RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Polr1aO35134 1717 aaKnown RBP12.43□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Abca5Q8K448 1642 aa12.41□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Eea1Q8BL66 1411 aa12.4□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Nup160Q9Z0W3 1402 aaKnown RBP12.4□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Cux1P53564 1515 aa12.4□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 EprsQ8CGC7 1512 aaKnown RBP12.4□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Ehmt2Q9Z148 1263 aaKnown RBP12.39□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Adamts12Q811B3 1600 aa12.38□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Clip1Q922J3 1391 aa12.38□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Slx4Q6P1D7 1565 aa12.38□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Carmil1Q6EDY6 1374 aa12.38□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Magi3Q9EQJ9 1476 aa12.38□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Pla2r1Q62028 1487 aa12.35□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Rpap1Q80TE0 1409 aa12.34□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 Col17a1Q07563 1470 aa12.34□□□□□ -0.43
Ccdc60-201ENSMUST00000050178 BlmO88700 1416 aa12.33□□□□□ -0.44
Ccdc60-201ENSMUST00000050178 Naip1Q9QWK5 1403 aa12.33□□□□□ -0.44
Ccdc60-201ENSMUST00000050178 Dhx29Q6PGC1 1365 aaKnown RBP12.33□□□□□ -0.44
Ccdc60-201ENSMUST00000050178 Ubl4bQ9CQ84 188 aa12.31□□□□□ -0.44
Ccdc60-201ENSMUST00000050178 Fyco1Q8VDC1 1437 aa12.29□□□□□ -0.44
Ccdc60-201ENSMUST00000050178 Abca16E9PWJ7 1678 aa12.28□□□□□ -0.44
Ccdc60-201ENSMUST00000050178 Cc2d2bA0A286YDU8 1405 aa12.27□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Disp1Q3TDN0 1521 aa12.27□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Mier1Q5UAK0 511 aa12.26□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Gcc2Q8CHG3 1679 aa12.25□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Lmtk2Q3TYD6 1471 aa12.25□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Kiaa1210E9Q0C6 1637 aa12.25□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Grin2aP35436 1464 aa12.25□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Gm1043A0A140LJC2 1431 aa12.25□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Map3k4O08648 1597 aa12.25□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Setd5Q5XJV7 1441 aa12.24□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 CntlnA2AM05 1397 aa12.24□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Arhgef12Q8R4H2 1543 aaKnown RBP12.23□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 NefmP08553 848 aa12.23□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Fhod3Q76LL6 1578 aa12.22□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Dnmt1P13864 1620 aaKnown RBP12.21□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 WizO88286 1684 aaKnown RBP12.21□□□□□ -0.45
Ccdc60-201ENSMUST00000050178 Rad54l2Q99NG0 1466 aa12.2□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Plb1Q3TTY0 1478 aa12.19□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Dnajc5P60904 198 aa12.19□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Npm2Q80W85 207 aa12.19□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Chd1P40201 1711 aa12.19□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Soga1E1U8D0 1418 aa12.18□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Abcc2Q8VI47 1543 aa12.18□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Npm1Q61937 292 aaKnown RBP12.17□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 3425401B19RikD3Z1D3 1412 aa12.16□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Cul7Q8VE73 1689 aa12.15□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 CadpsQ80TJ1 1355 aa12.15□□□□□ -0.46
Ccdc60-201ENSMUST00000050178 Gm7298A0A0N4SVU1 1476 aa12.13□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Cdc42bpaQ3UU96 1719 aa12.12□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Setbp1Q9Z180 1582 aa12.11□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Rrbp1Q99PL5 1605 aaKnown RBP12.1□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 PxdnQ3UQ28 1475 aa12.09□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Il27Q8K3I6 234 aa12.09□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Dennd4bQ3U1Y4 1499 aa12.09□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Neo1P97798 1493 aa12.08□□□□□ -0.47
Ccdc60-201ENSMUST00000050178 Rapgef6Q5NCJ1 1609 aa12.08□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Kiaa1551Q5DTW7 1521 aa12.08□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Kif21bQ9QXL1 1668 aa12.07□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Myt1lP97500 1187 aa12.07□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Arhgef11Q68FM7 1552 aa12.07□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Naip2Q9QUK4 1447 aa12.06□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Fhad1A6PWD2 1420 aa12.06□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Kiaa0556Q8C753 1610 aa12.04□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Pcgf6Q99NA9 353 aa12.04□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Vps8Q0P5W1 1427 aa12.04□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 BC005561E9Q5E2 1589 aa12.03□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Wdr7Q920I9 1489 aa12.03□□□□□ -0.48
Ccdc60-201ENSMUST00000050178 Pprc1Q6NZN1 1644 aa12.02□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Aebp1Q640N1 1128 aa12.02□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Plekhg3Q4VAC9 1341 aa12.01□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 A2mQ6GQT1 1474 aa12.01□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Rfx7F8VPJ6 1459 aa12□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Ankrd36D3Z4K0 1415 aa12□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 NexmifQ5DTT1 1515 aa12□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Cep170Q6A065 1588 aa12□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Lamc1P02468 1607 aaKnown RBP11.99□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Mroh2aD3Z750 1679 aa11.99□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Camsap2Q8C1B1 1461 aa11.99□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 UbtfP25976 765 aaKnown RBP11.98□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Mapkbp1Q6NS57 1503 aa11.97□□□□□ -0.49
Ccdc60-201ENSMUST00000050178 Pdcd11Q6NS46 1862 aaKnown RBP11.95□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Mia2Q91ZV0 1396 aa11.95□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 AdgbG3UZ78 1657 aa11.95□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Clasp1Q80TV8 1535 aaKnown RBP11.95□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Fam208aQ69ZR9 1610 aaKnown RBP11.95□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 UacaQ8CGB3 1411 aa11.94□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Mug1P28665 1476 aa11.93□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Ncoa3O09000 1398 aa11.92□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Kdm6bQ5NCY0 1641 aa11.92□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Adcy10Q8C0T9 1614 aa11.92□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 NhsB1AV60 1647 aa11.91□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Neurl4Q5NCX5 1563 aa11.9□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Ttc37F8VPK0 1563 aa11.9□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 Arhgef40Q3UPH7 1517 aa11.9□□□□□ -0.5
Ccdc60-201ENSMUST00000050178 SphkapQ6NSW3 1687 aa11.89□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Supt5hO55201 1082 aaKnown RBP11.89□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Fgd6Q69ZL1 1399 aa11.88□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Ccdc141E9Q8Q6 1531 aa11.88□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Kif27Q7M6Z4 1394 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms