RNA–Protein interactions for RNA: ENSMUST00000040135.8

Nup43-201, Transcript of Nucleoporin Nup43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup43, Length 1,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43-201ENSMUST00000040135 Atad2Q8CDM1 1040 aa16.12■□□□□ 0.17
Nup43-201ENSMUST00000040135 Znf710Q3U288 666 aa16.11■□□□□ 0.17
Nup43-201ENSMUST00000040135 Pdap1Q3UHX2 181 aaKnown RBP16.09■□□□□ 0.17
Nup43-201ENSMUST00000040135 Spock2Q9ER58 423 aa16.07■□□□□ 0.16
Nup43-201ENSMUST00000040135 ScribQ80U72 1612 aa15.98■□□□□ 0.15
Nup43-201ENSMUST00000040135 Abcc8B2RUS7 1588 aa15.95■□□□□ 0.14
Nup43-201ENSMUST00000040135 Ppp6r1Q7TSI3 856 aa15.88■□□□□ 0.13
Nup43-201ENSMUST00000040135 TMEM121BQ99MX7 572 aa15.87■□□□□ 0.13
Nup43-201ENSMUST00000040135 Chrm1P12657 460 aa15.85■□□□□ 0.13
Nup43-201ENSMUST00000040135 Fxr2Q9WVR4 673 aaKnown RBP15.85■□□□□ 0.13
Nup43-201ENSMUST00000040135 Prdm10Q3UTQ7 1184 aa15.82■□□□□ 0.12
Nup43-201ENSMUST00000040135 Ferd3lQ923Z4 168 aa15.81■□□□□ 0.12
Nup43-201ENSMUST00000040135 OsbpQ3B7Z2 805 aa15.8■□□□□ 0.12
Nup43-201ENSMUST00000040135 Arhgef1Q61210 920 aaKnown RBP15.76■□□□□ 0.11
Nup43-201ENSMUST00000040135 Gm45233A0A0N4SVE0 221 aa15.75■□□□□ 0.11
Nup43-201ENSMUST00000040135 Ndufv2Q9D6J6 248 aa15.74■□□□□ 0.11
Nup43-201ENSMUST00000040135 Tulp1Q9Z273 543 aa15.72■□□□□ 0.11
Nup43-201ENSMUST00000040135 Znf579Q80VM4 562 aa15.71■□□□□ 0.11
Nup43-201ENSMUST00000040135 Znf516Q7TSH3 1157 aa15.7■□□□□ 0.1
Nup43-201ENSMUST00000040135 Evx2P49749 475 aa15.66■□□□□ 0.1
Nup43-201ENSMUST00000040135 TimelessQ9R1X4 1197 aa15.66■□□□□ 0.1
Nup43-201ENSMUST00000040135 Dmrta2A2A9A2 531 aa15.63■□□□□ 0.09
Nup43-201ENSMUST00000040135 Bclaf1Q8K019 919 aaKnown RBP15.63■□□□□ 0.09
Nup43-201ENSMUST00000040135 Zbtb22Q9Z0G7 638 aa15.6■□□□□ 0.09
Nup43-201ENSMUST00000040135 Kiaa1522A2A7S8 1013 aa15.57■□□□□ 0.08
Nup43-201ENSMUST00000040135 Prim1P20664 417 aa15.56■□□□□ 0.08
Nup43-201ENSMUST00000040135 Pcdhb17Q91VD8 799 aa15.56■□□□□ 0.08
Nup43-201ENSMUST00000040135 Kank4Q6P9J5 1016 aa15.52■□□□□ 0.08
Nup43-201ENSMUST00000040135 Pak3Q61036 559 aa15.47■□□□□ 0.07
Nup43-201ENSMUST00000040135 ZxdbA2CE44 873 aa15.43■□□□□ 0.06
Nup43-201ENSMUST00000040135 Slc4a2P13808 1237 aaKnown RBP15.43■□□□□ 0.06
Nup43-201ENSMUST00000040135 C1qbpO35658 278 aa15.41■□□□□ 0.06
Nup43-201ENSMUST00000040135 Jph4Q80WT0 628 aa15.41■□□□□ 0.06
Nup43-201ENSMUST00000040135 Rsph6aQ8CDR2 708 aa15.37■□□□□ 0.05
Nup43-201ENSMUST00000040135 Stk3Q9JI10 497 aa15.37■□□□□ 0.05
Nup43-201ENSMUST00000040135 CatipB9EKE5 520 aa15.32■□□□□ 0.04
Nup43-201ENSMUST00000040135 Rgl2Q61193 778 aa15.29■□□□□ 0.04
Nup43-201ENSMUST00000040135 Evi5P97366 809 aa15.27■□□□□ 0.04
Nup43-201ENSMUST00000040135 E9Q0B3 247 aa15.25■□□□□ 0.03
Nup43-201ENSMUST00000040135 Slc24a1Q91WD8 1130 aa15.23■□□□□ 0.03
Nup43-201ENSMUST00000040135 Rnf225Q9D7D1 332 aa15.22■□□□□ 0.03
Nup43-201ENSMUST00000040135 NacadQ5SWP3 1504 aa15.22■□□□□ 0.03
Nup43-201ENSMUST00000040135 Kdm5dQ62240 1548 aa15.21■□□□□ 0.03
Nup43-201ENSMUST00000040135 Stk24Q99KH8 431 aa15.18■□□□□ 0.02
Nup43-201ENSMUST00000040135 Stk25Q9Z2W1 426 aa15.17■□□□□ 0.02
Nup43-201ENSMUST00000040135 Fam181bQ80VF6 417 aa15.15■□□□□ 0.02
Nup43-201ENSMUST00000040135 Nap1l5Q9JJF0 156 aa15.15■□□□□ 0.02
Nup43-201ENSMUST00000040135 UncxO08934 530 aa15.14■□□□□ 0.01
Nup43-201ENSMUST00000040135 Actn4P57780 912 aaKnown RBP15.14■□□□□ 0.01
Nup43-201ENSMUST00000040135 Cypt1Q8CH20 168 aa15.14■□□□□ 0.01
Nup43-201ENSMUST00000040135 Dcbld2Q91ZV3 769 aa15.14■□□□□ 0.01
Nup43-201ENSMUST00000040135 Mier1Q5UAK0 511 aa15.13■□□□□ 0.01
Nup43-201ENSMUST00000040135 Fndc3aQ8BX90 1198 aa15.13■□□□□ 0.01
Nup43-201ENSMUST00000040135 Scnn1bQ9WU38 638 aa15.11■□□□□ 0.01
Nup43-201ENSMUST00000040135 Dnajc5P60904 198 aa15.1■□□□□ 0.01
Nup43-201ENSMUST00000040135 Fkbp4P30416 458 aa15.08■□□□□ 0
Nup43-201ENSMUST00000040135 Pdzrn4E9PUZ9 1014 aa15.06■□□□□ 0
Nup43-201ENSMUST00000040135 Lhx8O35652 367 aa15.02■□□□□ -0
Nup43-201ENSMUST00000040135 Tox2A2A472 547 aa15□□□□□ -0.01
Nup43-201ENSMUST00000040135 Sycp2Q9CUU3 1500 aa15□□□□□ -0.01
Nup43-201ENSMUST00000040135 BicraF8VPZ9 1578 aa14.99□□□□□ -0.01
Nup43-201ENSMUST00000040135 Ankrd65F6YK91 380 aa14.98□□□□□ -0.01
Nup43-201ENSMUST00000040135 Noa1Q9JJG9 693 aaKnown RBP14.96□□□□□ -0.01
Nup43-201ENSMUST00000040135 Skap1Q3UUV5 355 aa14.95□□□□□ -0.02
Nup43-201ENSMUST00000040135 Dkk1O54908 272 aa14.94□□□□□ -0.02
Nup43-201ENSMUST00000040135 Thoc2B1AZI6 1594 aaKnown RBP14.94□□□□□ -0.02
