RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Tiam1Q60610 1591 aa14.03□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 Lamc3Q9R0B6 1581 aa14.03□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 Wdr62Q3U3T8 1523 aa14.02□□□□□ -0.17
Ccdc40-202ENSMUST00000053440 Naip1Q9QWK5 1403 aa14.01□□□□□ -0.17
Ccdc40-202ENSMUST00000053440 Camsap1A2AHC3 1581 aa14□□□□□ -0.17
Ccdc40-202ENSMUST00000053440 Map3k1P53349 1493 aa14□□□□□ -0.17
Ccdc40-202ENSMUST00000053440 Mroh2bQ7M6Y6 1581 aa13.95□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Ankrd26Q811D2 1581 aa13.95□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Slx4Q6P1D7 1565 aa13.95□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Grin2bQ01097 1482 aa13.94□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Pcf11G3X9Z4 1553 aa13.94□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Tnnt3Q9QZ47 272 aa13.94□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Hspa5P20029 655 aaKnown RBP13.93□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 TchhA0A0B4J1F9 1599 aa13.93□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Rpap1Q80TE0 1409 aa13.93□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Ercc6F8VPZ5 1481 aa13.91□□□□□ -0.18
Ccdc40-202ENSMUST00000053440 Erich3F6QRE9 1637 aa13.89□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Unc13aQ4KUS2 1712 aa13.88□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Ube2uB1AUC4 352 aa13.88□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Fam71e1A1L3C1 212 aa13.87□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 3425401B19RikD3Z1D3 1412 aa13.87□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Cux1P53564 1515 aa13.85□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Npm1Q61937 292 aaKnown RBP13.84□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Znf710Q3U288 666 aa13.84□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 Slc24a1Q91WD8 1130 aa13.84□□□□□ -0.19
Ccdc40-202ENSMUST00000053440 CntlnA2AM05 1397 aa13.83□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Myt1Q8CFC2 1127 aa13.83□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Carmil1Q6EDY6 1374 aa13.81□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Stra8P70278 393 aa13.81□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Cux2P70298 1426 aa13.81□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Sin3aQ60520 1274 aaKnown RBP13.8□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Lmo7E9PYF4 1699 aaKnown RBP13.8□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Fyco1Q8VDC1 1437 aa13.8□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Chic2Q9D9G3 165 aa13.8□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Dhx29Q6PGC1 1365 aaKnown RBP13.78□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Gm13697A2AK42 830 aa13.78□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 UacaQ8CGB3 1411 aa13.78□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Fhad1A6PWD2 1420 aa13.78□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Mia2Q91ZV0 1396 aa13.77□□□□□ -0.2
Ccdc40-202ENSMUST00000053440 Aebp1Q640N1 1128 aa13.77□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Ubl4bQ9CQ84 188 aa13.77□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Ccer2J3QPU5 274 aa13.76□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Ankrd36D3Z4K0 1415 aa13.74□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Vps8Q0P5W1 1427 aa13.73□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Efcab5A0JP43 1406 aa13.73□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Urb2E9Q7L1 1524 aaKnown RBP13.73□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 LrpprcQ6PB66 1392 aaKnown RBP13.72□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Gm7298A0A0N4SVU1 1476 aa13.72□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Duox2A2AQ99 1517 aa13.71□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Naip2Q9QUK4 1447 aa13.71□□□□□ -0.21
Ccdc40-202ENSMUST00000053440 Gm1043A0A140LJC2 1431 aa13.7□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Phldb1Q6PDH0 1371 aaKnown RBP13.69□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Calr4Q3TQS0 420 aa13.69□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 PogzQ8BZH4 1409 aaKnown RBP13.68□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Anp32aO35381 247 aa13.68□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 A2mQ6GQT1 1474 aa13.68□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Ccnb3Q810T2 1396 aa13.66□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Rad54l2Q99NG0 1466 aa13.66□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Peg3Q3URU2 1571 aa13.66□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Smg6P61406 1418 aaKnown RBP13.65□□□□□ -0.22
Ccdc40-202ENSMUST00000053440 Eif5bQ05D44 1216 aaKnown RBP13.64□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 Crocc2F6XLV1 1638 aa13.63□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 Naip5Q9R016 1403 aa13.63□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 Samd9lQ69Z37 1561 aa13.63□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 SynmQ70IV5 1561 aa13.63□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 Nolc1E9Q5C9 702 aaKnown RBP13.62□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 Dennd4bQ3U1Y4 1499 aa13.6□□□□□ -0.23
Ccdc40-202ENSMUST00000053440 Mphosph9A6H5Y1 991 aa13.58□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Mrs2Q5NCE8 434 aa13.57□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Ncoa2Q61026 1462 aa13.56□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Polr1aO35134 1717 aaKnown RBP13.56□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Kif27Q7M6Z4 1394 aa13.55□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Camsap2Q8C1B1 1461 aa13.55□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Zfp644E9QA22 1323 aa13.54□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 P3h3Q8CG70 732 aa13.53□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Cabp1Q9JLK7 227 aa13.53□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Wwc2Q6NXJ0 1187 aa13.53□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 EprsQ8CGC7 1512 aaKnown RBP13.52□□□□□ -0.24
Ccdc40-202ENSMUST00000053440 Ppp4r2Q0VGB7 417 aa13.51□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Gpatch8A2A6A1 1505 aa13.51□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Cul7Q8VE73 1689 aa13.51□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Pkd2O35245 966 aa13.51□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 NexmifQ5DTT1 1515 aa13.5□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 CadpsQ80TJ1 1355 aa13.5□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Usp47Q8BY87 1376 aa13.5□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Lmtk2Q3TYD6 1471 aa13.49□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Thoc2B1AZI6 1594 aaKnown RBP13.48□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 NrdcQ8BHG1 1161 aa13.48□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 BC005561E9Q5E2 1589 aa13.48□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Exoc6Q8R313 802 aa13.48□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Slc4a2P13808 1237 aaKnown RBP13.47□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Supt16hQ920B9 1047 aa13.47□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Pla2r1Q62028 1487 aa13.47□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Wdr43Q6ZQL4 677 aaKnown RBP13.46□□□□□ -0.25
Ccdc40-202ENSMUST00000053440 Pprc1Q6NZN1 1644 aa13.45□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Ncoa1P70365 1447 aa13.43□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Mug1P28665 1476 aa13.43□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Washc2Q6PGL7 1334 aa13.42□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Ift140E9PY46 1464 aa13.42□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Fhod3Q76LL6 1578 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms