RNA–Protein interactions for RNA: ENSMUST00000107700.3

Snf8-202, Transcript of Vacuolar-sorting protein SNF8, mousemouse

TSL 2 BASIC

Gene Snf8, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8-202ENSMUST00000107700 Gpatch8A2A6A1 1505 aa46■■■■■ 4.95
Snf8-202ENSMUST00000107700 AknaQ80VW7 1404 aa45.99■■■■■ 4.95
Snf8-202ENSMUST00000107700 Abcc1O35379 1528 aa45.96■■■■■ 4.95
Snf8-202ENSMUST00000107700 SynmQ70IV5 1561 aa45.89■■■■■ 4.94
Snf8-202ENSMUST00000107700 Shroom4Q1W617 1475 aa45.89■■■■■ 4.94
Snf8-202ENSMUST00000107700 Ythdc2B2RR83 1445 aaKnown RBP45.78■■■■■ 4.92
Snf8-202ENSMUST00000107700 Chd1P40201 1711 aa45.77■■■■■ 4.92
Snf8-202ENSMUST00000107700 Pprc1Q6NZN1 1644 aa45.75■■■■■ 4.91
Snf8-202ENSMUST00000107700 CadpsQ80TJ1 1355 aa45.71■■■■■ 4.91
Snf8-202ENSMUST00000107700 Rapgef2Q8CHG7 1496 aa45.69■■■■■ 4.91
Snf8-202ENSMUST00000107700 Dnmt1P13864 1620 aaKnown RBP45.67■■■■■ 4.9
Snf8-202ENSMUST00000107700 Chic1Q8CBW7 227 aa45.61■■■■■ 4.89
Snf8-202ENSMUST00000107700 Abcc2Q8VI47 1543 aa45.57■■■■■ 4.88
Snf8-202ENSMUST00000107700 Abca16E9PWJ7 1678 aa45.57■■■■■ 4.88
Snf8-202ENSMUST00000107700 Soga1E1U8D0 1418 aa45.55■■■■■ 4.88
Snf8-202ENSMUST00000107700 Neo1P97798 1493 aa45.53■■■■■ 4.88
Snf8-202ENSMUST00000107700 BC005561E9Q5E2 1589 aa45.52■■■■■ 4.88
Snf8-202ENSMUST00000107700 Zeb1Q64318 1117 aa45.5■■■■■ 4.87
Snf8-202ENSMUST00000107700 TchhA0A0B4J1F9 1599 aa45.48■■■■■ 4.87
Snf8-202ENSMUST00000107700 Map3k4O08648 1597 aa45.48■■■■■ 4.87
Snf8-202ENSMUST00000107700 WizO88286 1684 aaKnown RBP45.47■■■■■ 4.87
Snf8-202ENSMUST00000107700 PxdnQ3UQ28 1475 aa45.46■■■■■ 4.87
Snf8-202ENSMUST00000107700 Arhgap27A2AB59 869 aa45.45■■■■■ 4.87
Snf8-202ENSMUST00000107700 Setbp1Q9Z180 1582 aa45.45■■■■■ 4.87
Snf8-202ENSMUST00000107700 Adamts12Q811B3 1600 aa45.36■■■■■ 4.85
Snf8-202ENSMUST00000107700 Gm14025A2AP89 1413 aa45.35■■■■■ 4.85
Snf8-202ENSMUST00000107700 EprsQ8CGC7 1512 aaKnown RBP45.31■■■■■ 4.84
Snf8-202ENSMUST00000107700 Eif4g1Q6NZJ6 1600 aaKnown RBP45.23■■■■■ 4.83
Snf8-202ENSMUST00000107700 Mroh2bQ7M6Y6 1581 aa45.22■■■■■ 4.83
Snf8-202ENSMUST00000107700 Ak9G3UYQ4 1894 aa45.21■■■■■ 4.83
Snf8-202ENSMUST00000107700 AI481877A2ALV5 1481 aa45.21■■■■■ 4.83
