RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 Setd5Q5XJV7 1441 aa30.56■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Grin2aP35436 1464 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Setd1bQ8CFT2 1985 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Ankrd26Q811D2 1581 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Cux1P53564 1515 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Ift140E9PY46 1464 aa30.53■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Arap1Q4LDD4 1452 aa30.53■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Ap3b1Q9Z1T1 1105 aa30.53■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Mier1Q5UAK0 511 aa30.48■■■□□ 2.47
Ldb1-202ENSMUST00000056931 Plekhg3Q4VAC9 1341 aa30.43■■■□□ 2.46
Ldb1-202ENSMUST00000056931 Erich3F6QRE9 1637 aa30.43■■■□□ 2.46
Ldb1-202ENSMUST00000056931 EprsQ8CGC7 1512 aaKnown RBP30.41■■■□□ 2.46
Ldb1-202ENSMUST00000056931 Nup160Q9Z0W3 1402 aaKnown RBP30.4■■■□□ 2.46
Ldb1-202ENSMUST00000056931 Arhgef5E9Q7D5 1581 aa30.37■■■□□ 2.45
Ldb1-202ENSMUST00000056931 Polr1aO35134 1717 aaKnown RBP30.36■■■□□ 2.45
Ldb1-202ENSMUST00000056931 Pbrm1Q8BSQ9 1634 aaKnown RBP30.35■■■□□ 2.45
Ldb1-202ENSMUST00000056931 Fyco1Q8VDC1 1437 aa30.32■■■□□ 2.44
Ldb1-202ENSMUST00000056931 Pcf11G3X9Z4 1553 aa30.32■■■□□ 2.44
Ldb1-202ENSMUST00000056931 UbtfP25976 765 aaKnown RBP30.31■■■□□ 2.44
Ldb1-202ENSMUST00000056931 WizO88286 1684 aaKnown RBP30.3■■■□□ 2.44
Ldb1-202ENSMUST00000056931 Lmo7E9PYF4 1699 aaKnown RBP30.29■■■□□ 2.44
Ldb1-202ENSMUST00000056931 Eif4g3Q80XI3 1579 aaKnown RBP30.27■■■□□ 2.44
Ldb1-202ENSMUST00000056931 CadpsQ80TJ1 1355 aa30.26■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Adamts12Q811B3 1600 aa30.25■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Rpap1Q80TE0 1409 aa30.23■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Gpatch8A2A6A1 1505 aa30.23■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Neurod1Q60867 357 aa30.22■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Cc2d2bA0A286YDU8 1405 aa30.21■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Gm7298A0A0N4SVU1 1476 aa30.21■■■□□ 2.43
Ldb1-202ENSMUST00000056931 PxdnQ3UQ28 1475 aa30.21■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Rusc2Q80U22 1514 aa30.2■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Tiam1Q60610 1591 aa30.18■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Abca16E9PWJ7 1678 aa30.17■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Abca5Q8K448 1642 aa30.16■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Naip1Q9QWK5 1403 aa30.16■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Aebp1Q640N1 1128 aa30.15■■■□□ 2.42
Ldb1-202ENSMUST00000056931 TchhA0A0B4J1F9 1599 aa30.15■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Slx4Q6P1D7 1565 aa30.14■■■□□ 2.42
Ldb1-202ENSMUST00000056931 BlmO88700 1416 aa30.06■■■□□ 2.4
Ldb1-202ENSMUST00000056931 CntlnA2AM05 1397 aa30.06■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Soga1E1U8D0 1418 aa30.06■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Sall2Q9QX96 1004 aa30.04■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Arhgap27A2AB59 869 aa30.03■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Lmod2Q3UHZ5 550 aa30.03■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Abcc2Q8VI47 1543 aa30.03■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Peg3Q3URU2 1571 aa29.93■■■□□ 2.38
Ldb1-202ENSMUST00000056931 WrnO09053 1401 aa29.92■■■□□ 2.38
Ldb1-202ENSMUST00000056931 Gm1043A0A140LJC2 1431 aa29.89■■■□□ 2.38
Ldb1-202ENSMUST00000056931 Las1lA2BE28 776 aaKnown RBP29.88■■■□□ 2.37
Ldb1-202ENSMUST00000056931 Shroom2A2ALU4 1481 aa29.87■■■□□ 2.37
Ldb1-202ENSMUST00000056931 Kif27Q7M6Z4 1394 aa29.86■■■□□ 2.37
Ldb1-202ENSMUST00000056931 Dnmt1P13864 1620 aaKnown RBP29.79■■■□□ 2.36
Ldb1-202ENSMUST00000056931 Ncapd3Q6ZQK0 1506 aa29.79■■■□□ 2.36
Ldb1-202ENSMUST00000056931 BC005561E9Q5E2 1589 aa29.78■■■□□ 2.36
Ldb1-202ENSMUST00000056931 Map3k4O08648 1597 aa29.78■■■□□ 2.36
Ldb1-202ENSMUST00000056931 Fgd6Q69ZL1 1399 aa29.74■■■□□ 2.35
Ldb1-202ENSMUST00000056931 AknaQ80VW7 1404 aa29.73■■■□□ 2.35
Ldb1-202ENSMUST00000056931 Neo1P97798 1493 aa29.72■■■□□ 2.35
Ldb1-202ENSMUST00000056931 Rapgef6Q5NCJ1 1609 aa29.66■■■□□ 2.34
Ldb1-202ENSMUST00000056931 Anks4bQ8K3X6 423 aa29.65■■■□□ 2.34
Ldb1-202ENSMUST00000056931 Zcchc11B2RX14 1644 aaKnown RBP29.65■■■□□ 2.34
Ldb1-202ENSMUST00000056931 3425401B19RikD3Z1D3 1412 aa29.62■■■□□ 2.33
Ldb1-202ENSMUST00000056931 Arhgap31A6X8Z5 1425 aa29.61■■■□□ 2.33
Ldb1-202ENSMUST00000056931 NexmifQ5DTT1 1515 aa29.58■■■□□ 2.33
Ldb1-202ENSMUST00000056931 Ncoa3O09000 1398 aa29.58■■■□□ 2.33
Ldb1-202ENSMUST00000056931 Aebp2Q9Z248 504 aaKnown RBP29.56■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Ccnb3Q810T2 1396 aa29.56■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Wdr66E9Q743 1299 aa29.56■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Jph4Q80WT0 628 aa29.55■■■□□ 2.32
Ldb1-202ENSMUST00000056931 ClspnQ80YR7 1315 aa29.55■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Lmtk2Q3TYD6 1471 aa29.55■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Mug1P28665 1476 aa29.54■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Arhgef12Q8R4H2 1543 aaKnown RBP29.54■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Arhgef11Q68FM7 1552 aa29.52■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Fkbp15Q6P9Q6 1216 aaKnown RBP29.52■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Ccdc141E9Q8Q6 1531 aa29.49■■■□□ 2.31
Ldb1-202ENSMUST00000056931 Mroh2aD3Z750 1679 aa29.48■■■□□ 2.31
Ldb1-202ENSMUST00000056931 Abcc1O35379 1528 aa29.45■■■□□ 2.31
Ldb1-202ENSMUST00000056931 Fam50aQ9WV03 339 aaKnown RBP29.44■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Gm14025A2AP89 1413 aa29.43■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Gcc2Q8CHG3 1679 aa29.42■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Ncoa2Q61026 1462 aa29.42■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Chd1P40201 1711 aa29.42■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Cdc42bpaQ3UU96 1719 aa29.41■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Rrbp1Q99PL5 1605 aaKnown RBP29.4■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Magi1Q6RHR9 1471 aa29.39■■■□□ 2.3
Ldb1-202ENSMUST00000056931 TonslQ6NZL6 1363 aa29.39■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Kdm5bQ80Y84 1544 aa29.37■■■□□ 2.29
Ldb1-202ENSMUST00000056931 A2mQ6GQT1 1474 aa29.36■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Kiaa1551Q5DTW7 1521 aa29.36■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Pelp1Q9DBD5 1123 aaKnown RBP29.35■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Prex2Q3LAC4 1598 aa29.34■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Cdk11bP24788 784 aaKnown RBP29.33■■■□□ 2.29
Ldb1-202ENSMUST00000056931 1700123L14RikQ3V2K7 440 aa29.3■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Nop58Q6DFW4 536 aaKnown RBP29.29■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Fam163aQ8CAA5 168 aa29.27■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Arhgef40Q3UPH7 1517 aa29.27■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Naip2Q9QUK4 1447 aa29.27■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Dhx57Q6P5D3 1388 aaKnown RBP29.25■■■□□ 2.27
Ldb1-202ENSMUST00000056931 Mapkbp1Q6NS57 1503 aa29.24■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 71.8 ms