUST00000189573 Fndc3aQ8BX90 1198 aa11.72□□□□□ -0.53
Gm28540-202ENSMUST00000189573 E9Q0B3 247 aa11.7□□□□□ -0.54
Gm28540-202ENSMUST00000189573 Msh5Q9QUM7 833 aa11.67□□□□□ -0.54
Gm28540-202ENSMUST00000189573 Lce6aD3YV94 81 aa11.66□□□□□ -0.54
Gm28540-202ENSMUST00000189573 Actn4P57780 912 aaKnown RBP11.66□□□□□ -0.54
Gm28540-202ENSMUST00000189573 TimelessQ9R1X4 1197 aa11.65□□□□□ -0.54
Gm28540-202ENSMUST00000189573 Pcdh10E9PXQ7 1057 aa11.63□□□□□ -0.55
Gm28540-202ENSMUST00000189573 Scnn1bQ9WU38 638 aa11.63□□□□□ -0.55
Gm28540-202ENSMUST00000189573 NacadQ5SWP3 1504 aa11.62□□□□□ -0.55
Gm28540-202ENSMUST00000189573 Irx5Q9JKQ4 484 aa11.62□□□□□ -0.55
Gm28540-202ENSMUST00000189573 Kdm5dQ62240 1548 aa11.61□□□□□ -0.55
Gm28540-202ENSMUST00000189573 Ier5lQ99J55 406 aa11.6□□□□□ -0.55
Gm28540-202ENSMUST00000189573 PsdQ5DTT2 1024 aa11.59□□□□□ -0.55
Gm28540-202ENSMUST00000189573 Dcaf1Q80TR8 1506 aa11.54□□□□□ -0.56
Gm28540-202ENSMUST00000189573 Fkbp4P30416 458 aa11.53□□□□□ -0.56
Gm28540-202ENSMUST00000189573 Pdzrn4E9PUZ9 1014 aa11.52□□□□□ -0.56
Gm28540-202ENSMUST00000189573 Adnp2Q8CHC8 1165 aaKnown RBP11.52□□□□□ -0.56
Gm28540-202ENSMUST00000189573 Zbtb22Q9Z0G7 638 aa11.52□□□□□ -0.56
Gm28540-202ENSMUST00000189573 Rtl1Q7M732 1744 aa11.49□□□□□ -0.57
Gm28540-202ENSMUST00000189573 Ankrd65F6YK91 380 aa11.48□□□□□ -0.57
Gm28540-202ENSMUST00000189573 ElnP54320 860 aa11.48□□□□□ -0.57
Gm28540-202ENSMUST00000189573 Gga1Q8R0H9 635 aa11.45□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Stk3Q9JI10 497 aa11.45□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Gm11563B1AQ90 168 aa11.43□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Krtap4-7Q9D732 168 aa11.43□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Tox2A2A472 547 aa11.41□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Apba1B2RUJ5 842 aa11.41□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Slc4a2P13808 1237 aaKnown RBP11.41□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Cypt1Q8CH20 168 aa11.41□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Nap1l5Q9JJF0 156 aa11.41□□□□□ -0.58
Gm28540-202ENSMUST00000189573 Otop3Q80UF9 577 aa11.38□□□□□ -0.59
Gm28540-202ENSMUST00000189573 Sall2Q9QX96 1004 aa11.38□□□□□ -0.59
Gm28540-202ENSMUST00000189573 Sycp2Q9CUU3 1500 aa11.38□□□□□ -0.59
Gm28540-202ENSMUST00000189573 Thap8E9Q695 213 aa11.37□□□□□ -0.59
Gm28540-202ENSMUST00000189573 Dnm1lQ8K1M6 742 aa11.37□□□□□ -0.59
Gm28540-202ENSMUST00000189573 Gm11555B1AQ89 175 aa11.33□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Rgl2Q61193 778 aa11.33□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Rsph6aQ8CDR2 708 aa11.32□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Rb1cc1Q9ESK9 1588 aa11.32□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Smpd1Q04519 627 aa11.31□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Stk24Q99KH8 431 aa11.3□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Mnx1Q9QZW9 404 aa11.3□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Ccdc180J3QNE4 1664 aa11.28□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Hoxa2P31245 372 aa11.27□□□□□ -0.6
Gm28540-202ENSMUST00000189573 Sptlc1O35704 473 aa11.26□□□□□ -0.61
Gm28540-202ENSMUST00000189573 Mier1Q5UAK0 511 aa11.26□□□□□ -0.61
Gm28540-202ENSMUST00000189573 RragcQ99K70 398 aa11.25□□□□□ -0.61
Gm28540-202ENSMUST00000189573 Stk25Q9Z2W1 426 aa11.25□□□□□ -0.61
Gm28540-202ENSMUST00000189573 Neurod1Q60867 357 aa11.24□□□□□ -0.61
Gm28540-202ENSMUST00000189573 Kdm2aP59997 1161 aa11.23□□□□□ -0.61
Gm28540-202ENSMUST00000189573 Onecut3Q8K557 490 aa11.23□□□□□ -0.61
Gm28540-202ENSMUST00000189573 UncxO08934 530 aa11.22□□□□□ -0.61
Gm28540-202ENSMUST00000189573 Setdb2Q8C267 713 aa11.2□□□□□ -0.62
Gm28540-202ENSMUST00000189573 Rnf166Q3U9F6 237 aa11.19□□□□□ -0.62
Gm28540-202ENSMUST00000189573 BicraF8VPZ9 1578 aa11.19□□□□□ -0.62
Gm28540-202ENSMUST00000189573 Prdm10Q3UTQ7 1184 aa11.19□□□□□ -0.62
Gm28540-202ENSMUST00000189573 Baz1aO88379 1555 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 97.5 ms