Snf8-202ENSMUST00000107700 Arhgef12Q8R4H2 1543 aaKnown RBP45.16■■■■■ 4.82
Snf8-202ENSMUST00000107700 Slx4Q6P1D7 1565 aa45.16■■■■■ 4.82
Snf8-202ENSMUST00000107700 Ppp1r18Q8BQ30 594 aa45.14■■■■■ 4.82
Snf8-202ENSMUST00000107700 Npm2Q80W85 207 aa44.99■■■■■ 4.79
Snf8-202ENSMUST00000107700 Rpap1Q80TE0 1409 aa44.98■■■■■ 4.79
Snf8-202ENSMUST00000107700 Ifnlr1Q8CGK5 535 aa44.95■■■■■ 4.79
Snf8-202ENSMUST00000107700 Jph4Q80WT0 628 aa44.9■■■■■ 4.78
Snf8-202ENSMUST00000107700 Carmil1Q6EDY6 1374 aa44.89■■■■■ 4.78
Snf8-202ENSMUST00000107700 Gm7298A0A0N4SVU1 1476 aa44.87■■■■■ 4.77
Snf8-202ENSMUST00000107700 Map3k1P53349 1493 aa44.83■■■■■ 4.77
Snf8-202ENSMUST00000107700 Clasp1Q80TV8 1535 aaKnown RBP44.8■■■■■ 4.76
Snf8-202ENSMUST00000107700 Abca5Q8K448 1642 aa44.77■■■■■ 4.76
Snf8-202ENSMUST00000107700 Ttc37F8VPK0 1563 aa44.73■■■■■ 4.75
Snf8-202ENSMUST00000107700 Fkbp15Q6P9Q6 1216 aaKnown RBP44.71■■■■■ 4.75
Snf8-202ENSMUST00000107700 AdgbG3UZ78 1657 aa44.7■■■■■ 4.75
Snf8-202ENSMUST00000107700 Arhgap35Q91YM2 1499 aa44.66■■■■■ 4.74
Snf8-202ENSMUST00000107700 Mapkbp1Q6NS57 1503 aa44.65■■■■■ 4.74
Snf8-202ENSMUST00000107700 Lrrc9Q8CDN9 1456 aa44.6■■■■■ 4.73
Snf8-202ENSMUST00000107700 Polr1aO35134 1717 aaKnown RBP44.6■■■■■ 4.73
Snf8-202ENSMUST00000107700 WrnO09053 1401 aa44.59■■■■■ 4.73
Snf8-202ENSMUST00000107700 Arid3cA6PWV5 409 aa44.58■■■■■ 4.73
Snf8-202ENSMUST00000107700 Rrbp1Q99PL5 1605 aaKnown RBP44.57■■■■■ 4.72
Snf8-202ENSMUST00000107700 Depdc5P61460 1591 aa44.53■■■■■ 4.72
Snf8-202ENSMUST00000107700 Kdm5bQ80Y84 1544 aa44.53■■■■■ 4.72
Snf8-202ENSMUST00000107700 Igf1rQ60751 1373 aa44.5■■■■■ 4.71
Snf8-202ENSMUST00000107700 Znf608Q56A10 1511 aa44.5■■■■■ 4.71
Snf8-202ENSMUST00000107700 Plekhg3Q4VAC9 1341 aa44.5■■■■■ 4.71
Snf8-202ENSMUST00000107700 Cux1P53564 1515 aa44.44■■■■■ 4.7
Snf8-202ENSMUST00000107700 Arhgef11Q68FM7 1552 aa44.41■■■■■ 4.7
Snf8-202ENSMUST00000107700 Zfyve16Q80U44 1528 aa44.38■■■■■ 4.69
Snf8-202ENSMUST00000107700 Wdr7Q920I9 1489 aa44.35■■■■■ 4.69
Snf8-202ENSMUST00000107700 Gab3Q8BSM5 595 aa44.31■■■■■ 4.68
Snf8-202ENSMUST00000107700 Cul7Q8VE73 1689 aa44.27■■■■■ 4.68
Snf8-202ENSMUST00000107700 NhsB1AV60 1647 aa44.27■■■■■ 4.68
Snf8-202ENSMUST00000107700 Clip1Q922J3 1391 aa44.27■■■■■ 4.68
Snf8-202ENSMUST00000107700 Fndc1E9Q043 1732 aa44.25■■■■■ 4.67
Snf8-202ENSMUST00000107700 Alpk3Q924C5 1678 aa44.23■■■■■ 4.67
Snf8-202ENSMUST00000107700 Arhgap31A6X8Z5 1425 aa44.2■■■■■ 4.67
Snf8-202ENSMUST00000107700 Fyco1Q8VDC1 1437 aa44.19■■■■■ 4.66
Snf8-202ENSMUST00000107700 Ccdc141E9Q8Q6 1531 aa44.14■■■■■ 4.66
Snf8-202ENSMUST00000107700 Plppr3Q7TPB0 716 aa44.1■■■■■ 4.65
Snf8-202ENSMUST00000107700 Atp10dQ8K2X1 1416 aa44.09■■■■■ 4.65
Snf8-202ENSMUST00000107700 Cep162Q6ZQ06 1403 aa44.08■■■■■ 4.65
Snf8-202ENSMUST00000107700 Dnajc5gQ8C632 165 aa44.05■■■■■ 4.64
Snf8-202ENSMUST00000107700 AglF8VPN4 1532 aa44.03■■■■■ 4.64
Snf8-202ENSMUST00000107700 Mroh2aD3Z750 1679 aa43.97■■■■■ 4.63
Snf8-202ENSMUST00000107700 Gcc2Q8CHG3 1679 aa43.94■■■■■ 4.63
Snf8-202ENSMUST00000107700 Myt1lP97500 1187 aa43.93■■■■■ 4.62
Snf8-202ENSMUST00000107700 Ankrd26Q811D2 1581 aa43.84■■■■■ 4.61
Snf8-202ENSMUST00000107700 Kiaa1210E9Q0C6 1637 aa43.81■■■■■ 4.6
Snf8-202ENSMUST00000107700 Abca8bQ8K440 1620 aa43.8■■■■■ 4.6
Snf8-202ENSMUST00000107700 Rapgef6Q5NCJ1 1609 aa43.79■■■■■ 4.6
Snf8-202ENSMUST00000107700 Fancd2Q80V62 1450 aa43.77■■■■■ 4.6
Snf8-202ENSMUST00000107700 BlmO88700 1416 aa43.75■■■■■ 4.59
Snf8-202ENSMUST00000107700 Ncoa2Q61026 1462 aa43.75■■■■■ 4.59
Snf8-202ENSMUST00000107700 Rnf17Q99MV7 1640 aa43.73■■■■■ 4.59
Snf8-202ENSMUST00000107700 A2mQ6GQT1 1474 aa43.68■■■■■ 4.58
Snf8-202ENSMUST00000107700 Aebp1Q640N1 1128 aa43.64■■■■■ 4.58
Snf8-202ENSMUST00000107700 MlecQ6ZQI3 291 aaKnown RBP43.64■■■■■ 4.58
Snf8-202ENSMUST00000107700 Arap1Q4LDD4 1452 aa43.64■■■■■ 4.58
Snf8-202ENSMUST00000107700 HrcG5E8J6 738 aa43.61■■■■■ 4.57
Snf8-202ENSMUST00000107700 Kif27Q7M6Z4 1394 aa43.61■■■■■ 4.57
Snf8-202ENSMUST00000107700 Magi1Q6RHR9 1471 aa43.57■■■■■ 4.57
Snf8-202ENSMUST00000107700 Kdm6bQ5NCY0 1641 aa43.51■■■■■ 4.56
Snf8-202ENSMUST00000107700 Prex2Q3LAC4 1598 aa43.5■■■■■ 4.55
Snf8-202ENSMUST00000107700 Mlh3A0A1Y7VMP7 1443 aa43.4■■■■■ 4.54
Snf8-202ENSMUST00000107700 Lmo7E9PYF4 1699 aaKnown RBP43.37■■■■■ 4.53
Snf8-202ENSMUST00000107700 Abca9Q8K449 1623 aa43.36■■■■■ 4.53
Snf8-202ENSMUST00000107700 Erich3F6QRE9 1637 aa43.35■■■■■ 4.53
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms