RNA–Protein interactions for RNA: ENSMUST00000108275.1

Ift20-202, Transcript of Intraflagellar transport protein 20 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift20, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift20-202ENSMUST00000108275 Arap1Q4LDD4 1452 aa18.61■□□□□ 0.57
Ift20-202ENSMUST00000108275 Urb2E9Q7L1 1524 aaKnown RBP18.6■□□□□ 0.57
Ift20-202ENSMUST00000108275 Rad54l2Q99NG0 1466 aa18.59■□□□□ 0.57
Ift20-202ENSMUST00000108275 Ift140E9PY46 1464 aa18.58■□□□□ 0.57
Ift20-202ENSMUST00000108275 Fyco1Q8VDC1 1437 aa18.58■□□□□ 0.57
Ift20-202ENSMUST00000108275 Lrriq1Q0P5X1 1673 aa18.55■□□□□ 0.56
Ift20-202ENSMUST00000108275 Gpatch8A2A6A1 1505 aa18.54■□□□□ 0.56
Ift20-202ENSMUST00000108275 Cux1P53564 1515 aa18.54■□□□□ 0.56
Ift20-202ENSMUST00000108275 Lmo7E9PYF4 1699 aaKnown RBP18.54■□□□□ 0.56
Ift20-202ENSMUST00000108275 Disp1Q3TDN0 1521 aa18.54■□□□□ 0.56
Ift20-202ENSMUST00000108275 Magi3Q9EQJ9 1476 aa18.53■□□□□ 0.56
Ift20-202ENSMUST00000108275 Tiam1Q60610 1591 aa18.53■□□□□ 0.56
Ift20-202ENSMUST00000108275 Pla2r1Q62028 1487 aa18.52■□□□□ 0.56
Ift20-202ENSMUST00000108275 UbtfP25976 765 aaKnown RBP18.52■□□□□ 0.56
Ift20-202ENSMUST00000108275 Mier1Q5UAK0 511 aa18.52■□□□□ 0.56
Ift20-202ENSMUST00000108275 Grin2aP35436 1464 aa18.52■□□□□ 0.55
Ift20-202ENSMUST00000108275 Setd1bQ8CFT2 1985 aa18.5■□□□□ 0.55
Ift20-202ENSMUST00000108275 CntlnA2AM05 1397 aa18.5■□□□□ 0.55
Ift20-202ENSMUST00000108275 Pcf11G3X9Z4 1553 aa18.5■□□□□ 0.55
Ift20-202ENSMUST00000108275 EprsQ8CGC7 1512 aaKnown RBP18.49■□□□□ 0.55
Ift20-202ENSMUST00000108275 Plekhg3Q4VAC9 1341 aa18.49■□□□□ 0.55
Ift20-202ENSMUST00000108275 NefmP08553 848 aa18.47■□□□□ 0.55
Ift20-202ENSMUST00000108275 Peg3Q3URU2 1571 aa18.46■□□□□ 0.55
Ift20-202ENSMUST00000108275 Nup160Q9Z0W3 1402 aaKnown RBP18.45■□□□□ 0.54
Ift20-202ENSMUST00000108275 Naip1Q9QWK5 1403 aa18.44■□□□□ 0.54
Ift20-202ENSMUST00000108275 Ap3b1Q9Z1T1 1105 aa18.44■□□□□ 0.54
Ift20-202ENSMUST00000108275 Adamts12Q811B3 1600 aa18.43■□□□□ 0.54
Ift20-202ENSMUST00000108275 Abca5Q8K448 1642 aa18.42■□□□□ 0.54
Ift20-202ENSMUST00000108275 Cc2d2bA0A286YDU8 1405 aa18.4■□□□□ 0.54
Ift20-202ENSMUST00000108275 CadpsQ80TJ1 1355 aa18.39■□□□□ 0.53
Ift20-202ENSMUST00000108275 Aebp1Q640N1 1128 aa18.38■□□□□ 0.53
Ift20-202ENSMUST00000108275 BlmO88700 1416 aa18.38■□□□□ 0.53
Ift20-202ENSMUST00000108275 Gm7298A0A0N4SVU1 1476 aa18.38■□□□□ 0.53
Ift20-202ENSMUST00000108275 WizO88286 1684 aaKnown RBP18.38■□□□□ 0.53
Ift20-202ENSMUST00000108275 TchhA0A0B4J1F9 1599 aa18.37■□□□□ 0.53
Ift20-202ENSMUST00000108275 Slx4Q6P1D7 1565 aa18.36■□□□□ 0.53
Ift20-202ENSMUST00000108275 Ncapd3Q6ZQK0 1506 aa18.35■□□□□ 0.53
Ift20-202ENSMUST00000108275 Soga1E1U8D0 1418 aa18.34■□□□□ 0.53
Ift20-202ENSMUST00000108275 Eif4g3Q80XI3 1579 aaKnown RBP18.32■□□□□ 0.52
Ift20-202ENSMUST00000108275 Abca16E9PWJ7 1678 aa18.31■□□□□ 0.52
Ift20-202ENSMUST00000108275 Rusc2Q80U22 1514 aa18.28■□□□□ 0.52
Ift20-202ENSMUST00000108275 Gm1043A0A140LJC2 1431 aa18.23■□□□□ 0.51
Ift20-202ENSMUST00000108275 PxdnQ3UQ28 1475 aa18.23■□□□□ 0.51
Ift20-202ENSMUST00000108275 Kif27Q7M6Z4 1394 aa18.21■□□□□ 0.51
Ift20-202ENSMUST00000108275 Lmod2Q3UHZ5 550 aa18.17■□□□□ 0.5
Ift20-202ENSMUST00000108275 Abcc2Q8VI47 1543 aa18.17■□□□□ 0.5
Ift20-202ENSMUST00000108275 Arhgap27A2AB59 869 aa18.15■□□□□ 0.5
Ift20-202ENSMUST00000108275 WrnO09053 1401 aa18.15■□□□□ 0.5
Ift20-202ENSMUST00000108275 Shroom2A2ALU4 1481 aa18.13■□□□□ 0.49
Ift20-202ENSMUST00000108275 Lmtk2Q3TYD6 1471 aa18.12■□□□□ 0.49
Ift20-202ENSMUST00000108275 Rapgef6Q5NCJ1 1609 aa18.12■□□□□ 0.49
Ift20-202ENSMUST00000108275 Map3k4O08648 1597 aa18.11■□□□□ 0.49
Ift20-202ENSMUST00000108275 Gcc2Q8CHG3 1679 aa18.09■□□□□ 0.49
Ift20-202ENSMUST00000108275 Dnmt1P13864 1620 aaKnown RBP18.08■□□□□ 0.48
Ift20-202ENSMUST00000108275 Kdm5bQ80Y84 1544 aa18.05■□□□□ 0.48
Ift20-202ENSMUST00000108275 Col17a1Q07563 1470 aa18.05■□□□□ 0.48
Ift20-202ENSMUST00000108275 3425401B19RikD3Z1D3 1412 aa18.05■□□□□ 0.48
Ift20-202ENSMUST00000108275 Fgd6Q69ZL1 1399 aa18.04■□□□□ 0.48
Ift20-202ENSMUST00000108275 Mia2Q91ZV0 1396 aa18.04■□□□□ 0.48
Ift20-202ENSMUST00000108275 Ncoa2Q61026 1462 aa18.04■□□□□ 0.48
Ift20-202ENSMUST00000108275 BC005561E9Q5E2 1589 aa18.03■□□□□ 0.48
Ift20-202ENSMUST00000108275 Ccnb3Q810T2 1396 aa18.03■□□□□ 0.48
Ift20-202ENSMUST00000108275 NexmifQ5DTT1 1515 aa18.02■□□□□ 0.47
Ift20-202ENSMUST00000108275 Dhx57Q6P5D3 1388 aaKnown RBP18.01■□□□□ 0.47
Ift20-202ENSMUST00000108275 Mug1P28665 1476 aa18.01■□□□□ 0.47
Ift20-202ENSMUST00000108275 Arhgef11Q68FM7 1552 aa18■□□□□ 0.47
Ift20-202ENSMUST00000108275 Ccer2J3QPU5 274 aa18■□□□□ 0.47
Ift20-202ENSMUST00000108275 Rrbp1Q99PL5 1605 aaKnown RBP18■□□□□ 0.47
Ift20-202ENSMUST00000108275 Fhad1A6PWD2 1420 aa17.99■□□□□ 0.47
Ift20-202ENSMUST00000108275 Cdc42bpaQ3UU96 1719 aa17.98■□□□□ 0.47
Ift20-202ENSMUST00000108275 Ccdc141E9Q8Q6 1531 aa17.97■□□□□ 0.47
Ift20-202ENSMUST00000108275 Arhgap31A6X8Z5 1425 aa17.97■□□□□ 0.47
Ift20-202ENSMUST00000108275 Las1lA2BE28 776 aaKnown RBP17.96■□□□□ 0.47
Ift20-202ENSMUST00000108275 Naip2Q9QUK4 1447 aa17.96■□□□□ 0.47
Ift20-202ENSMUST00000108275 Ncoa3O09000 1398 aa17.95■□□□□ 0.46
Ift20-202ENSMUST00000108275 Jph4Q80WT0 628 aa17.95■□□□□ 0.46
Ift20-202ENSMUST00000108275 Fam163aQ8CAA5 168 aa17.95■□□□□ 0.46
Ift20-202ENSMUST00000108275 Fam50aQ9WV03 339 aaKnown RBP17.94■□□□□ 0.46
Ift20-202ENSMUST00000108275 Vps8Q0P5W1 1427 aa17.94■□□□□ 0.46
Ift20-202ENSMUST00000108275 Neo1P97798 1493 aa17.93■□□□□ 0.46
Ift20-202ENSMUST00000108275 A2mQ6GQT1 1474 aa17.93■□□□□ 0.46
Ift20-202ENSMUST00000108275 Kiaa1551Q5DTW7 1521 aa17.93■□□□□ 0.46
Ift20-202ENSMUST00000108275 UacaQ8CGB3 1411 aa17.92■□□□□ 0.46
Ift20-202ENSMUST00000108275 Magi1Q6RHR9 1471 aa17.92■□□□□ 0.46
Ift20-202ENSMUST00000108275 Arhgef12Q8R4H2 1543 aaKnown RBP17.92■□□□□ 0.46
Ift20-202ENSMUST00000108275 TonslQ6NZL6 1363 aa17.91■□□□□ 0.46
Ift20-202ENSMUST00000108275 Zcchc11B2RX14 1644 aaKnown RBP17.9■□□□□ 0.46
Ift20-202ENSMUST00000108275 AknaQ80VW7 1404 aa17.9■□□□□ 0.46
Ift20-202ENSMUST00000108275 Mapkbp1Q6NS57 1503 aa17.88■□□□□ 0.45
Ift20-202ENSMUST00000108275 Pabpn1Q8CCS6 302 aaKnown RBP17.88■□□□□ 0.45
Ift20-202ENSMUST00000108275 Mroh2aD3Z750 1679 aa17.86■□□□□ 0.45
Ift20-202ENSMUST00000108275 Gm14025A2AP89 1413 aa17.85■□□□□ 0.45
Ift20-202ENSMUST00000108275 Rfx7F8VPJ6 1459 aa17.85■□□□□ 0.45
Ift20-202ENSMUST00000108275 Cdk11bP24788 784 aaKnown RBP17.84■□□□□ 0.45
Ift20-202ENSMUST00000108275 Chd1P40201 1711 aa17.83■□□□□ 0.44
Ift20-202ENSMUST00000108275 Adcy10Q8C0T9 1614 aa17.83■□□□□ 0.44
Ift20-202ENSMUST00000108275 Ankrd36D3Z4K0 1415 aa17.82■□□□□ 0.44
Ift20-202ENSMUST00000108275 Abcc1O35379 1528 aa17.82■□□□□ 0.44
Ift20-202ENSMUST00000108275 Mlh3A0A1Y7VMP7 1443 aa17.81■□□□□ 0.44
Ift20-202ENSMUST00000108275 Fancd2Q80V62 1450 aa17.8■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms