RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Cdk11bP24788 784 aaKnown RBP10.59□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Lmod2Q3UHZ5 550 aa10.59□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Nop58Q6DFW4 536 aaKnown RBP10.59□□□□□ -0.71
Clrn1-202ENSMUST00000055636 ClspnQ80YR7 1315 aa10.59□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Mrc2Q64449 1479 aa10.59□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Eea1Q8BL66 1411 aa10.58□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Arap1Q4LDD4 1452 aa10.58□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Kif21aQ9QXL2 1672 aa10.58□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Efcab5A0JP43 1406 aa10.57□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Aplp2Q06335 707 aa10.57□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Samd9lQ69Z37 1561 aa10.56□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Gm38655A0A286YDK6 273 aa10.53□□□□□ -0.72
Clrn1-202ENSMUST00000055636 Map3k1P53349 1493 aa10.53□□□□□ -0.72
Clrn1-202ENSMUST00000055636 AqrQ8CFQ3 1481 aaKnown RBP10.51□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Crocc2F6XLV1 1638 aa10.51□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Cux1P53564 1515 aa10.51□□□□□ -0.73
Clrn1-202ENSMUST00000055636 CenpbP27790 599 aa10.51□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Plb1Q3TTY0 1478 aa10.51□□□□□ -0.73
Clrn1-202ENSMUST00000055636 BlmO88700 1416 aa10.5□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Ankrd26Q811D2 1581 aa10.49□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Carmil1Q6EDY6 1374 aa10.49□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Arhgef5E9Q7D5 1581 aa10.48□□□□□ -0.73
Clrn1-202ENSMUST00000055636 SynmQ70IV5 1561 aa10.47□□□□□ -0.73
Clrn1-202ENSMUST00000055636 Urb2E9Q7L1 1524 aaKnown RBP10.46□□□□□ -0.74
Clrn1-202ENSMUST00000055636 TonslQ6NZL6 1363 aa10.46□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Pcf11G3X9Z4 1553 aa10.45□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Naip1Q9QWK5 1403 aa10.44□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Aebp1Q640N1 1128 aa10.44□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Fam50aQ9WV03 339 aaKnown RBP10.43□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Slx4Q6P1D7 1565 aa10.42□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Eid3Q3V124 375 aa10.42□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Pla2r1Q62028 1487 aa10.42□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Tiam1Q60610 1591 aa10.41□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Rpap1Q80TE0 1409 aa10.4□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Magi3Q9EQJ9 1476 aa10.4□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Grin2aP35436 1464 aa10.4□□□□□ -0.74
Clrn1-202ENSMUST00000055636 Disp1Q3TDN0 1521 aa10.4□□□□□ -0.75
Clrn1-202ENSMUST00000055636 EprsQ8CGC7 1512 aaKnown RBP10.39□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Ncapd3Q6ZQK0 1506 aa10.39□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Erich3F6QRE9 1637 aa10.39□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Fyco1Q8VDC1 1437 aa10.38□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Arhgap27A2AB59 869 aa10.37□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Lmo7E9PYF4 1699 aaKnown RBP10.36□□□□□ -0.75
Clrn1-202ENSMUST00000055636 CadpsQ80TJ1 1355 aa10.36□□□□□ -0.75
Clrn1-202ENSMUST00000055636 DiexfQ8BTT6 772 aaKnown RBP10.35□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Setd1bQ8CFT2 1985 aa10.35□□□□□ -0.75
Clrn1-202ENSMUST00000055636 CntlnA2AM05 1397 aa10.35□□□□□ -0.75
Clrn1-202ENSMUST00000055636 WizO88286 1684 aaKnown RBP10.35□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Lrriq1Q0P5X1 1673 aa10.35□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Gm7298A0A0N4SVU1 1476 aa10.34□□□□□ -0.75
Clrn1-202ENSMUST00000055636 PxdnQ3UQ28 1475 aa10.34□□□□□ -0.75
Clrn1-202ENSMUST00000055636 Hnrnpul2Q00PI9 745 aaKnown RBP10.32□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Fkbp15Q6P9Q6 1216 aaKnown RBP10.32□□□□□ -0.76
Clrn1-202ENSMUST00000055636 SafbD3YXK2 937 aaKnown RBP10.31□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Chic2Q9D9G3 165 aa10.31□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Polr1aO35134 1717 aaKnown RBP10.31□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Gpatch8A2A6A1 1505 aa10.31□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Kif27Q7M6Z4 1394 aa10.3□□□□□ -0.76
Clrn1-202ENSMUST00000055636 3425401B19RikD3Z1D3 1412 aa10.29□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Gm1043A0A140LJC2 1431 aa10.29□□□□□ -0.76
Clrn1-202ENSMUST00000055636 WrnO09053 1401 aa10.29□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Ift140E9PY46 1464 aa10.29□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Mapk8ip2Q9ERE9 830 aa10.29□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Fam71e1A1L3C1 212 aa10.27□□□□□ -0.76
Clrn1-202ENSMUST00000055636 Kdm5bQ80Y84 1544 aa10.27□□□□□ -0.77
Clrn1-202ENSMUST00000055636 Nup160Q9Z0W3 1402 aaKnown RBP10.27□□□□□ -0.77
Clrn1-202ENSMUST00000055636 Ccnb3Q810T2 1396 aa10.25□□□□□ -0.77
Clrn1-202ENSMUST00000055636 Adamts12Q811B3 1600 aa10.25□□□□□ -0.77
Clrn1-202ENSMUST00000055636 Abca5Q8K448 1642 aa10.25□□□□□ -0.77
Clrn1-202ENSMUST00000055636 Abca16E9PWJ7 1678 aa10.24□□□□□ -0.77
Clrn1-202ENSMUST00000055636 TchhA0A0B4J1F9 1599 aa10.23□□□□□ -0.77
Clrn1-202ENSMUST00000055636 Soga1E1U8D0 1418 aa10.22□□□□□ -0.77
Clrn1-202ENSMUST00000055636 BC005561E9Q5E2 1589 aa10.21□□□□□ -0.77
Clrn1-202ENSMUST00000055636 AknaQ80VW7 1404 aa10.2□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Cc2d2bA0A286YDU8 1405 aa10.19□□□□□ -0.78
Clrn1-202ENSMUST00000055636 NexmifQ5DTT1 1515 aa10.19□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Tnnt3Q9QZ47 272 aa10.19□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Peg3Q3URU2 1571 aa10.19□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Abcc2Q8VI47 1543 aa10.19□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Ncoa3O09000 1398 aa10.18□□□□□ -0.78
Clrn1-202ENSMUST00000055636 A2mQ6GQT1 1474 aa10.18□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Ifnlr1Q8CGK5 535 aa10.18□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Shroom2A2ALU4 1481 aa10.17□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Arhgap31A6X8Z5 1425 aa10.16□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Cabp1Q9JLK7 227 aa10.15□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Hspa5P20029 655 aaKnown RBP10.15□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Neo1P97798 1493 aa10.15□□□□□ -0.78
Clrn1-202ENSMUST00000055636 Pbrm1Q8BSQ9 1634 aaKnown RBP10.15□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Rusc2Q80U22 1514 aa10.15□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Znf710Q3U288 666 aa10.15□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Bcl11aQ9QYE3 773 aa10.15□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Mug1P28665 1476 aa10.14□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Naip2Q9QUK4 1447 aa10.14□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Zfp644E9QA22 1323 aa10.12□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Rapgef6Q5NCJ1 1609 aa10.11□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Jph4Q80WT0 628 aa10.11□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Lmtk2Q3TYD6 1471 aa10.11□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Zbtb7cQ8VCZ7 619 aa10.11□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Eif4g3Q80XI3 1579 aaKnown RBP10.1□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Arhgef40Q3UPH7 1517 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 84.8 ms