RNA–Protein interactions for RNA: ENSMUST00000111356.7

Nr1h3-204, Transcript of Oxysterols receptor LXR-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nr1h3, Length 1,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3-204ENSMUST00000111356 Erich3F6QRE9 1637 aa28.23■■■□□ 2.11
Nr1h3-204ENSMUST00000111356 Rad54l2Q99NG0 1466 aa28.19■■■□□ 2.1
Nr1h3-204ENSMUST00000111356 Ift140E9PY46 1464 aa28.18■■■□□ 2.1
Nr1h3-204ENSMUST00000111356 Disp1Q3TDN0 1521 aa28.17■■■□□ 2.1
Nr1h3-204ENSMUST00000111356 Ap3b1Q9Z1T1 1105 aa28.16■■■□□ 2.1
Nr1h3-204ENSMUST00000111356 NefmP08553 848 aa28.15■■■□□ 2.1
Nr1h3-204ENSMUST00000111356 Cux1P53564 1515 aa28.14■■■□□ 2.1
Nr1h3-204ENSMUST00000111356 Eif4g3Q80XI3 1579 aaKnown RBP28.13■■■□□ 2.09
Nr1h3-204ENSMUST00000111356 Tiam1Q60610 1591 aa28.09■■■□□ 2.09
Nr1h3-204ENSMUST00000111356 Polr1aO35134 1717 aaKnown RBP28.09■■■□□ 2.09
Nr1h3-204ENSMUST00000111356 Setd1bQ8CFT2 1985 aa28.07■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Rpap1Q80TE0 1409 aa28.06■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Fyco1Q8VDC1 1437 aa28.06■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Magi3Q9EQJ9 1476 aa28.05■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Pcf11G3X9Z4 1553 aa28.04■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Lmo7E9PYF4 1699 aaKnown RBP28.04■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Naip1Q9QWK5 1403 aa28.03■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Pla2r1Q62028 1487 aa28.02■■■□□ 2.08
Nr1h3-204ENSMUST00000111356 Nup160Q9Z0W3 1402 aaKnown RBP28■■■□□ 2.07
Nr1h3-204ENSMUST00000111356 Grin2aP35436 1464 aa27.99■■■□□ 2.07
Nr1h3-204ENSMUST00000111356 Pbrm1Q8BSQ9 1634 aaKnown RBP27.98■■■□□ 2.07
Nr1h3-204ENSMUST00000111356 CntlnA2AM05 1397 aa27.97■■■□□ 2.07
Nr1h3-204ENSMUST00000111356 EprsQ8CGC7 1512 aaKnown RBP27.96■■■□□ 2.07
Nr1h3-204ENSMUST00000111356 Ncapd3Q6ZQK0 1506 aa27.94■■■□□ 2.06
Nr1h3-204ENSMUST00000111356 BlmO88700 1416 aa27.93■■■□□ 2.06
Nr1h3-204ENSMUST00000111356 Rusc2Q80U22 1514 aa27.93■■■□□ 2.06
Nr1h3-204ENSMUST00000111356 Slx4Q6P1D7 1565 aa27.9■■■□□ 2.06
Nr1h3-204ENSMUST00000111356 Aebp1Q640N1 1128 aa27.88■■■□□ 2.05
Nr1h3-204ENSMUST00000111356 Gpatch8A2A6A1 1505 aa27.86■■■□□ 2.05
Nr1h3-204ENSMUST00000111356 Cc2d2bA0A286YDU8 1405 aa27.86■■■□□ 2.05
Nr1h3-204ENSMUST00000111356 CadpsQ80TJ1 1355 aa27.84■■■□□ 2.05
Nr1h3-204ENSMUST00000111356 Peg3Q3URU2 1571 aa27.83■■■□□ 2.05
Nr1h3-204ENSMUST00000111356 Gm7298A0A0N4SVU1 1476 aa27.78■■■□□ 2.04
Nr1h3-204ENSMUST00000111356 Adamts12Q811B3 1600 aa27.78■■■□□ 2.04
Nr1h3-204ENSMUST00000111356 Abca5Q8K448 1642 aa27.77■■■□□ 2.04
Nr1h3-204ENSMUST00000111356 WizO88286 1684 aaKnown RBP27.73■■■□□ 2.03
Nr1h3-204ENSMUST00000111356 Lmod2Q3UHZ5 550 aa27.71■■■□□ 2.03
Nr1h3-204ENSMUST00000111356 Gm1043A0A140LJC2 1431 aa27.68■■■□□ 2.02
Nr1h3-204ENSMUST00000111356 Soga1E1U8D0 1418 aa27.68■■■□□ 2.02
Nr1h3-204ENSMUST00000111356 TchhA0A0B4J1F9 1599 aa27.65■■■□□ 2.02
Nr1h3-204ENSMUST00000111356 PxdnQ3UQ28 1475 aa27.63■■■□□ 2.01
Nr1h3-204ENSMUST00000111356 Abca16E9PWJ7 1678 aa27.6■■■□□ 2.01
Nr1h3-204ENSMUST00000111356 Kif27Q7M6Z4 1394 aa27.56■■■□□ 2
Nr1h3-204ENSMUST00000111356 Kdm5bQ80Y84 1544 aa27.55■■■□□ 2
Nr1h3-204ENSMUST00000111356 Pcgf6Q99NA9 353 aa27.54■■■□□ 2
Nr1h3-204ENSMUST00000111356 Abcc2Q8VI47 1543 aa27.53■■■□□ 2
Nr1h3-204ENSMUST00000111356 3425401B19RikD3Z1D3 1412 aa27.53■■■□□ 2
Nr1h3-204ENSMUST00000111356 WrnO09053 1401 aa27.47■■□□□ 1.99
Nr1h3-204ENSMUST00000111356 Arhgap27A2AB59 869 aa27.47■■□□□ 1.99
Nr1h3-204ENSMUST00000111356 Fgd6Q69ZL1 1399 aa27.45■■□□□ 1.98
Nr1h3-204ENSMUST00000111356 Lmtk2Q3TYD6 1471 aa27.44■■□□□ 1.98
Nr1h3-204ENSMUST00000111356 Las1lA2BE28 776 aaKnown RBP27.4■■□□□ 1.98
Nr1h3-204ENSMUST00000111356 Supt5hO55201 1082 aaKnown RBP27.4■■□□□ 1.98
Nr1h3-204ENSMUST00000111356 Shroom2A2ALU4 1481 aa27.39■■□□□ 1.98
Nr1h3-204ENSMUST00000111356 Dnmt1P13864 1620 aaKnown RBP27.39■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 Ccnb3Q810T2 1396 aa27.38■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 Fam50aQ9WV03 339 aaKnown RBP27.37■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 Map3k4O08648 1597 aa27.36■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 TonslQ6NZL6 1363 aa27.35■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 BC005561E9Q5E2 1589 aa27.34■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 Mia2Q91ZV0 1396 aa27.33■■□□□ 1.97
Nr1h3-204ENSMUST00000111356 Rapgef6Q5NCJ1 1609 aa27.31■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 NexmifQ5DTT1 1515 aa27.31■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 Fhad1A6PWD2 1420 aa27.29■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 Naip2Q9QUK4 1447 aa27.29■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 AknaQ80VW7 1404 aa27.28■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 Gcc2Q8CHG3 1679 aa27.27■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 Mug1P28665 1476 aa27.27■■□□□ 1.96
Nr1h3-204ENSMUST00000111356 A2mQ6GQT1 1474 aa27.26■■□□□ 1.95
Nr1h3-204ENSMUST00000111356 Ncoa3O09000 1398 aa27.25■■□□□ 1.95
Nr1h3-204ENSMUST00000111356 Neo1P97798 1493 aa27.25■■□□□ 1.95
Nr1h3-204ENSMUST00000111356 Vps8Q0P5W1 1427 aa27.22■■□□□ 1.95
Nr1h3-204ENSMUST00000111356 Pabpn1Q8CCS6 302 aaKnown RBP27.21■■□□□ 1.95
Nr1h3-204ENSMUST00000111356 Arhgap31A6X8Z5 1425 aa27.19■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Ccer2J3QPU5 274 aa27.18■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Arhgef11Q68FM7 1552 aa27.18■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Abcc1O35379 1528 aa27.18■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Eid3Q3V124 375 aa27.16■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Zcchc11B2RX14 1644 aaKnown RBP27.15■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Ncoa2Q61026 1462 aa27.14■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Pelp1Q9DBD5 1123 aaKnown RBP27.14■■□□□ 1.94
Nr1h3-204ENSMUST00000111356 Chd1P40201 1711 aa27.12■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 UacaQ8CGB3 1411 aa27.11■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Kiaa1551Q5DTW7 1521 aa27.09■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Jph4Q80WT0 628 aa27.09■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Arhgef12Q8R4H2 1543 aaKnown RBP27.09■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Dhx57Q6P5D3 1388 aaKnown RBP27.09■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Ccdc141E9Q8Q6 1531 aa27.08■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Cdc42bpaQ3UU96 1719 aa27.08■■□□□ 1.93
Nr1h3-204ENSMUST00000111356 Fam163aQ8CAA5 168 aa27.07■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Gm14025A2AP89 1413 aa27.07■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Magi1Q6RHR9 1471 aa27.06■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Sall2Q9QX96 1004 aa27.06■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Aebp2Q9Z248 504 aaKnown RBP27.06■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Chic2Q9D9G3 165 aa27.05■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Ankrd36D3Z4K0 1415 aa27.03■■□□□ 1.92
Nr1h3-204ENSMUST00000111356 Mroh2aD3Z750 1679 aa27.01■■□□□ 1.91
Nr1h3-204ENSMUST00000111356 Mapkbp1Q6NS57 1503 aa27■■□□□ 1.91
Nr1h3-204ENSMUST00000111356 Arhgef40Q3UPH7 1517 aa27■■□□□ 1.91
Nr1h3-204ENSMUST00000111356 Rrbp1Q99PL5 1605 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms