RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Shroom4Q1W617 1475 aa11.57□□□□□ -0.56
Bdnf-208ENSMUST00000111049 NrkQ9R0G8 1455 aa11.57□□□□□ -0.56
Bdnf-208ENSMUST00000111049 Hnrnpul2Q00PI9 745 aaKnown RBP11.56□□□□□ -0.56
Bdnf-208ENSMUST00000111049 Arhgef5E9Q7D5 1581 aa11.56□□□□□ -0.56
Bdnf-208ENSMUST00000111049 Pelp1Q9DBD5 1123 aaKnown RBP11.53□□□□□ -0.56
Bdnf-208ENSMUST00000111049 Map3k1P53349 1493 aa11.53□□□□□ -0.56
Bdnf-208ENSMUST00000111049 Ubl4bQ9CQ84 188 aa11.52□□□□□ -0.56
Bdnf-208ENSMUST00000111049 Eif4g1Q6NZJ6 1600 aaKnown RBP11.52□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Mia2Q91ZV0 1396 aa11.51□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Anp32aO35381 247 aa11.51□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Frmpd1A2AKB4 1549 aa11.5□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Hspa5P20029 655 aaKnown RBP11.5□□□□□ -0.57
Bdnf-208ENSMUST00000111049 TnnQ80Z71 1560 aa11.5□□□□□ -0.57
Bdnf-208ENSMUST00000111049 CntlnA2AM05 1397 aa11.5□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Naip1Q9QWK5 1403 aa11.5□□□□□ -0.57
Bdnf-208ENSMUST00000111049 SafbD3YXK2 937 aaKnown RBP11.5□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Tiam1Q60610 1591 aa11.49□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Gm13697A2AK42 830 aa11.49□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Fyco1Q8VDC1 1437 aa11.47□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Chic2Q9D9G3 165 aa11.47□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Lamc3Q9R0B6 1581 aa11.47□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Carmil1Q6EDY6 1374 aa11.46□□□□□ -0.57
Bdnf-208ENSMUST00000111049 Mroh2bQ7M6Y6 1581 aa11.46□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Fam71e1A1L3C1 212 aa11.45□□□□□ -0.58
Bdnf-208ENSMUST00000111049 NrdcQ8BHG1 1161 aa11.45□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Wdr62Q3U3T8 1523 aa11.45□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Camsap1A2AHC3 1581 aa11.45□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Eif5bQ05D44 1216 aaKnown RBP11.44□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Calr4Q3TQS0 420 aa11.44□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Grin2bQ01097 1482 aa11.44□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Aebp1Q640N1 1128 aa11.43□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Cux2P70298 1426 aa11.42□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Dnajc5bQ9CQ94 199 aa11.41□□□□□ -0.58
Bdnf-208ENSMUST00000111049 Fhad1A6PWD2 1420 aa11.4□□□□□ -0.59
Bdnf-208ENSMUST00000111049 AqrQ8CFQ3 1481 aaKnown RBP11.39□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Ankrd36D3Z4K0 1415 aa11.39□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Efcab5A0JP43 1406 aa11.38□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Phldb1Q6PDH0 1371 aaKnown RBP11.37□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Plppr3Q7TPB0 716 aa11.37□□□□□ -0.59
Bdnf-208ENSMUST00000111049 LrpprcQ6PB66 1392 aaKnown RBP11.37□□□□□ -0.59
Bdnf-208ENSMUST00000111049 UacaQ8CGB3 1411 aa11.37□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Pcf11G3X9Z4 1553 aa11.37□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Rtl5Q5DTT4 599 aa11.36□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Sin3aQ60520 1274 aaKnown RBP11.36□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Amer1Q7TS75 1132 aa11.36□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Ankrd26Q811D2 1581 aa11.36□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Znf710Q3U288 666 aa11.36□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Kdm5bQ80Y84 1544 aa11.35□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Mrs2Q5NCE8 434 aa11.35□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Rpap1Q80TE0 1409 aa11.35□□□□□ -0.59
Bdnf-208ENSMUST00000111049 TchhA0A0B4J1F9 1599 aa11.34□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Vps8Q0P5W1 1427 aa11.34□□□□□ -0.59
Bdnf-208ENSMUST00000111049 Slx4Q6P1D7 1565 aa11.33□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Erich3F6QRE9 1637 aa11.3□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Cux1P53564 1515 aa11.3□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Smg6P61406 1418 aaKnown RBP11.3□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Dhx29Q6PGC1 1365 aaKnown RBP11.3□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Ccnb3Q810T2 1396 aa11.3□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Kif27Q7M6Z4 1394 aa11.29□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Duox2A2AQ99 1517 aa11.29□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Ppp4r2Q0VGB7 417 aa11.29□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Mphosph9A6H5Y1 991 aa11.28□□□□□ -0.6
Bdnf-208ENSMUST00000111049 3425401B19RikD3Z1D3 1412 aa11.28□□□□□ -0.6
Bdnf-208ENSMUST00000111049 Wdr43Q6ZQL4 677 aaKnown RBP11.28□□□□□ -0.6
Bdnf-208ENSMUST00000111049 PogzQ8BZH4 1409 aaKnown RBP11.27□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Polr1aO35134 1717 aaKnown RBP11.26□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Naip2Q9QUK4 1447 aa11.25□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Gm7298A0A0N4SVU1 1476 aa11.24□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Pkd2O35245 966 aa11.24□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Cabp1Q9JLK7 227 aa11.23□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Anp32bQ9EST5 272 aaKnown RBP11.22□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Wwc2Q6NXJ0 1187 aa11.22□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Urb2E9Q7L1 1524 aaKnown RBP11.22□□□□□ -0.61
Bdnf-208ENSMUST00000111049 Rad54l2Q99NG0 1466 aa11.21□□□□□ -0.61
Bdnf-208ENSMUST00000111049 P3h3Q8CG70 732 aa11.2□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Nolc1E9Q5C9 702 aaKnown RBP11.2□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Lmo7E9PYF4 1699 aaKnown RBP11.19□□□□□ -0.62
Bdnf-208ENSMUST00000111049 A2mQ6GQT1 1474 aa11.19□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Rgl3Q3UYI5 709 aa11.19□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Mtus2Q3UHD3 1353 aa11.19□□□□□ -0.62
Bdnf-208ENSMUST00000111049 SynmQ70IV5 1561 aa11.19□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Gm13695A2AK44 830 aa11.18□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Gm1043A0A140LJC2 1431 aa11.18□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Usp47Q8BY87 1376 aa11.17□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Exoc6Q8R313 802 aa11.17□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Cwc22Q8C5N3 908 aaKnown RBP11.17□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Naip5Q9R016 1403 aa11.17□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Supt16hQ920B9 1047 aa11.16□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Peg3Q3URU2 1571 aa11.16□□□□□ -0.62
Bdnf-208ENSMUST00000111049 Camsap2Q8C1B1 1461 aa11.15□□□□□ -0.62
Bdnf-208ENSMUST00000111049 NeflP08551 543 aa11.15□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Crocc2F6XLV1 1638 aa11.14□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Plekhh2Q8C115 1491 aa11.14□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Unc13aQ4KUS2 1712 aa11.14□□□□□ -0.63
Bdnf-208ENSMUST00000111049 CatipB9EKE5 520 aa11.14□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Ofd1Q80Z25 1017 aa11.14□□□□□ -0.63
Bdnf-208ENSMUST00000111049 EprsQ8CGC7 1512 aaKnown RBP11.14□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Zbtb7cQ8VCZ7 619 aa11.13□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Arhgap27A2AB59 869 aa11.12□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Card11Q8CIS0 1159 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms