RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Dhx29Q6PGC1 1365 aaKnown RBP15.87■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 Shroom4Q1W617 1475 aa15.85■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 NrkQ9R0G8 1455 aa15.85■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 PogzQ8BZH4 1409 aaKnown RBP15.84■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 ClspnQ80YR7 1315 aa15.84■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 Duox2A2AQ99 1517 aa15.82■□□□□ 0.12
Prpf40b-202ENSMUST00000118287 Eif4g1Q6NZJ6 1600 aaKnown RBP15.8■□□□□ 0.12
Prpf40b-202ENSMUST00000118287 Arhgap35Q91YM2 1499 aa15.77■□□□□ 0.12
Prpf40b-202ENSMUST00000118287 Crocc2F6XLV1 1638 aa15.75■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 Aplp2Q06335 707 aa15.75■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 Pknox2Q8BG99 474 aa15.74■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 Efcab5A0JP43 1406 aa15.74■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 Samd9lQ69Z37 1561 aa15.73■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 TonslQ6NZL6 1363 aa15.73■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 Plb1Q3TTY0 1478 aa15.71■□□□□ 0.11
Prpf40b-202ENSMUST00000118287 Rad54l2Q99NG0 1466 aa15.69■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Clip1Q922J3 1391 aa15.68■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Mroh2bQ7M6Y6 1581 aa15.68■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Urb2E9Q7L1 1524 aaKnown RBP15.67■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Lrriq1Q0P5X1 1673 aa15.66■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Plekhg3Q4VAC9 1341 aa15.66■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Gtf3c5Q8R2T8 520 aa15.65■□□□□ 0.1
Prpf40b-202ENSMUST00000118287 Ifnlr1Q8CGK5 535 aa15.64■□□□□ 0.09
Prpf40b-202ENSMUST00000118287 Map3k1P53349 1493 aa15.6■□□□□ 0.09
Prpf40b-202ENSMUST00000118287 SynmQ70IV5 1561 aa15.59■□□□□ 0.09
Prpf40b-202ENSMUST00000118287 ArxO35085 564 aa15.58■□□□□ 0.08
Prpf40b-202ENSMUST00000118287 Ap3b1Q9Z1T1 1105 aa15.58■□□□□ 0.08
Prpf40b-202ENSMUST00000118287 Eid3Q3V124 375 aa15.55■□□□□ 0.08
Prpf40b-202ENSMUST00000118287 Disp1Q3TDN0 1521 aa15.55■□□□□ 0.08
Prpf40b-202ENSMUST00000118287 Carmil1Q6EDY6 1374 aa15.52■□□□□ 0.08
Prpf40b-202ENSMUST00000118287 Magi3Q9EQJ9 1476 aa15.52■□□□□ 0.08
Prpf40b-202ENSMUST00000118287 Pla2r1Q62028 1487 aa15.51■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 AqrQ8CFQ3 1481 aaKnown RBP15.5■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Ncapd3Q6ZQK0 1506 aa15.5■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Grin2aP35436 1464 aa15.5■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Setd5Q5XJV7 1441 aa15.49■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Setd1bQ8CFT2 1985 aa15.49■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Cux1P53564 1515 aa15.49■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Ift140E9PY46 1464 aa15.49■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 SafbD3YXK2 937 aaKnown RBP15.48■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Mapk8ip2Q9ERE9 830 aa15.48■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Eea1Q8BL66 1411 aa15.47■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Hnrnpul2Q00PI9 745 aaKnown RBP15.46■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Ankrd26Q811D2 1581 aa15.46■□□□□ 0.07
Prpf40b-202ENSMUST00000118287 Arap1Q4LDD4 1452 aa15.45■□□□□ 0.06
Prpf40b-202ENSMUST00000118287 BccipQ9CWI3 316 aa15.42■□□□□ 0.06
Prpf40b-202ENSMUST00000118287 EprsQ8CGC7 1512 aaKnown RBP15.42■□□□□ 0.06
Prpf40b-202ENSMUST00000118287 Nup160Q9Z0W3 1402 aaKnown RBP15.41■□□□□ 0.06
Prpf40b-202ENSMUST00000118287 Fam71e1A1L3C1 212 aa15.41■□□□□ 0.06
Prpf40b-202ENSMUST00000118287 Eif5bQ05D44 1216 aaKnown RBP15.4■□□□□ 0.06
Prpf40b-202ENSMUST00000118287 Fgd1P52734 960 aa15.39■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 WizO88286 1684 aaKnown RBP15.38■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Eif4g3Q80XI3 1579 aaKnown RBP15.36■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Rpap1Q80TE0 1409 aa15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Erich3F6QRE9 1637 aa15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Pcf11G3X9Z4 1553 aa15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Fyco1Q8VDC1 1437 aa15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Pbrm1Q8BSQ9 1634 aaKnown RBP15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Arhgef5E9Q7D5 1581 aa15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 PxdnQ3UQ28 1475 aa15.35■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 NrdcQ8BHG1 1161 aa15.34■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Polr1aO35134 1717 aaKnown RBP15.34■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 CadpsQ80TJ1 1355 aa15.34■□□□□ 0.05
Prpf40b-202ENSMUST00000118287 Rusc2Q80U22 1514 aa15.33■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 TimelessQ9R1X4 1197 aa15.32■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Gm7298A0A0N4SVU1 1476 aa15.32■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Cc2d2bA0A286YDU8 1405 aa15.32■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Lmod2Q3UHZ5 550 aa15.31■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Arhgap27A2AB59 869 aa15.31■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Adamts12Q811B3 1600 aa15.31■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Lmo7E9PYF4 1699 aaKnown RBP15.3■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Abca16E9PWJ7 1678 aa15.3■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Tnnt3Q9QZ47 272 aa15.3■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Aebp1Q640N1 1128 aa15.29■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 TchhA0A0B4J1F9 1599 aa15.29■□□□□ 0.04
Prpf40b-202ENSMUST00000118287 Kdm5bQ80Y84 1544 aa15.26■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Abca5Q8K448 1642 aa15.26■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Slx4Q6P1D7 1565 aa15.26■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Naip1Q9QWK5 1403 aa15.26■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Tiam1Q60610 1591 aa15.25■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 BlmO88700 1416 aa15.25■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Gpatch8A2A6A1 1505 aa15.23■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Abcc2Q8VI47 1543 aa15.23■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 NclP09405 707 aaKnown RBP15.22■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Soga1E1U8D0 1418 aa15.22■□□□□ 0.03
Prpf40b-202ENSMUST00000118287 Hdac5Q9Z2V6 1113 aa15.21■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 WrnO09053 1401 aa15.2■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 CntlnA2AM05 1397 aa15.19■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 Fam50aQ9WV03 339 aaKnown RBP15.19■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 AknaQ80VW7 1404 aa15.16■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 Kif27Q7M6Z4 1394 aa15.15■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 Slc24a1Q91WD8 1130 aa15.15■□□□□ 0.02
Prpf40b-202ENSMUST00000118287 Shroom2A2ALU4 1481 aa15.14■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Gm1043A0A140LJC2 1431 aa15.12■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 BC005561E9Q5E2 1589 aa15.12■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Neo1P97798 1493 aa15.12■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Fkbp15Q6P9Q6 1216 aaKnown RBP15.11■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Znf710Q3U288 666 aa15.11■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Peg3Q3URU2 1571 aa15.11■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Fgd6Q69ZL1 1399 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms