RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Gpatch8A2A6A1 1505 aa32.05■■■□□ 2.72
Lig3-209ENSMUST00000173009 Clip1Q922J3 1391 aa32.04■■■□□ 2.72
Lig3-209ENSMUST00000173009 EprsQ8CGC7 1512 aaKnown RBP32.02■■■□□ 2.72
Lig3-209ENSMUST00000173009 Shroom2A2ALU4 1481 aa31.98■■■□□ 2.71
Lig3-209ENSMUST00000173009 Pabpn1Q8CCS6 302 aaKnown RBP31.94■■■□□ 2.7
Lig3-209ENSMUST00000173009 Fgd6Q69ZL1 1399 aa31.93■■■□□ 2.7
Lig3-209ENSMUST00000173009 WizO88286 1684 aaKnown RBP31.91■■■□□ 2.7
Lig3-209ENSMUST00000173009 Arhgap27A2AB59 869 aa31.89■■■□□ 2.69
Lig3-209ENSMUST00000173009 Pelp1Q9DBD5 1123 aaKnown RBP31.88■■■□□ 2.69
Lig3-209ENSMUST00000173009 Adamts12Q811B3 1600 aa31.87■■■□□ 2.69
Lig3-209ENSMUST00000173009 PxdnQ3UQ28 1475 aa31.87■■■□□ 2.69
Lig3-209ENSMUST00000173009 TchhA0A0B4J1F9 1599 aa31.86■■■□□ 2.69
Lig3-209ENSMUST00000173009 CadpsQ80TJ1 1355 aa31.83■■■□□ 2.69
Lig3-209ENSMUST00000173009 Abca16E9PWJ7 1678 aa31.83■■■□□ 2.69
Lig3-209ENSMUST00000173009 Polr1aO35134 1717 aaKnown RBP31.81■■■□□ 2.68
Lig3-209ENSMUST00000173009 Rpap1Q80TE0 1409 aa31.79■■■□□ 2.68
Lig3-209ENSMUST00000173009 Cux1P53564 1515 aa31.79■■■□□ 2.68
Lig3-209ENSMUST00000173009 Abcc2Q8VI47 1543 aa31.79■■■□□ 2.68
Lig3-209ENSMUST00000173009 Gm7298A0A0N4SVU1 1476 aa31.78■■■□□ 2.68
Lig3-209ENSMUST00000173009 AknaQ80VW7 1404 aa31.76■■■□□ 2.68
Lig3-209ENSMUST00000173009 Fyco1Q8VDC1 1437 aa31.69■■■□□ 2.66
Lig3-209ENSMUST00000173009 Soga1E1U8D0 1418 aa31.68■■■□□ 2.66
Lig3-209ENSMUST00000173009 Dnmt1P13864 1620 aaKnown RBP31.66■■■□□ 2.66
Lig3-209ENSMUST00000173009 Map3k4O08648 1597 aa31.63■■■□□ 2.65
Lig3-209ENSMUST00000173009 Ankrd26Q811D2 1581 aa31.63■■■□□ 2.65
Lig3-209ENSMUST00000173009 Setd5Q5XJV7 1441 aa31.6■■■□□ 2.65
Lig3-209ENSMUST00000173009 Neo1P97798 1493 aa31.6■■■□□ 2.65
Lig3-209ENSMUST00000173009 Abca5Q8K448 1642 aa31.59■■■□□ 2.65
Lig3-209ENSMUST00000173009 Abcc1O35379 1528 aa31.58■■■□□ 2.65
Lig3-209ENSMUST00000173009 Eea1Q8BL66 1411 aa31.55■■■□□ 2.64
Lig3-209ENSMUST00000173009 BC005561E9Q5E2 1589 aa31.54■■■□□ 2.64
Lig3-209ENSMUST00000173009 Slx4Q6P1D7 1565 aa31.53■■■□□ 2.64
Lig3-209ENSMUST00000173009 WrnO09053 1401 aa31.52■■■□□ 2.64
Lig3-209ENSMUST00000173009 Ap3b1Q9Z1T1 1105 aa31.51■■■□□ 2.63
Lig3-209ENSMUST00000173009 Aebp1Q640N1 1128 aa31.47■■■□□ 2.63
Lig3-209ENSMUST00000173009 Jph4Q80WT0 628 aa31.46■■■□□ 2.63
Lig3-209ENSMUST00000173009 Col17a1Q07563 1470 aa31.46■■■□□ 2.63
Lig3-209ENSMUST00000173009 Gm14025A2AP89 1413 aa31.44■■■□□ 2.62
Lig3-209ENSMUST00000173009 Dnajc5P60904 198 aa31.43■■■□□ 2.62
Lig3-209ENSMUST00000173009 Gapvd1Q6PAR5 1458 aa31.42■■■□□ 2.62
Lig3-209ENSMUST00000173009 Erich3F6QRE9 1637 aa31.41■■■□□ 2.62
Lig3-209ENSMUST00000173009 Chd1P40201 1711 aa31.4■■■□□ 2.62
Lig3-209ENSMUST00000173009 Ythdc2B2RR83 1445 aaKnown RBP31.39■■■□□ 2.62
Lig3-209ENSMUST00000173009 Arap1Q4LDD4 1452 aa31.34■■■□□ 2.61
Lig3-209ENSMUST00000173009 Arhgef12Q8R4H2 1543 aaKnown RBP31.33■■■□□ 2.61
Lig3-209ENSMUST00000173009 Cep170Q6A065 1588 aa31.31■■■□□ 2.6
Lig3-209ENSMUST00000173009 Lmo7E9PYF4 1699 aaKnown RBP31.31■■■□□ 2.6
Lig3-209ENSMUST00000173009 Fkbp15Q6P9Q6 1216 aaKnown RBP31.3■■■□□ 2.6
Lig3-209ENSMUST00000173009 Pcf11G3X9Z4 1553 aa31.29■■■□□ 2.6
Lig3-209ENSMUST00000173009 Gm156Q58A37 223 aa31.27■■■□□ 2.6
Lig3-209ENSMUST00000173009 PtprtQ99M80 1454 aa31.26■■■□□ 2.6
Lig3-209ENSMUST00000173009 Zcchc11B2RX14 1644 aaKnown RBP31.26■■■□□ 2.6
Lig3-209ENSMUST00000173009 BlmO88700 1416 aa31.26■■■□□ 2.59
Lig3-209ENSMUST00000173009 Kif27Q7M6Z4 1394 aa31.24■■■□□ 2.59
Lig3-209ENSMUST00000173009 Arhgap31A6X8Z5 1425 aa31.2■■■□□ 2.59
Lig3-209ENSMUST00000173009 Adgrl3Q80TS3 1537 aa31.19■■■□□ 2.58
Lig3-209ENSMUST00000173009 Arhgef5E9Q7D5 1581 aa31.19■■■□□ 2.58
Lig3-209ENSMUST00000173009 CntlnA2AM05 1397 aa31.19■■■□□ 2.58
Lig3-209ENSMUST00000173009 Rrbp1Q99PL5 1605 aaKnown RBP31.16■■■□□ 2.58
Lig3-209ENSMUST00000173009 Ccdc141E9Q8Q6 1531 aa31.09■■■□□ 2.57
Lig3-209ENSMUST00000173009 Rapgef6Q5NCJ1 1609 aa31.08■■■□□ 2.57
Lig3-209ENSMUST00000173009 Ifnlr1Q8CGK5 535 aa31.07■■■□□ 2.56
Lig3-209ENSMUST00000173009 Plekhg3Q4VAC9 1341 aa31.07■■■□□ 2.56
Lig3-209ENSMUST00000173009 Lmod2Q3UHZ5 550 aa31.07■■■□□ 2.56
Lig3-209ENSMUST00000173009 Naip1Q9QWK5 1403 aa31.06■■■□□ 2.56
Lig3-209ENSMUST00000173009 Kdm5bQ80Y84 1544 aa31.02■■■□□ 2.56
Lig3-209ENSMUST00000173009 AI481877A2ALV5 1481 aa31.01■■■□□ 2.56
Lig3-209ENSMUST00000173009 Ncoa2Q61026 1462 aa31.01■■■□□ 2.56
Lig3-209ENSMUST00000173009 Tiam1Q60610 1591 aa30.99■■■□□ 2.55
Lig3-209ENSMUST00000173009 Igf1rQ60751 1373 aa30.98■■■□□ 2.55
Lig3-209ENSMUST00000173009 Gm1043A0A140LJC2 1431 aa30.95■■■□□ 2.55
Lig3-209ENSMUST00000173009 Mroh2aD3Z750 1679 aa30.94■■■□□ 2.54
Lig3-209ENSMUST00000173009 Ncoa3O09000 1398 aa30.93■■■□□ 2.54
Lig3-209ENSMUST00000173009 Arhgef11Q68FM7 1552 aa30.91■■■□□ 2.54
Lig3-209ENSMUST00000173009 Ttbk1Q6PCN3 1308 aa30.91■■■□□ 2.54
Lig3-209ENSMUST00000173009 Magi1Q6RHR9 1471 aa30.9■■■□□ 2.54
Lig3-209ENSMUST00000173009 Peg3Q3URU2 1571 aa30.9■■■□□ 2.54
Lig3-209ENSMUST00000173009 Mug1P28665 1476 aa30.88■■■□□ 2.53
Lig3-209ENSMUST00000173009 Setbp1Q9Z180 1582 aa30.84■■■□□ 2.53
Lig3-209ENSMUST00000173009 Fancd2Q80V62 1450 aa30.84■■■□□ 2.53
Lig3-209ENSMUST00000173009 Fam163aQ8CAA5 168 aa30.84■■■□□ 2.53
Lig3-209ENSMUST00000173009 Arid3cA6PWV5 409 aa30.83■■■□□ 2.53
Lig3-209ENSMUST00000173009 NhsB1AV60 1647 aa30.83■■■□□ 2.53
Lig3-209ENSMUST00000173009 Ehmt2Q9Z148 1263 aaKnown RBP30.82■■■□□ 2.52
Lig3-209ENSMUST00000173009 Cul7Q8VE73 1689 aa30.81■■■□□ 2.52
Lig3-209ENSMUST00000173009 Gcc2Q8CHG3 1679 aa30.81■■■□□ 2.52
Lig3-209ENSMUST00000173009 Znf608Q56A10 1511 aa30.8■■■□□ 2.52
Lig3-209ENSMUST00000173009 Pprc1Q6NZN1 1644 aa30.79■■■□□ 2.52
Lig3-209ENSMUST00000173009 Lrrc9Q8CDN9 1456 aa30.79■■■□□ 2.52
Lig3-209ENSMUST00000173009 Dhx57Q6P5D3 1388 aaKnown RBP30.79■■■□□ 2.52
Lig3-209ENSMUST00000173009 Atp10dQ8K2X1 1416 aa30.77■■■□□ 2.52
Lig3-209ENSMUST00000173009 Wdr7Q920I9 1489 aa30.77■■■□□ 2.52
Lig3-209ENSMUST00000173009 Prex2Q3LAC4 1598 aa30.75■■■□□ 2.51
Lig3-209ENSMUST00000173009 Ak9G3UYQ4 1894 aa30.74■■■□□ 2.51
Lig3-209ENSMUST00000173009 Kiaa1551Q5DTW7 1521 aa30.71■■■□□ 2.51
Lig3-209ENSMUST00000173009 NexmifQ5DTT1 1515 aa30.7■■■□□ 2.51
Lig3-209ENSMUST00000173009 Ppp1r18Q8BQ30 594 aa30.69■■■□□ 2.5
Lig3-209ENSMUST00000173009 Kiaa1210E9Q0C6 1637 aa30.68■■■□□ 2.5
Lig3-209ENSMUST00000173009 Mapkbp1Q6NS57 1503 aa30.68■■■□□ 2.5
Lig3-209ENSMUST00000173009 Cdc42bpaQ3UU96 1719 aa30.67■■■□□ 2.5
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms