RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Rpap1Q80TE0 1409 aa15.46■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Eif4g3Q80XI3 1579 aaKnown RBP15.45■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Nup160Q9Z0W3 1402 aaKnown RBP15.45■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 EprsQ8CGC7 1512 aaKnown RBP15.43■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Eea1Q8BL66 1411 aa15.42■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Lmod2Q3UHZ5 550 aa15.42■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Fkbp15Q6P9Q6 1216 aaKnown RBP15.42■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 AknaQ80VW7 1404 aa15.42■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Eif4g1Q6NZJ6 1600 aaKnown RBP15.42■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Rusc2Q80U22 1514 aa15.41■□□□□ 0.06
Ccdc38-201ENSMUST00000092215 Cux1P53564 1515 aa15.38■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 UbtfP25976 765 aaKnown RBP15.37■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 Setd1bQ8CFT2 1985 aa15.37■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 AqrQ8CFQ3 1481 aaKnown RBP15.36■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 CadpsQ80TJ1 1355 aa15.36■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 Aebp1Q640N1 1128 aa15.34■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 PxdnQ3UQ28 1475 aa15.34■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 Gm7298A0A0N4SVU1 1476 aa15.33■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 WizO88286 1684 aaKnown RBP15.33■□□□□ 0.05
Ccdc38-201ENSMUST00000092215 Ifnlr1Q8CGK5 535 aa15.33■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 Fyco1Q8VDC1 1437 aa15.33■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 Pbrm1Q8BSQ9 1634 aaKnown RBP15.32■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 Fgd6Q69ZL1 1399 aa15.31■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 Pabpn1Q8CCS6 302 aaKnown RBP15.31■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 WrnO09053 1401 aa15.3■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 Polr1aO35134 1717 aaKnown RBP15.3■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 TchhA0A0B4J1F9 1599 aa15.3■□□□□ 0.04
Ccdc38-201ENSMUST00000092215 Arap1Q4LDD4 1452 aa15.26■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 Ankrd26Q811D2 1581 aa15.26■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 BlmO88700 1416 aa15.26■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 Neo1P97798 1493 aa15.23■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 Adamts12Q811B3 1600 aa15.23■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 Kif27Q7M6Z4 1394 aa15.22■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 Soga1E1U8D0 1418 aa15.21■□□□□ 0.03
Ccdc38-201ENSMUST00000092215 Abca16E9PWJ7 1678 aa15.21■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 Jph4Q80WT0 628 aa15.2■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 Gpatch8A2A6A1 1505 aa15.17■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 Abcc2Q8VI47 1543 aa15.16■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 Pcf11G3X9Z4 1553 aa15.16■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 Shroom2A2ALU4 1481 aa15.15■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 CntlnA2AM05 1397 aa15.15■□□□□ 0.02
Ccdc38-201ENSMUST00000092215 Arhgef5E9Q7D5 1581 aa15.14■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 Gm14025A2AP89 1413 aa15.12■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 Abca5Q8K448 1642 aa15.12■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 Naip1Q9QWK5 1403 aa15.11■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 Arhgap31A6X8Z5 1425 aa15.11■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 Abcc1O35379 1528 aa15.1■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 Erich3F6QRE9 1637 aa15.09■□□□□ 0.01
Ccdc38-201ENSMUST00000092215 BC005561E9Q5E2 1589 aa15.07■□□□□ 0
Ccdc38-201ENSMUST00000092215 Slx4Q6P1D7 1565 aa15.07■□□□□ 0
Ccdc38-201ENSMUST00000092215 Dnmt1P13864 1620 aaKnown RBP15.06■□□□□ 0
Ccdc38-201ENSMUST00000092215 Ythdc2B2RR83 1445 aaKnown RBP15.06■□□□□ 0
Ccdc38-201ENSMUST00000092215 Lmo7E9PYF4 1699 aaKnown RBP15.06■□□□□ 0
Ccdc38-201ENSMUST00000092215 Arid3cA6PWV5 409 aa15.05■□□□□ 0
Ccdc38-201ENSMUST00000092215 Fam50aQ9WV03 339 aaKnown RBP15.05■□□□□ 0
Ccdc38-201ENSMUST00000092215 Map3k4O08648 1597 aa15.05■□□□□ -0
Ccdc38-201ENSMUST00000092215 Tiam1Q60610 1591 aa15.04■□□□□ -0
Ccdc38-201ENSMUST00000092215 Ttbk1Q6PCN3 1308 aa15.03■□□□□ -0
Ccdc38-201ENSMUST00000092215 Gapvd1Q6PAR5 1458 aa15.02□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Arhgef12Q8R4H2 1543 aaKnown RBP15.01□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Ccdc141E9Q8Q6 1531 aa15□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Gm156Q58A37 223 aa14.99□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Mier1Q5UAK0 511 aa14.98□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Gm1043A0A140LJC2 1431 aa14.97□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Ccnb3Q810T2 1396 aa14.96□□□□□ -0.01
Ccdc38-201ENSMUST00000092215 Ncoa3O09000 1398 aa14.96□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Ncoa2Q61026 1462 aa14.95□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Rapgef6Q5NCJ1 1609 aa14.95□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Ube2uB1AUC4 352 aa14.94□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Chic2Q9D9G3 165 aa14.94□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Mug1P28665 1476 aa14.94□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 PtprtQ99M80 1454 aa14.93□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Magi1Q6RHR9 1471 aa14.91□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Chd1P40201 1711 aa14.91□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 NexmifQ5DTT1 1515 aa14.9□□□□□ -0.02
Ccdc38-201ENSMUST00000092215 Cep170Q6A065 1588 aa14.89□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Ppp1r18Q8BQ30 594 aa14.89□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Dhx57Q6P5D3 1388 aaKnown RBP14.88□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Fam163aQ8CAA5 168 aa14.88□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Prex2Q3LAC4 1598 aa14.86□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Acin1Q9JIX8 1338 aaKnown RBP14.86□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Zcchc11B2RX14 1644 aaKnown RBP14.85□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Rrbp1Q99PL5 1605 aaKnown RBP14.85□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Adgrl3Q80TS3 1537 aa14.84□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Mroh2aD3Z750 1679 aa14.84□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Arhgef11Q68FM7 1552 aa14.84□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Igf1rQ60751 1373 aa14.84□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Peg3Q3URU2 1571 aa14.83□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Tdrd9Q14BI7 1383 aa14.83□□□□□ -0.03
Ccdc38-201ENSMUST00000092215 Fancd2Q80V62 1450 aa14.83□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Atp10dQ8K2X1 1416 aa14.83□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Znf608Q56A10 1511 aa14.83□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Zbtb7cQ8VCZ7 619 aa14.82□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Col17a1Q07563 1470 aa14.81□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Kdm5bQ80Y84 1544 aa14.81□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Cabp1Q9JLK7 227 aa14.79□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 AI481877A2ALV5 1481 aa14.79□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 3425401B19RikD3Z1D3 1412 aa14.78□□□□□ -0.04
Ccdc38-201ENSMUST00000092215 Cdk11bP24788 784 aaKnown RBP14.76□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Plppr3Q7TPB0 716 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms