RNA–Protein interactions for RNA: ENSMUST00000109268.1

Ebf1-203, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf1, Length 2,864 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-203ENSMUST00000109268 Naip1Q9QWK5 1403 aa23.76■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Baz1bQ9Z277 1479 aa23.76■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Grin2bQ01097 1482 aa23.75■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Ercc6F8VPZ5 1481 aa23.75■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Mroh2bQ7M6Y6 1581 aa23.73■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Aplp2Q06335 707 aa23.72■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Ankrd26Q811D2 1581 aa23.71■■□□□ 1.39
Ebf1-203ENSMUST00000109268 Slx4Q6P1D7 1565 aa23.67■■□□□ 1.38
Ebf1-203ENSMUST00000109268 Pcf11G3X9Z4 1553 aa23.66■■□□□ 1.38
Ebf1-203ENSMUST00000109268 Erich3F6QRE9 1637 aa23.63■■□□□ 1.37
Ebf1-203ENSMUST00000109268 TchhA0A0B4J1F9 1599 aa23.61■■□□□ 1.37
Ebf1-203ENSMUST00000109268 NclP09405 707 aaKnown RBP23.57■■□□□ 1.36
Ebf1-203ENSMUST00000109268 Cux1P53564 1515 aa23.54■■□□□ 1.36
Ebf1-203ENSMUST00000109268 Hnrnpul2Q00PI9 745 aaKnown RBP23.54■■□□□ 1.36
Ebf1-203ENSMUST00000109268 CenpbP27790 599 aa23.53■■□□□ 1.36
Ebf1-203ENSMUST00000109268 Cux2P70298 1426 aa23.53■■□□□ 1.36
Ebf1-203ENSMUST00000109268 Npm1Q61937 292 aaKnown RBP23.52■■□□□ 1.36
Ebf1-203ENSMUST00000109268 3425401B19RikD3Z1D3 1412 aa23.51■■□□□ 1.35
Ebf1-203ENSMUST00000109268 Lmo7E9PYF4 1699 aaKnown RBP23.48■■□□□ 1.35
Ebf1-203ENSMUST00000109268 Hspa5P20029 655 aaKnown RBP23.48■■□□□ 1.35
Ebf1-203ENSMUST00000109268 Ubl4bQ9CQ84 188 aa23.46■■□□□ 1.35
Ebf1-203ENSMUST00000109268 Carmil1Q6EDY6 1374 aa23.46■■□□□ 1.35
Ebf1-203ENSMUST00000109268 CntlnA2AM05 1397 aa23.45■■□□□ 1.34
Ebf1-203ENSMUST00000109268 Rpap1Q80TE0 1409 aa23.45■■□□□ 1.34
Ebf1-203ENSMUST00000109268 SafbD3YXK2 937 aaKnown RBP23.44■■□□□ 1.34
Ebf1-203ENSMUST00000109268 Phldb1Q6PDH0 1371 aaKnown RBP23.39■■□□□ 1.34
Ebf1-203ENSMUST00000109268 Efcab5A0JP43 1406 aa23.38■■□□□ 1.33
Ebf1-203ENSMUST00000109268 LrpprcQ6PB66 1392 aaKnown RBP23.37■■□□□ 1.33
Ebf1-203ENSMUST00000109268 Fyco1Q8VDC1 1437 aa23.36■■□□□ 1.33
Ebf1-203ENSMUST00000109268 Duox2A2AQ99 1517 aa23.36■■□□□ 1.33
Ebf1-203ENSMUST00000109268 Aebp1Q640N1 1128 aa23.36■■□□□ 1.33
Ebf1-203ENSMUST00000109268 Urb2E9Q7L1 1524 aaKnown RBP23.34■■□□□ 1.33
Ebf1-203ENSMUST00000109268 Ube2uB1AUC4 352 aa23.33■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Dhx29Q6PGC1 1365 aaKnown RBP23.32■■□□□ 1.32
Ebf1-203ENSMUST00000109268 PogzQ8BZH4 1409 aaKnown RBP23.32■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Fhad1A6PWD2 1420 aa23.31■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Tnnt3Q9QZ47 272 aa23.29■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Chic2Q9D9G3 165 aa23.29■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Mia2Q91ZV0 1396 aa23.28■■□□□ 1.32
Ebf1-203ENSMUST00000109268 UacaQ8CGB3 1411 aa23.28■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Gm7298A0A0N4SVU1 1476 aa23.27■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Gm1043A0A140LJC2 1431 aa23.27■■□□□ 1.32
Ebf1-203ENSMUST00000109268 Rad54l2Q99NG0 1466 aa23.25■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Vps8Q0P5W1 1427 aa23.24■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Naip2Q9QUK4 1447 aa23.24■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Sin3aQ60520 1274 aaKnown RBP23.23■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Ankrd36D3Z4K0 1415 aa23.23■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Ccer2J3QPU5 274 aa23.23■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Peg3Q3URU2 1571 aa23.23■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Samd9lQ69Z37 1561 aa23.23■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Znf710Q3U288 666 aa23.22■■□□□ 1.31
Ebf1-203ENSMUST00000109268 Gm13697A2AK42 830 aa23.22■■□□□ 1.31
Ebf1-203ENSMUST00000109268 SynmQ70IV5 1561 aa23.21■■□□□ 1.31
Ebf1-203ENSMUST00000109268 A2mQ6GQT1 1474 aa23.19■■□□□ 1.3
Ebf1-203ENSMUST00000109268 Thoc2B1AZI6 1594 aaKnown RBP23.16■■□□□ 1.3
Ebf1-203ENSMUST00000109268 Ccnb3Q810T2 1396 aa23.14■■□□□ 1.29
Ebf1-203ENSMUST00000109268 Slc24a1Q91WD8 1130 aa23.13■■□□□ 1.29
Ebf1-203ENSMUST00000109268 Crocc2F6XLV1 1638 aa23.12■■□□□ 1.29
Ebf1-203ENSMUST00000109268 Fam71e1A1L3C1 212 aa23.11■■□□□ 1.29
Ebf1-203ENSMUST00000109268 Stra8P70278 393 aa23.1■■□□□ 1.29
Ebf1-203ENSMUST00000109268 Dennd4bQ3U1Y4 1499 aa23.09■■□□□ 1.29
Ebf1-203ENSMUST00000109268 Polr1aO35134 1717 aaKnown RBP23.07■■□□□ 1.28
Ebf1-203ENSMUST00000109268 Naip5Q9R016 1403 aa23.04■■□□□ 1.28
Ebf1-203ENSMUST00000109268 EprsQ8CGC7 1512 aaKnown RBP23.01■■□□□ 1.27
Ebf1-203ENSMUST00000109268 Gpatch8A2A6A1 1505 aa22.98■■□□□ 1.27
Ebf1-203ENSMUST00000109268 Kif27Q7M6Z4 1394 aa22.98■■□□□ 1.27
Ebf1-203ENSMUST00000109268 Smg6P61406 1418 aaKnown RBP22.97■■□□□ 1.27
Ebf1-203ENSMUST00000109268 Fam135aQ6NS59 1506 aa22.97■■□□□ 1.27
Ebf1-203ENSMUST00000109268 Mphosph9A6H5Y1 991 aa22.96■■□□□ 1.27
Ebf1-203ENSMUST00000109268 CadpsQ80TJ1 1355 aa22.96■■□□□ 1.27
Ebf1-203ENSMUST00000109268 Ncoa2Q61026 1462 aa22.95■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Pla2r1Q62028 1487 aa22.95■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Lmtk2Q3TYD6 1471 aa22.94■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Camsap2Q8C1B1 1461 aa22.92■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Cul7Q8VE73 1689 aa22.92■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Myt1Q8CFC2 1127 aa22.91■■□□□ 1.26
Ebf1-203ENSMUST00000109268 NexmifQ5DTT1 1515 aa22.91■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Calr4Q3TQS0 420 aa22.91■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Cabp1Q9JLK7 227 aa22.91■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Zfp644E9QA22 1323 aa22.9■■□□□ 1.26
Ebf1-203ENSMUST00000109268 BC005561E9Q5E2 1589 aa22.9■■□□□ 1.26
Ebf1-203ENSMUST00000109268 Abca5Q8K448 1642 aa22.86■■□□□ 1.25
Ebf1-203ENSMUST00000109268 Kif21aQ9QXL2 1672 aa22.85■■□□□ 1.25
Ebf1-203ENSMUST00000109268 Magi3Q9EQJ9 1476 aa22.84■■□□□ 1.25
Ebf1-203ENSMUST00000109268 Anp32aO35381 247 aa22.83■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Eif5bQ05D44 1216 aaKnown RBP22.82■■□□□ 1.24
Ebf1-203ENSMUST00000109268 WizO88286 1684 aaKnown RBP22.81■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Pkd2O35245 966 aa22.81■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Gcc2Q8CHG3 1679 aa22.8■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Nolc1E9Q5C9 702 aaKnown RBP22.79■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Fhod3Q76LL6 1578 aa22.79■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Grin2aP35436 1464 aa22.79■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Usp47Q8BY87 1376 aa22.79■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Mrs2Q5NCE8 434 aa22.78■■□□□ 1.24
Ebf1-203ENSMUST00000109268 Mug1P28665 1476 aa22.76■■□□□ 1.23
Ebf1-203ENSMUST00000109268 Pprc1Q6NZN1 1644 aa22.75■■□□□ 1.23
Ebf1-203ENSMUST00000109268 Wwc2Q6NXJ0 1187 aa22.75■■□□□ 1.23
Ebf1-203ENSMUST00000109268 Abcc5Q9R1X5 1436 aa22.74■■□□□ 1.23
Ebf1-203ENSMUST00000109268 Plb1Q3TTY0 1478 aa22.73■■□□□ 1.23
Ebf1-203ENSMUST00000109268 PxdnQ3UQ28 1475 aa22.73■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms