RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 SynmQ70IV5 1561 aa12.65□□□□□ -0.38
Cd44-208ENSMUST00000111198 PtprkP35822 1457 aa12.65□□□□□ -0.39
Cd44-208ENSMUST00000111198 Pla2r1Q62028 1487 aa12.64□□□□□ -0.39
Cd44-208ENSMUST00000111198 Adgrl3Q80TS3 1537 aa12.62□□□□□ -0.39
Cd44-208ENSMUST00000111198 Cep170Q6A065 1588 aa12.62□□□□□ -0.39
Cd44-208ENSMUST00000111198 Gapvd1Q6PAR5 1458 aa12.61□□□□□ -0.39
Cd44-208ENSMUST00000111198 AknaQ80VW7 1404 aa12.58□□□□□ -0.4
Cd44-208ENSMUST00000111198 Arhgef5E9Q7D5 1581 aa12.58□□□□□ -0.4
Cd44-208ENSMUST00000111198 Abcc1O35379 1528 aa12.58□□□□□ -0.4
Cd44-208ENSMUST00000111198 Gm156Q58A37 223 aa12.56□□□□□ -0.4
Cd44-208ENSMUST00000111198 Zeb1Q64318 1117 aa12.54□□□□□ -0.4
Cd44-208ENSMUST00000111198 CadpsQ80TJ1 1355 aa12.54□□□□□ -0.4
Cd44-208ENSMUST00000111198 Chd1P40201 1711 aa12.54□□□□□ -0.4
Cd44-208ENSMUST00000111198 Dnmt1P13864 1620 aaKnown RBP12.53□□□□□ -0.4
Cd44-208ENSMUST00000111198 Abca16E9PWJ7 1678 aa12.52□□□□□ -0.41
Cd44-208ENSMUST00000111198 PtprtQ99M80 1454 aa12.52□□□□□ -0.41
Cd44-208ENSMUST00000111198 TchhA0A0B4J1F9 1599 aa12.52□□□□□ -0.41
Cd44-208ENSMUST00000111198 Ythdc2B2RR83 1445 aaKnown RBP12.51□□□□□ -0.41
Cd44-208ENSMUST00000111198 Ttbk1Q6PCN3 1308 aa12.51□□□□□ -0.41
Cd44-208ENSMUST00000111198 WizO88286 1684 aaKnown RBP12.5□□□□□ -0.41
Cd44-208ENSMUST00000111198 Mroh2bQ7M6Y6 1581 aa12.5□□□□□ -0.41
Cd44-208ENSMUST00000111198 Adamts12Q811B3 1600 aa12.5□□□□□ -0.41
Cd44-208ENSMUST00000111198 Abcc2Q8VI47 1543 aa12.49□□□□□ -0.41
Cd44-208ENSMUST00000111198 Map3k4O08648 1597 aa12.49□□□□□ -0.41
Cd44-208ENSMUST00000111198 Soga1E1U8D0 1418 aa12.48□□□□□ -0.41
Cd44-208ENSMUST00000111198 BC005561E9Q5E2 1589 aa12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 EprsQ8CGC7 1512 aaKnown RBP12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 Neo1P97798 1493 aa12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 PxdnQ3UQ28 1475 aa12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 Rapgef2Q8CHG7 1496 aa12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 Arhgap27A2AB59 869 aa12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 Pcdh10E9PXQ7 1057 aa12.47□□□□□ -0.41
Cd44-208ENSMUST00000111198 Pprc1Q6NZN1 1644 aa12.46□□□□□ -0.42
Cd44-208ENSMUST00000111198 DiexfQ8BTT6 772 aaKnown RBP12.45□□□□□ -0.42
Cd44-208ENSMUST00000111198 Npm2Q80W85 207 aa12.45□□□□□ -0.42
Cd44-208ENSMUST00000111198 Gm14025A2AP89 1413 aa12.44□□□□□ -0.42
Cd44-208ENSMUST00000111198 Eif4g1Q6NZJ6 1600 aaKnown RBP12.41□□□□□ -0.42
Cd44-208ENSMUST00000111198 Setbp1Q9Z180 1582 aa12.41□□□□□ -0.42
Cd44-208ENSMUST00000111198 Acin1Q9JIX8 1338 aaKnown RBP12.41□□□□□ -0.42
Cd44-208ENSMUST00000111198 Carmil1Q6EDY6 1374 aa12.4□□□□□ -0.42
Cd44-208ENSMUST00000111198 Slx4Q6P1D7 1565 aa12.4□□□□□ -0.42
Cd44-208ENSMUST00000111198 Phf23Q8BSN5 401 aa12.4□□□□□ -0.42
Cd44-208ENSMUST00000111198 Map3k1P53349 1493 aa12.39□□□□□ -0.43
Cd44-208ENSMUST00000111198 Arhgef12Q8R4H2 1543 aaKnown RBP12.38□□□□□ -0.43
Cd44-208ENSMUST00000111198 AI481877A2ALV5 1481 aa12.38□□□□□ -0.43
Cd44-208ENSMUST00000111198 Rpap1Q80TE0 1409 aa12.37□□□□□ -0.43
Cd44-208ENSMUST00000111198 Gm7298A0A0N4SVU1 1476 aa12.36□□□□□ -0.43
Cd44-208ENSMUST00000111198 Polr1aO35134 1717 aaKnown RBP12.36□□□□□ -0.43
Cd44-208ENSMUST00000111198 Ak9G3UYQ4 1894 aa12.36□□□□□ -0.43
Cd44-208ENSMUST00000111198 Arhgap35Q91YM2 1499 aa12.35□□□□□ -0.43
Cd44-208ENSMUST00000111198 Abca5Q8K448 1642 aa12.34□□□□□ -0.43
Cd44-208ENSMUST00000111198 Jph4Q80WT0 628 aa12.33□□□□□ -0.44
Cd44-208ENSMUST00000111198 Ppp1r18Q8BQ30 594 aa12.3□□□□□ -0.44
Cd44-208ENSMUST00000111198 HrcG5E8J6 738 aa12.29□□□□□ -0.44
Cd44-208ENSMUST00000111198 Rrbp1Q99PL5 1605 aaKnown RBP12.28□□□□□ -0.44
Cd44-208ENSMUST00000111198 Gab3Q8BSM5 595 aa12.28□□□□□ -0.44
Cd44-208ENSMUST00000111198 WrnO09053 1401 aa12.27□□□□□ -0.45
Cd44-208ENSMUST00000111198 Clip1Q922J3 1391 aa12.26□□□□□ -0.45
Cd44-208ENSMUST00000111198 Ifnlr1Q8CGK5 535 aa12.25□□□□□ -0.45
Cd44-208ENSMUST00000111198 Cux1P53564 1515 aa12.25□□□□□ -0.45
Cd44-208ENSMUST00000111198 Clasp1Q80TV8 1535 aaKnown RBP12.25□□□□□ -0.45
Cd44-208ENSMUST00000111198 Kdm5bQ80Y84 1544 aa12.24□□□□□ -0.45
Cd44-208ENSMUST00000111198 Igf1rQ60751 1373 aa12.24□□□□□ -0.45
Cd44-208ENSMUST00000111198 Cep162Q6ZQ06 1403 aa12.23□□□□□ -0.45
Cd44-208ENSMUST00000111198 Fkbp15Q6P9Q6 1216 aaKnown RBP12.23□□□□□ -0.45
Cd44-208ENSMUST00000111198 Fyco1Q8VDC1 1437 aa12.23□□□□□ -0.45
Cd44-208ENSMUST00000111198 Ttc37F8VPK0 1563 aa12.22□□□□□ -0.45
Cd44-208ENSMUST00000111198 AdgbG3UZ78 1657 aa12.22□□□□□ -0.45
Cd44-208ENSMUST00000111198 Lrrc9Q8CDN9 1456 aa12.22□□□□□ -0.45
Cd44-208ENSMUST00000111198 ArxO35085 564 aa12.19□□□□□ -0.46
Cd44-208ENSMUST00000111198 Mapkbp1Q6NS57 1503 aa12.19□□□□□ -0.46
Cd44-208ENSMUST00000111198 Arid3cA6PWV5 409 aa12.18□□□□□ -0.46
Cd44-208ENSMUST00000111198 Wdr7Q920I9 1489 aa12.17□□□□□ -0.46
Cd44-208ENSMUST00000111198 NhsB1AV60 1647 aa12.17□□□□□ -0.46
Cd44-208ENSMUST00000111198 Cul7Q8VE73 1689 aa12.16□□□□□ -0.46
Cd44-208ENSMUST00000111198 Znf608Q56A10 1511 aa12.16□□□□□ -0.46
Cd44-208ENSMUST00000111198 Arhgap31A6X8Z5 1425 aa12.16□□□□□ -0.46
Cd44-208ENSMUST00000111198 Myt1lP97500 1187 aa12.16□□□□□ -0.46
Cd44-208ENSMUST00000111198 Ccdc141E9Q8Q6 1531 aa12.15□□□□□ -0.46
Cd44-208ENSMUST00000111198 Depdc5P61460 1591 aa12.15□□□□□ -0.47
Cd44-208ENSMUST00000111198 Zfyve16Q80U44 1528 aa12.13□□□□□ -0.47
Cd44-208ENSMUST00000111198 Fam71e1A1L3C1 212 aa12.13□□□□□ -0.47
Cd44-208ENSMUST00000111198 Arhgef11Q68FM7 1552 aa12.12□□□□□ -0.47
Cd44-208ENSMUST00000111198 Ankrd26Q811D2 1581 aa12.12□□□□□ -0.47
Cd44-208ENSMUST00000111198 Atp10dQ8K2X1 1416 aa12.1□□□□□ -0.47
Cd44-208ENSMUST00000111198 Gcc2Q8CHG3 1679 aa12.1□□□□□ -0.47
Cd44-208ENSMUST00000111198 Mroh2aD3Z750 1679 aa12.09□□□□□ -0.47
Cd44-208ENSMUST00000111198 Rapgef6Q5NCJ1 1609 aa12.08□□□□□ -0.48
Cd44-208ENSMUST00000111198 Ncoa2Q61026 1462 aa12.08□□□□□ -0.48
Cd44-208ENSMUST00000111198 Kiaa1210E9Q0C6 1637 aa12.08□□□□□ -0.48
Cd44-208ENSMUST00000111198 Fndc1E9Q043 1732 aa12.07□□□□□ -0.48
Cd44-208ENSMUST00000111198 AglF8VPN4 1532 aa12.07□□□□□ -0.48
Cd44-208ENSMUST00000111198 BlmO88700 1416 aa12.07□□□□□ -0.48
Cd44-208ENSMUST00000111198 Aebp1Q640N1 1128 aa12.06□□□□□ -0.48
Cd44-208ENSMUST00000111198 Fancd2Q80V62 1450 aa12.05□□□□□ -0.48
Cd44-208ENSMUST00000111198 Plekhg3Q4VAC9 1341 aa12.05□□□□□ -0.48
Cd44-208ENSMUST00000111198 Abca8bQ8K440 1620 aa12.05□□□□□ -0.48
Cd44-208ENSMUST00000111198 Kif27Q7M6Z4 1394 aa12.04□□□□□ -0.48
Cd44-208ENSMUST00000111198 Erich3F6QRE9 1637 aa12.04□□□□□ -0.48
Cd44-208ENSMUST00000111198 Arap1Q4LDD4 1452 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms