RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 AqrQ8CFQ3 1481 aaKnown RBP19.01■□□□□ 0.63
Ldb3-204ENSMUST00000064098 EprsQ8CGC7 1512 aaKnown RBP18.95■□□□□ 0.62
Ldb3-204ENSMUST00000064098 Gpatch8A2A6A1 1505 aa18.94■□□□□ 0.62
Ldb3-204ENSMUST00000064098 Cux1P53564 1515 aa18.86■□□□□ 0.61
Ldb3-204ENSMUST00000064098 Adamts12Q811B3 1600 aa18.86■□□□□ 0.61
Ldb3-204ENSMUST00000064098 CadpsQ80TJ1 1355 aa18.85■□□□□ 0.61
Ldb3-204ENSMUST00000064098 WizO88286 1684 aaKnown RBP18.85■□□□□ 0.61
Ldb3-204ENSMUST00000064098 Polr1aO35134 1717 aaKnown RBP18.85■□□□□ 0.61
Ldb3-204ENSMUST00000064098 Rpap1Q80TE0 1409 aa18.84■□□□□ 0.61
Ldb3-204ENSMUST00000064098 PxdnQ3UQ28 1475 aa18.84■□□□□ 0.61
Ldb3-204ENSMUST00000064098 TchhA0A0B4J1F9 1599 aa18.81■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Arhgap27A2AB59 869 aa18.81■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Gm7298A0A0N4SVU1 1476 aa18.81■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Ehmt2Q9Z148 1263 aaKnown RBP18.8■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Setd5Q5XJV7 1441 aa18.8■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Fyco1Q8VDC1 1437 aa18.8■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Fgd6Q69ZL1 1399 aa18.8■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Eea1Q8BL66 1411 aa18.79■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Abca16E9PWJ7 1678 aa18.79■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Ankrd26Q811D2 1581 aa18.79■□□□□ 0.6
Ldb3-204ENSMUST00000064098 Abcc2Q8VI47 1543 aa18.77■□□□□ 0.59
Ldb3-204ENSMUST00000064098 Soga1E1U8D0 1418 aa18.75■□□□□ 0.59
Ldb3-204ENSMUST00000064098 Ap3b1Q9Z1T1 1105 aa18.71■□□□□ 0.59
Ldb3-204ENSMUST00000064098 Shroom2A2ALU4 1481 aa18.71■□□□□ 0.59
Ldb3-204ENSMUST00000064098 Abca5Q8K448 1642 aa18.7■□□□□ 0.58
Ldb3-204ENSMUST00000064098 AknaQ80VW7 1404 aa18.69■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Pabpn1Q8CCS6 302 aaKnown RBP18.69■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Arap1Q4LDD4 1452 aa18.69■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Aebp1Q640N1 1128 aa18.68■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Erich3F6QRE9 1637 aa18.68■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Dnmt1P13864 1620 aaKnown RBP18.68■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Pelp1Q9DBD5 1123 aaKnown RBP18.66■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Map3k4O08648 1597 aa18.66■□□□□ 0.58
Ldb3-204ENSMUST00000064098 WrnO09053 1401 aa18.65■□□□□ 0.58
Ldb3-204ENSMUST00000064098 Neo1P97798 1493 aa18.63■□□□□ 0.57
Ldb3-204ENSMUST00000064098 Slx4Q6P1D7 1565 aa18.62■□□□□ 0.57
Ldb3-204ENSMUST00000064098 Lmo7E9PYF4 1699 aaKnown RBP18.62■□□□□ 0.57
Ldb3-204ENSMUST00000064098 BC005561E9Q5E2 1589 aa18.61■□□□□ 0.57
Ldb3-204ENSMUST00000064098 Pcf11G3X9Z4 1553 aa18.6■□□□□ 0.57
Ldb3-204ENSMUST00000064098 Arhgef5E9Q7D5 1581 aa18.59■□□□□ 0.57
Ldb3-204ENSMUST00000064098 Abcc1O35379 1528 aa18.58■□□□□ 0.56
Ldb3-204ENSMUST00000064098 BlmO88700 1416 aa18.56■□□□□ 0.56
Ldb3-204ENSMUST00000064098 Jph4Q80WT0 628 aa18.56■□□□□ 0.56
Ldb3-204ENSMUST00000064098 CntlnA2AM05 1397 aa18.54■□□□□ 0.56
Ldb3-204ENSMUST00000064098 Plekhg3Q4VAC9 1341 aa18.53■□□□□ 0.56
Ldb3-204ENSMUST00000064098 Gm14025A2AP89 1413 aa18.53■□□□□ 0.56
Ldb3-204ENSMUST00000064098 Kif27Q7M6Z4 1394 aa18.52■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Naip1Q9QWK5 1403 aa18.51■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Arhgef12Q8R4H2 1543 aaKnown RBP18.5■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Chd1P40201 1711 aa18.48■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Tiam1Q60610 1591 aa18.47■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Arhgap31A6X8Z5 1425 aa18.46■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Ythdc2B2RR83 1445 aaKnown RBP18.46■□□□□ 0.55
Ldb3-204ENSMUST00000064098 Zcchc11B2RX14 1644 aaKnown RBP18.46■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Gapvd1Q6PAR5 1458 aa18.45■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Lmod2Q3UHZ5 550 aa18.45■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Fkbp15Q6P9Q6 1216 aaKnown RBP18.45■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Acin1Q9JIX8 1338 aaKnown RBP18.41■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Gm1043A0A140LJC2 1431 aa18.41■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Rapgef6Q5NCJ1 1609 aa18.4■□□□□ 0.54
Ldb3-204ENSMUST00000064098 PtprtQ99M80 1454 aa18.39■□□□□ 0.54
Ldb3-204ENSMUST00000064098 Rrbp1Q99PL5 1605 aaKnown RBP18.39■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Peg3Q3URU2 1571 aa18.38■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Col17a1Q07563 1470 aa18.38■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Ccdc141E9Q8Q6 1531 aa18.37■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Cep170Q6A065 1588 aa18.37■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Gm156Q58A37 223 aa18.35■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Ncoa3O09000 1398 aa18.34■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Ncoa2Q61026 1462 aa18.34■□□□□ 0.53
Ldb3-204ENSMUST00000064098 Kdm5bQ80Y84 1544 aa18.32■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Mug1P28665 1476 aa18.31■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Mroh2aD3Z750 1679 aa18.31■□□□□ 0.52
Ldb3-204ENSMUST00000064098 UbtfP25976 765 aaKnown RBP18.3■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Arhgef11Q68FM7 1552 aa18.3■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Magi1Q6RHR9 1471 aa18.29■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Rpgrip1Q9EPQ2 1331 aa18.28■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Fam163aQ8CAA5 168 aa18.28■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Adgrl3Q80TS3 1537 aa18.27■□□□□ 0.52
Ldb3-204ENSMUST00000064098 Igf1rQ60751 1373 aa18.27■□□□□ 0.51
Ldb3-204ENSMUST00000064098 Ifnlr1Q8CGK5 535 aa18.26■□□□□ 0.51
Ldb3-204ENSMUST00000064098 AI481877A2ALV5 1481 aa18.25■□□□□ 0.51
Ldb3-204ENSMUST00000064098 Fancd2Q80V62 1450 aa18.23■□□□□ 0.51
Ldb3-204ENSMUST00000064098 NexmifQ5DTT1 1515 aa18.23■□□□□ 0.51
Ldb3-204ENSMUST00000064098 Dhx57Q6P5D3 1388 aaKnown RBP18.23■□□□□ 0.51
Ldb3-204ENSMUST00000064098 Kiaa1551Q5DTW7 1521 aa18.22■□□□□ 0.51
Ldb3-204ENSMUST00000064098 Dnajc5P60904 198 aa18.2■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Lmtk2Q3TYD6 1471 aa18.2■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Ccnb3Q810T2 1396 aa18.2■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Prex2Q3LAC4 1598 aa18.2■□□□□ 0.5
Ldb3-204ENSMUST00000064098 NhsB1AV60 1647 aa18.2■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Gcc2Q8CHG3 1679 aa18.19■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Cul7Q8VE73 1689 aa18.19■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Mapkbp1Q6NS57 1503 aa18.19■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Cdc42bpaQ3UU96 1719 aa18.18■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Znf608Q56A10 1511 aa18.16■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Atp10dQ8K2X1 1416 aa18.15■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Lrrc9Q8CDN9 1456 aa18.15■□□□□ 0.5
Ldb3-204ENSMUST00000064098 Wdr7Q920I9 1489 aa18.14■□□□□ 0.49
Ldb3-204ENSMUST00000064098 Arid3cA6PWV5 409 aa18.14■□□□□ 0.49
Ldb3-204ENSMUST00000064098 Setbp1Q9Z180 1582 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 123 ms