RNA–Protein interactions for RNA: ENSMUST00000146543.8

Smim1-212, Transcript of Small integral membrane protein 1, mousemouse

TSL 1 (best) BASIC

Gene Smim1, Length 839 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1-212ENSMUST00000146543 Pla2r1Q62028 1487 aa30.98■■■□□ 2.55
Smim1-212ENSMUST00000146543 Ccdc88bQ4QRL3 1481 aa30.96■■■□□ 2.55
Smim1-212ENSMUST00000146543 CadpsQ80TJ1 1355 aa30.96■■■□□ 2.55
Smim1-212ENSMUST00000146543 Top2aQ01320 1528 aaKnown RBP30.92■■■□□ 2.54
Smim1-212ENSMUST00000146543 Gpatch8A2A6A1 1505 aa30.9■■■□□ 2.54
Smim1-212ENSMUST00000146543 Shroom4Q1W617 1475 aa30.89■■■□□ 2.53
Smim1-212ENSMUST00000146543 Rapgef2Q8CHG7 1496 aa30.89■■■□□ 2.53
Smim1-212ENSMUST00000146543 SynmQ70IV5 1561 aa30.88■■■□□ 2.53
Smim1-212ENSMUST00000146543 Pprc1Q6NZN1 1644 aa30.87■■■□□ 2.53
Smim1-212ENSMUST00000146543 Soga1E1U8D0 1418 aa30.82■■■□□ 2.52
Smim1-212ENSMUST00000146543 Arhgap27A2AB59 869 aa30.77■■■□□ 2.52
Smim1-212ENSMUST00000146543 Chd1P40201 1711 aa30.76■■■□□ 2.52
Smim1-212ENSMUST00000146543 Zeb1Q64318 1117 aa30.76■■■□□ 2.51
Smim1-212ENSMUST00000146543 Dnmt1P13864 1620 aaKnown RBP30.75■■■□□ 2.51
Smim1-212ENSMUST00000146543 Chic1Q8CBW7 227 aa30.73■■■□□ 2.51
Smim1-212ENSMUST00000146543 Neo1P97798 1493 aa30.72■■■□□ 2.51
Smim1-212ENSMUST00000146543 Setbp1Q9Z180 1582 aa30.69■■■□□ 2.5
Smim1-212ENSMUST00000146543 Abcc2Q8VI47 1543 aa30.68■■■□□ 2.5
Smim1-212ENSMUST00000146543 Gm14025A2AP89 1413 aa30.66■■■□□ 2.5
Smim1-212ENSMUST00000146543 Ppp1r18Q8BQ30 594 aa30.64■■■□□ 2.5
Smim1-212ENSMUST00000146543 PxdnQ3UQ28 1475 aa30.63■■■□□ 2.49
Smim1-212ENSMUST00000146543 Map3k4O08648 1597 aa30.62■■■□□ 2.49
Smim1-212ENSMUST00000146543 TchhA0A0B4J1F9 1599 aa30.6■■■□□ 2.49
Smim1-212ENSMUST00000146543 Abca16E9PWJ7 1678 aa30.59■■■□□ 2.49
Smim1-212ENSMUST00000146543 BC005561E9Q5E2 1589 aa30.59■■■□□ 2.49
Smim1-212ENSMUST00000146543 AI481877A2ALV5 1481 aa30.56■■■□□ 2.48
Smim1-212ENSMUST00000146543 WizO88286 1684 aaKnown RBP30.55■■■□□ 2.48
Smim1-212ENSMUST00000146543 EprsQ8CGC7 1512 aaKnown RBP30.54■■■□□ 2.48
Smim1-212ENSMUST00000146543 Adamts12Q811B3 1600 aa30.51■■■□□ 2.48
Smim1-212ENSMUST00000146543 Mroh2bQ7M6Y6 1581 aa30.46■■■□□ 2.47
Smim1-212ENSMUST00000146543 Ifnlr1Q8CGK5 535 aa30.46■■■□□ 2.47
Smim1-212ENSMUST00000146543 Arhgef12Q8R4H2 1543 aaKnown RBP30.42■■■□□ 2.46
Smim1-212ENSMUST00000146543 Slx4Q6P1D7 1565 aa30.42■■■□□ 2.46
Smim1-212ENSMUST00000146543 Ak9G3UYQ4 1894 aa30.42■■■□□ 2.46
Smim1-212ENSMUST00000146543 Jph4Q80WT0 628 aa30.41■■■□□ 2.46
Smim1-212ENSMUST00000146543 Eif4g1Q6NZJ6 1600 aaKnown RBP30.38■■■□□ 2.45
Smim1-212ENSMUST00000146543 Npm2Q80W85 207 aa30.38■■■□□ 2.45
Smim1-212ENSMUST00000146543 Rpap1Q80TE0 1409 aa30.35■■■□□ 2.45
Smim1-212ENSMUST00000146543 Plekhg3Q4VAC9 1341 aa30.28■■■□□ 2.44
Smim1-212ENSMUST00000146543 Carmil1Q6EDY6 1374 aa30.28■■■□□ 2.44
Smim1-212ENSMUST00000146543 Fkbp15Q6P9Q6 1216 aaKnown RBP30.27■■■□□ 2.44
Smim1-212ENSMUST00000146543 Clasp1Q80TV8 1535 aaKnown RBP30.27■■■□□ 2.44
Smim1-212ENSMUST00000146543 Gm7298A0A0N4SVU1 1476 aa30.26■■■□□ 2.44
Smim1-212ENSMUST00000146543 Arid3cA6PWV5 409 aa30.21■■■□□ 2.43
Smim1-212ENSMUST00000146543 Map3k1P53349 1493 aa30.2■■■□□ 2.43
Smim1-212ENSMUST00000146543 Igf1rQ60751 1373 aa30.17■■■□□ 2.42
Smim1-212ENSMUST00000146543 Ttc37F8VPK0 1563 aa30.16■■■□□ 2.42
Smim1-212ENSMUST00000146543 AdgbG3UZ78 1657 aa30.13■■■□□ 2.41
Smim1-212ENSMUST00000146543 Mapkbp1Q6NS57 1503 aa30.12■■■□□ 2.41
Smim1-212ENSMUST00000146543 WrnO09053 1401 aa30.11■■■□□ 2.41
Smim1-212ENSMUST00000146543 Lrrc9Q8CDN9 1456 aa30.09■■■□□ 2.41
Smim1-212ENSMUST00000146543 Abca5Q8K448 1642 aa30.07■■■□□ 2.4
Smim1-212ENSMUST00000146543 Depdc5P61460 1591 aa30.05■■■□□ 2.4
Smim1-212ENSMUST00000146543 Kdm5bQ80Y84 1544 aa30.04■■■□□ 2.4
Smim1-212ENSMUST00000146543 Arhgap35Q91YM2 1499 aa30.04■■■□□ 2.4
Smim1-212ENSMUST00000146543 Arhgef11Q68FM7 1552 aa30■■■□□ 2.39
Smim1-212ENSMUST00000146543 Znf608Q56A10 1511 aa30■■■□□ 2.39
Smim1-212ENSMUST00000146543 Polr1aO35134 1717 aaKnown RBP29.99■■■□□ 2.39
Smim1-212ENSMUST00000146543 Zfyve16Q80U44 1528 aa29.99■■■□□ 2.39
Smim1-212ENSMUST00000146543 Rrbp1Q99PL5 1605 aaKnown RBP29.98■■■□□ 2.39
Smim1-212ENSMUST00000146543 Wdr7Q920I9 1489 aa29.93■■■□□ 2.38
Smim1-212ENSMUST00000146543 Plppr3Q7TPB0 716 aa29.91■■■□□ 2.38
Smim1-212ENSMUST00000146543 Fndc1E9Q043 1732 aa29.88■■■□□ 2.37
Smim1-212ENSMUST00000146543 Alpk3Q924C5 1678 aa29.87■■■□□ 2.37
Smim1-212ENSMUST00000146543 Cux1P53564 1515 aa29.86■■■□□ 2.37
Smim1-212ENSMUST00000146543 Clip1Q922J3 1391 aa29.86■■■□□ 2.37
Smim1-212ENSMUST00000146543 Gab3Q8BSM5 595 aa29.84■■■□□ 2.37
Smim1-212ENSMUST00000146543 Arhgap31A6X8Z5 1425 aa29.83■■■□□ 2.37
Smim1-212ENSMUST00000146543 Dnajc5gQ8C632 165 aa29.81■■■□□ 2.36
Smim1-212ENSMUST00000146543 Atp10dQ8K2X1 1416 aa29.78■■■□□ 2.36
Smim1-212ENSMUST00000146543 Fyco1Q8VDC1 1437 aa29.78■■■□□ 2.36
Smim1-212ENSMUST00000146543 NhsB1AV60 1647 aa29.78■■■□□ 2.36
Smim1-212ENSMUST00000146543 Ccdc141E9Q8Q6 1531 aa29.71■■■□□ 2.35
Smim1-212ENSMUST00000146543 AglF8VPN4 1532 aa29.71■■■□□ 2.35
Smim1-212ENSMUST00000146543 Cul7Q8VE73 1689 aa29.68■■■□□ 2.34
Smim1-212ENSMUST00000146543 Cep162Q6ZQ06 1403 aa29.65■■■□□ 2.34
Smim1-212ENSMUST00000146543 Myt1lP97500 1187 aa29.63■■■□□ 2.33
Smim1-212ENSMUST00000146543 MlecQ6ZQI3 291 aaKnown RBP29.63■■■□□ 2.33
Smim1-212ENSMUST00000146543 Mroh2aD3Z750 1679 aa29.53■■■□□ 2.32
Smim1-212ENSMUST00000146543 Fancd2Q80V62 1450 aa29.52■■■□□ 2.32
Smim1-212ENSMUST00000146543 Gcc2Q8CHG3 1679 aa29.5■■■□□ 2.31
Smim1-212ENSMUST00000146543 Rnf17Q99MV7 1640 aa29.49■■■□□ 2.31
Smim1-212ENSMUST00000146543 Ncoa2Q61026 1462 aa29.49■■■□□ 2.31
Smim1-212ENSMUST00000146543 A2mQ6GQT1 1474 aa29.49■■■□□ 2.31
Smim1-212ENSMUST00000146543 Aebp1Q640N1 1128 aa29.49■■■□□ 2.31
Smim1-212ENSMUST00000146543 BlmO88700 1416 aa29.47■■■□□ 2.31
Smim1-212ENSMUST00000146543 Kiaa1210E9Q0C6 1637 aa29.47■■■□□ 2.31
Smim1-212ENSMUST00000146543 Abca8bQ8K440 1620 aa29.47■■■□□ 2.31
Smim1-212ENSMUST00000146543 Cyb5rlB1AS42 316 aa29.44■■■□□ 2.3
Smim1-212ENSMUST00000146543 Rapgef6Q5NCJ1 1609 aa29.43■■■□□ 2.3
Smim1-212ENSMUST00000146543 Kif27Q7M6Z4 1394 aa29.42■■■□□ 2.3
Smim1-212ENSMUST00000146543 Ankrd26Q811D2 1581 aa29.4■■■□□ 2.3
Smim1-212ENSMUST00000146543 Magi1Q6RHR9 1471 aa29.38■■■□□ 2.29
Smim1-212ENSMUST00000146543 Kdm6bQ5NCY0 1641 aa29.38■■■□□ 2.29
Smim1-212ENSMUST00000146543 Arap1Q4LDD4 1452 aa29.36■■■□□ 2.29
Smim1-212ENSMUST00000146543 HrcG5E8J6 738 aa29.36■■■□□ 2.29
Smim1-212ENSMUST00000146543 Naip2Q9QUK4 1447 aa29.35■■■□□ 2.29
Smim1-212ENSMUST00000146543 Mlh3A0A1Y7VMP7 1443 aa29.3■■■□□ 2.28
Smim1-212ENSMUST00000146543 Brwd3A2AHJ4 1799 aa29.26■■■□□ 2.28
Smim1-212ENSMUST00000146543 Fam163aQ8CAA5 168 aa29.25■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms