RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Rapgef2Q8CHG7 1496 aa40.46■■■■■ 4.07
Cpsf4-201ENSMUST00000070487 Carmil1Q6EDY6 1374 aa40.34■■■■■ 4.05
Cpsf4-201ENSMUST00000070487 Arhgap35Q91YM2 1499 aa40.33■■■■■ 4.05
Cpsf4-201ENSMUST00000070487 EprsQ8CGC7 1512 aaKnown RBP40.32■■■■■ 4.04
Cpsf4-201ENSMUST00000070487 Map3k1P53349 1493 aa40.31■■■■■ 4.04
Cpsf4-201ENSMUST00000070487 Zcchc11B2RX14 1644 aaKnown RBP40.25■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 AknaQ80VW7 1404 aa40.24■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 TchhA0A0B4J1F9 1599 aa40.23■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 Adamts12Q811B3 1600 aa40.23■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 Arhgap27A2AB59 869 aa40.2■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 Cep162Q6ZQ06 1403 aa40.2■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 WizO88286 1684 aaKnown RBP40.19■■■■■ 4.03
Cpsf4-201ENSMUST00000070487 CadpsQ80TJ1 1355 aa40.18■■■■■ 4.02
Cpsf4-201ENSMUST00000070487 Abca16E9PWJ7 1678 aa40.16■■■■■ 4.02
Cpsf4-201ENSMUST00000070487 PxdnQ3UQ28 1475 aa40.14■■■■■ 4.02
Cpsf4-201ENSMUST00000070487 Abcc2Q8VI47 1543 aa40.13■■■■■ 4.02
Cpsf4-201ENSMUST00000070487 Eif4g1Q6NZJ6 1600 aaKnown RBP40.13■■■■■ 4.01
Cpsf4-201ENSMUST00000070487 Abcc1O35379 1528 aa40.11■■■■■ 4.01
Cpsf4-201ENSMUST00000070487 Dnmt1P13864 1620 aaKnown RBP40.11■■■■■ 4.01
Cpsf4-201ENSMUST00000070487 Clip1Q922J3 1391 aa40.07■■■■■ 4.01
Cpsf4-201ENSMUST00000070487 Gapvd1Q6PAR5 1458 aa40.06■■■■■ 4
Cpsf4-201ENSMUST00000070487 Polr1aO35134 1717 aaKnown RBP40.04■■■■■ 4
Cpsf4-201ENSMUST00000070487 Map3k4O08648 1597 aa40.03■■■■■ 4
Cpsf4-201ENSMUST00000070487 Gm7298A0A0N4SVU1 1476 aa39.98■■■■□ 3.99
Cpsf4-201ENSMUST00000070487 Rpap1Q80TE0 1409 aa39.98■■■■□ 3.99
Cpsf4-201ENSMUST00000070487 Neo1P97798 1493 aa39.97■■■■□ 3.99
Cpsf4-201ENSMUST00000070487 Cep170Q6A065 1588 aa39.96■■■■□ 3.99
Cpsf4-201ENSMUST00000070487 Soga1E1U8D0 1418 aa39.95■■■■□ 3.99
Cpsf4-201ENSMUST00000070487 Myt1lP97500 1187 aa39.94■■■■□ 3.99
Cpsf4-201ENSMUST00000070487 Adgrl3Q80TS3 1537 aa39.91■■■■□ 3.98
Cpsf4-201ENSMUST00000070487 Ythdc2B2RR83 1445 aaKnown RBP39.91■■■■□ 3.98
Cpsf4-201ENSMUST00000070487 Gm156Q58A37 223 aa39.91■■■■□ 3.98
Cpsf4-201ENSMUST00000070487 Chd1P40201 1711 aa39.88■■■■□ 3.97
Cpsf4-201ENSMUST00000070487 BC005561E9Q5E2 1589 aa39.88■■■■□ 3.97
Cpsf4-201ENSMUST00000070487 Gm14025A2AP89 1413 aa39.87■■■■□ 3.97
Cpsf4-201ENSMUST00000070487 Slx4Q6P1D7 1565 aa39.85■■■■□ 3.97
Cpsf4-201ENSMUST00000070487 Cux1P53564 1515 aa39.8■■■■□ 3.96
Cpsf4-201ENSMUST00000070487 Abca5Q8K448 1642 aa39.79■■■■□ 3.96
Cpsf4-201ENSMUST00000070487 Fyco1Q8VDC1 1437 aa39.77■■■■□ 3.96
Cpsf4-201ENSMUST00000070487 Jph4Q80WT0 628 aa39.75■■■■□ 3.95
Cpsf4-201ENSMUST00000070487 PtprtQ99M80 1454 aa39.74■■■■□ 3.95
Cpsf4-201ENSMUST00000070487 WrnO09053 1401 aa39.66■■■■□ 3.94
Cpsf4-201ENSMUST00000070487 Arhgef12Q8R4H2 1543 aaKnown RBP39.62■■■■□ 3.93
Cpsf4-201ENSMUST00000070487 Arhgef5E9Q7D5 1581 aa39.55■■■■□ 3.92
Cpsf4-201ENSMUST00000070487 Ttbk1Q6PCN3 1308 aa39.52■■■■□ 3.92
Cpsf4-201ENSMUST00000070487 Ankrd26Q811D2 1581 aa39.5■■■■□ 3.91
Cpsf4-201ENSMUST00000070487 AI481877A2ALV5 1481 aa39.48■■■■□ 3.91
Cpsf4-201ENSMUST00000070487 Rrbp1Q99PL5 1605 aaKnown RBP39.42■■■■□ 3.9
Cpsf4-201ENSMUST00000070487 Setd5Q5XJV7 1441 aa39.39■■■■□ 3.9
Cpsf4-201ENSMUST00000070487 Fkbp15Q6P9Q6 1216 aaKnown RBP39.39■■■■□ 3.9
Cpsf4-201ENSMUST00000070487 Aebp1Q640N1 1128 aa39.38■■■■□ 3.89
Cpsf4-201ENSMUST00000070487 Setbp1Q9Z180 1582 aa39.36■■■■□ 3.89
Cpsf4-201ENSMUST00000070487 Igf1rQ60751 1373 aa39.34■■■■□ 3.89
Cpsf4-201ENSMUST00000070487 Pprc1Q6NZN1 1644 aa39.34■■■■□ 3.89
Cpsf4-201ENSMUST00000070487 Eea1Q8BL66 1411 aa39.32■■■■□ 3.89
Cpsf4-201ENSMUST00000070487 Arhgap31A6X8Z5 1425 aa39.3■■■■□ 3.88
Cpsf4-201ENSMUST00000070487 Kdm5bQ80Y84 1544 aa39.29■■■■□ 3.88
Cpsf4-201ENSMUST00000070487 Erich3F6QRE9 1637 aa39.23■■■■□ 3.87
Cpsf4-201ENSMUST00000070487 Ifnlr1Q8CGK5 535 aa39.23■■■■□ 3.87
Cpsf4-201ENSMUST00000070487 Ccdc141E9Q8Q6 1531 aa39.19■■■■□ 3.86
Cpsf4-201ENSMUST00000070487 Kif27Q7M6Z4 1394 aa39.17■■■■□ 3.86
Cpsf4-201ENSMUST00000070487 BlmO88700 1416 aa39.17■■■■□ 3.86
Cpsf4-201ENSMUST00000070487 Ak9G3UYQ4 1894 aa39.15■■■■□ 3.86
Cpsf4-201ENSMUST00000070487 Lmo7E9PYF4 1699 aaKnown RBP39.13■■■■□ 3.85
Cpsf4-201ENSMUST00000070487 Ppp1r18Q8BQ30 594 aa39.1■■■■□ 3.85
Cpsf4-201ENSMUST00000070487 Ap3b1Q9Z1T1 1105 aa39.1■■■■□ 3.85
Cpsf4-201ENSMUST00000070487 Ncoa2Q61026 1462 aa39.09■■■■□ 3.85
Cpsf4-201ENSMUST00000070487 Rapgef6Q5NCJ1 1609 aa39.07■■■■□ 3.85
Cpsf4-201ENSMUST00000070487 Pcdh10E9PXQ7 1057 aa39.07■■■■□ 3.84
Cpsf4-201ENSMUST00000070487 Lrrc9Q8CDN9 1456 aa39.04■■■■□ 3.84
Cpsf4-201ENSMUST00000070487 Pcf11G3X9Z4 1553 aa39.02■■■■□ 3.84
Cpsf4-201ENSMUST00000070487 NhsB1AV60 1647 aa39.01■■■■□ 3.83
Cpsf4-201ENSMUST00000070487 Wdr7Q920I9 1489 aa38.99■■■■□ 3.83
Cpsf4-201ENSMUST00000070487 Arid3cA6PWV5 409 aa38.99■■■■□ 3.83
Cpsf4-201ENSMUST00000070487 Arap1Q4LDD4 1452 aa38.96■■■■□ 3.83
Cpsf4-201ENSMUST00000070487 CntlnA2AM05 1397 aa38.95■■■■□ 3.83
Cpsf4-201ENSMUST00000070487 Mroh2aD3Z750 1679 aa38.94■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Clasp1Q80TV8 1535 aaKnown RBP38.94■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Cul7Q8VE73 1689 aa38.92■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Znf608Q56A10 1511 aa38.91■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Fancd2Q80V62 1450 aa38.9■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Atp10dQ8K2X1 1416 aa38.89■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Magi1Q6RHR9 1471 aa38.88■■■■□ 3.82
Cpsf4-201ENSMUST00000070487 Gcc2Q8CHG3 1679 aa38.87■■■■□ 3.81
Cpsf4-201ENSMUST00000070487 Arhgef11Q68FM7 1552 aa38.83■■■■□ 3.81
Cpsf4-201ENSMUST00000070487 Kiaa1210E9Q0C6 1637 aa38.83■■■■□ 3.81
Cpsf4-201ENSMUST00000070487 Fam163aQ8CAA5 168 aa38.83■■■■□ 3.81
Cpsf4-201ENSMUST00000070487 Ncoa3O09000 1398 aa38.78■■■■□ 3.8
Cpsf4-201ENSMUST00000070487 Dhx57Q6P5D3 1388 aaKnown RBP38.76■■■■□ 3.79
Cpsf4-201ENSMUST00000070487 Ttc37F8VPK0 1563 aa38.75■■■■□ 3.79
Cpsf4-201ENSMUST00000070487 Mug1P28665 1476 aa38.73■■■■□ 3.79
Cpsf4-201ENSMUST00000070487 Abca8bQ8K440 1620 aa38.68■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Zfyve16Q80U44 1528 aa38.66■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Naip1Q9QWK5 1403 aa38.65■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Prex2Q3LAC4 1598 aa38.64■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Gm1043A0A140LJC2 1431 aa38.64■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Mapkbp1Q6NS57 1503 aa38.64■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Depdc5P61460 1591 aa38.64■■■■□ 3.78
Cpsf4-201ENSMUST00000070487 Lmod2Q3UHZ5 550 aa38.63■■■■□ 3.77
Cpsf4-201ENSMUST00000070487 Peg3Q3URU2 1571 aa38.62■■■■□ 3.77
Retrieved 100 of 22,080 RNA–protein pairs in 7.2 ms