RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Camsap1A2AHC3 1581 aa13.09□□□□□ -0.31
Hmgcs1-201ENSMUST00000179869 NclP09405 707 aaKnown RBP13.09□□□□□ -0.31
Hmgcs1-201ENSMUST00000179869 Unc13aQ4KUS2 1712 aa13.09□□□□□ -0.31
Hmgcs1-201ENSMUST00000179869 Fkbp15Q6P9Q6 1216 aaKnown RBP13.07□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Rad54l2Q99NG0 1466 aa13.07□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Grin2bQ01097 1482 aa13.06□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Lamc3Q9R0B6 1581 aa13.06□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 TnnQ80Z71 1560 aa13.05□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Zbtb7cQ8VCZ7 619 aa13.05□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 LrpprcQ6PB66 1392 aaKnown RBP13.04□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Slc24a1Q91WD8 1130 aa13.04□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 NrkQ9R0G8 1455 aa13.03□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Hspa5P20029 655 aaKnown RBP13.02□□□□□ -0.32
Hmgcs1-201ENSMUST00000179869 Ncapd3Q6ZQK0 1506 aa13.02□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Aebp1Q640N1 1128 aa13.01□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Dhx29Q6PGC1 1365 aaKnown RBP13.01□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 CenpbP27790 599 aa12.99□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Mroh2bQ7M6Y6 1581 aa12.98□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Naip1Q9QWK5 1403 aa12.98□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Duox2A2AQ99 1517 aa12.98□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Eif4g1Q6NZJ6 1600 aaKnown RBP12.98□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Arhgef5E9Q7D5 1581 aa12.96□□□□□ -0.33
Hmgcs1-201ENSMUST00000179869 Cux1P53564 1515 aa12.96□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Sin3aQ60520 1274 aaKnown RBP12.92□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Ifnlr1Q8CGK5 535 aa12.92□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Arhgap27A2AB59 869 aa12.91□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 PogzQ8BZH4 1409 aaKnown RBP12.91□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Aplp2Q06335 707 aa12.9□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Carmil1Q6EDY6 1374 aa12.9□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Slx4Q6P1D7 1565 aa12.9□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Rpap1Q80TE0 1409 aa12.9□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 SafbD3YXK2 937 aaKnown RBP12.9□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Pcf11G3X9Z4 1553 aa12.9□□□□□ -0.34
Hmgcs1-201ENSMUST00000179869 Zbtb4Q5F293 982 aa12.89□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Ankrd26Q811D2 1581 aa12.89□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Hnrnpul2Q00PI9 745 aaKnown RBP12.87□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Tiam1Q60610 1591 aa12.86□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Efcab5A0JP43 1406 aa12.85□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 3425401B19RikD3Z1D3 1412 aa12.85□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Zfp644E9QA22 1323 aa12.84□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Samd9lQ69Z37 1561 aa12.84□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Map3k1P53349 1493 aa12.84□□□□□ -0.35
Hmgcs1-201ENSMUST00000179869 Mrc2Q64449 1479 aa12.82□□□□□ -0.36
Hmgcs1-201ENSMUST00000179869 Ccnb3Q810T2 1396 aa12.82□□□□□ -0.36
Hmgcs1-201ENSMUST00000179869 Cabp1Q9JLK7 227 aa12.81□□□□□ -0.36
Hmgcs1-201ENSMUST00000179869 CntlnA2AM05 1397 aa12.81□□□□□ -0.36
Hmgcs1-201ENSMUST00000179869 Kif27Q7M6Z4 1394 aa12.81□□□□□ -0.36
Hmgcs1-201ENSMUST00000179869 Plb1Q3TTY0 1478 aa12.79□□□□□ -0.36
Hmgcs1-201ENSMUST00000179869 Fyco1Q8VDC1 1437 aa12.76□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 Urb2E9Q7L1 1524 aaKnown RBP12.74□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 WrnO09053 1401 aa12.73□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 Fam71e1A1L3C1 212 aa12.73□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 CadpsQ80TJ1 1355 aa12.73□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 SynmQ70IV5 1561 aa12.73□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 EprsQ8CGC7 1512 aaKnown RBP12.73□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 Gm7298A0A0N4SVU1 1476 aa12.72□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 Eif5bQ05D44 1216 aaKnown RBP12.71□□□□□ -0.37
Hmgcs1-201ENSMUST00000179869 Gm1043A0A140LJC2 1431 aa12.71□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Kif21aQ9QXL2 1672 aa12.71□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Kdm5bQ80Y84 1544 aa12.7□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Rgl3Q3UYI5 709 aa12.7□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Crocc2F6XLV1 1638 aa12.69□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Pla2r1Q62028 1487 aa12.68□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 A2mQ6GQT1 1474 aa12.68□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Mphosph9A6H5Y1 991 aa12.67□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 PxdnQ3UQ28 1475 aa12.67□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Tnnt3Q9QZ47 272 aa12.67□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Grwd1Q810D6 446 aaKnown RBP12.66□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Gpatch8A2A6A1 1505 aa12.66□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Grin2aP35436 1464 aa12.65□□□□□ -0.38
Hmgcs1-201ENSMUST00000179869 Pkd2O35245 966 aa12.64□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Lmo7E9PYF4 1699 aaKnown RBP12.63□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Erich3F6QRE9 1637 aa12.62□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Mia2Q91ZV0 1396 aa12.62□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Naip2Q9QUK4 1447 aa12.61□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Magi3Q9EQJ9 1476 aa12.61□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 AknaQ80VW7 1404 aa12.61□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Disp1Q3TDN0 1521 aa12.61□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 P3h3Q8CG70 732 aa12.61□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 WizO88286 1684 aaKnown RBP12.6□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 NexmifQ5DTT1 1515 aa12.6□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 BC005561E9Q5E2 1589 aa12.6□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Trak1Q6PD31 939 aa12.6□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Lrriq1Q0P5X1 1673 aa12.59□□□□□ -0.39
Hmgcs1-201ENSMUST00000179869 Wwc2Q6NXJ0 1187 aa12.58□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Fhad1A6PWD2 1420 aa12.58□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 TchhA0A0B4J1F9 1599 aa12.57□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Ncoa3O09000 1398 aa12.57□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Stra8P70278 393 aa12.57□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Mtus2Q3UHD3 1353 aa12.57□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Erich6D3Z6S9 713 aa12.56□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Ccer2J3QPU5 274 aa12.56□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Tdrd9Q14BI7 1383 aa12.56□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Prdm10Q3UTQ7 1184 aa12.56□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Eif4g3Q80XI3 1579 aaKnown RBP12.56□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Mrs2Q5NCE8 434 aa12.55□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Pelp1Q9DBD5 1123 aaKnown RBP12.54□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Vps8Q0P5W1 1427 aa12.54□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Rrp7aQ9D1C9 280 aaKnown RBP12.54□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Usp47Q8BY87 1376 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 1768.3 ms