Nup43-201ENSMUST00000040135 Sgip1Q8VD37 806 aa14.93□□□□□ -0.02
Nup43-201ENSMUST00000040135 Erich4Q3UNU4 136 aa14.92□□□□□ -0.02
Nup43-201ENSMUST00000040135 St18Q80TY4 1045 aa14.91□□□□□ -0.02
Nup43-201ENSMUST00000040135 Axin1O35625 863 aa14.89□□□□□ -0.03
Nup43-201ENSMUST00000040135 Msh5Q9QUM7 833 aa14.89□□□□□ -0.03
Nup43-201ENSMUST00000040135 Otop3Q80UF9 577 aa14.88□□□□□ -0.03
Nup43-201ENSMUST00000040135 Apba1B2RUJ5 842 aa14.85□□□□□ -0.03
Nup43-201ENSMUST00000040135 PsdQ5DTT2 1024 aa14.84□□□□□ -0.03
Nup43-201ENSMUST00000040135 P3h3Q8CG70 732 aa14.81□□□□□ -0.04
Nup43-201ENSMUST00000040135 Map4k4P97820 1233 aaKnown RBP14.78□□□□□ -0.04
Nup43-201ENSMUST00000040135 Ier5lQ99J55 406 aa14.76□□□□□ -0.05
Nup43-201ENSMUST00000040135 1700006A11RikB9EHI3 544 aa14.72□□□□□ -0.05
Nup43-201ENSMUST00000040135 Irx5Q9JKQ4 484 aa14.72□□□□□ -0.05
Nup43-201ENSMUST00000040135 Dnm1lQ8K1M6 742 aa14.7□□□□□ -0.06
Nup43-201ENSMUST00000040135 Mnx1Q9QZW9 404 aa14.7□□□□□ -0.06
Nup43-201ENSMUST00000040135 Zeb1Q64318 1117 aa14.69□□□□□ -0.06
Nup43-201ENSMUST00000040135 EdaraddQ8VHX2 208 aa14.68□□□□□ -0.06
Nup43-201ENSMUST00000040135 Cc2d2aQ8CFW7 1633 aa14.66□□□□□ -0.06
Nup43-201ENSMUST00000040135 Gga1Q8R0H9 635 aa14.65□□□□□ -0.06
Nup43-201ENSMUST00000040135 Scarf1Q5ND28 820 aa14.64□□□□□ -0.07
Nup43-201ENSMUST00000040135 Neurod1Q60867 357 aa14.64□□□□□ -0.07
Nup43-201ENSMUST00000040135 Hmx1O70218 332 aa14.62□□□□□ -0.07
Nup43-201ENSMUST00000040135 Krtap4-1Q3UUY3 169 aa14.62□□□□□ -0.07
Nup43-201ENSMUST00000040135 Pds5bQ4VA53 1446 aaKnown RBP14.62□□□□□ -0.07
Nup43-201ENSMUST00000040135 Pcdhb20Q91XZ9 799 aa14.62□□□□□ -0.07
Nup43-201ENSMUST00000040135 Speer2E9Q9U2 264 aa14.61□□□□□ -0.07
Nup43-201ENSMUST00000040135 Sptlc1O35704 473 aa14.61□□□□□ -0.07
Nup43-201ENSMUST00000040135 Kdm2aP59997 1161 aa14.6□□□□□ -0.07
Nup43-201ENSMUST00000040135 Lrrc14bQ3UJB3 510 aa14.59□□□□□ -0.07
Nup43-201ENSMUST00000040135 Adnp2Q8CHC8 1165 aaKnown RBP14.59□□□□□ -0.07
Nup43-201ENSMUST00000040135 Onecut3Q8K557 490 aa14.53□□□□□ -0.08
Nup43-201ENSMUST00000040135 GcgrQ61606 485 aa14.52□□□□□ -0.09
Nup43-201ENSMUST00000040135 IncenpQ9WU62 880 aa14.5□□□□□ -0.09
Nup43-201ENSMUST00000040135 Dcaf1Q80TR8 1506 aa14.49□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms