RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Carmil1Q6EDY6 1374 aa31,44■■■□□ 2,62
Trim47-201ENSMUST00000021120 Pla2r1Q62028 1487 aa31,43■■■□□ 2,62
Trim47-201ENSMUST00000021120 Nup160Q9Z0W3 1402 aaKnown RBP31,41■■■□□ 2,62
Trim47-201ENSMUST00000021120 Rusc2Q80U22 1514 aa31,35■■■□□ 2,61
Trim47-201ENSMUST00000021120 Gpatch8A2A6A1 1505 aa31,32■■■□□ 2,6
Trim47-201ENSMUST00000021120 Cc2d2bA0A286YDU8 1405 aa31,3■■■□□ 2,6
Trim47-201ENSMUST00000021120 Polr1aO35134 1717 aaKnown RBP31,27■■■□□ 2,6
Trim47-201ENSMUST00000021120 EprsQ8CGC7 1512 aaKnown RBP31,24■■■□□ 2,59
Trim47-201ENSMUST00000021120 Supt5hO55201 1082 aaKnown RBP31,23■■■□□ 2,59
Trim47-201ENSMUST00000021120 Cux1P53564 1515 aa31,19■■■□□ 2,58
Trim47-201ENSMUST00000021120 Ankrd26Q811D2 1581 aa31,17■■■□□ 2,58
Trim47-201ENSMUST00000021120 Eea1Q8BL66 1411 aa31,17■■■□□ 2,58
Trim47-201ENSMUST00000021120 Adamts12Q811B3 1600 aa31,14■■■□□ 2,58
Trim47-201ENSMUST00000021120 WizO88286 1684 aaKnown RBP31,13■■■□□ 2,57
Trim47-201ENSMUST00000021120 Setd5Q5XJV7 1441 aa31,12■■■□□ 2,57
Trim47-201ENSMUST00000021120 Erich3F6QRE9 1637 aa31,11■■■□□ 2,57
Trim47-201ENSMUST00000021120 Rpap1Q80TE0 1409 aa31,1■■■□□ 2,57
Trim47-201ENSMUST00000021120 TchhA0A0B4J1F9 1599 aa31,1■■■□□ 2,57
Trim47-201ENSMUST00000021120 Fyco1Q8VDC1 1437 aa31,1■■■□□ 2,57
Trim47-201ENSMUST00000021120 Abca16E9PWJ7 1678 aa31,07■■■□□ 2,56
Trim47-201ENSMUST00000021120 CadpsQ80TJ1 1355 aa31,02■■■□□ 2,56
Trim47-201ENSMUST00000021120 Gm7298A0A0N4SVU1 1476 aa31■■■□□ 2,55
Trim47-201ENSMUST00000021120 Abca5Q8K448 1642 aa31■■■□□ 2,55
Trim47-201ENSMUST00000021120 Arap1Q4LDD4 1452 aa31■■■□□ 2,55
Trim47-201ENSMUST00000021120 PxdnQ3UQ28 1475 aa30,99■■■□□ 2,55
Trim47-201ENSMUST00000021120 Lmo7E9PYF4 1699 aaKnown RBP30,94■■■□□ 2,54
Trim47-201ENSMUST00000021120 Pcf11G3X9Z4 1553 aa30,92■■■□□ 2,54
Trim47-201ENSMUST00000021120 Soga1E1U8D0 1418 aa30,9■■■□□ 2,54
Trim47-201ENSMUST00000021120 Ap3b1Q9Z1T1 1105 aa30,89■■■□□ 2,54
Trim47-201ENSMUST00000021120 Arhgef5E9Q7D5 1581 aa30,89■■■□□ 2,54
Trim47-201ENSMUST00000021120 Abcc2Q8VI47 1543 aa30,88■■■□□ 2,53
Trim47-201ENSMUST00000021120 Arhgap27A2AB59 869 aa30,83■■■□□ 2,53
Trim47-201ENSMUST00000021120 Fgd6Q69ZL1 1399 aa30,8■■■□□ 2,52
Trim47-201ENSMUST00000021120 NefmP08553 848 aa30,77■■■□□ 2,52
Trim47-201ENSMUST00000021120 Map3k4O08648 1597 aa30,76■■■□□ 2,52
Trim47-201ENSMUST00000021120 Dnmt1P13864 1620 aaKnown RBP30,76■■■□□ 2,51
Trim47-201ENSMUST00000021120 Aebp1Q640N1 1128 aa30,75■■■□□ 2,51
Trim47-201ENSMUST00000021120 BlmO88700 1416 aa30,74■■■□□ 2,51
Trim47-201ENSMUST00000021120 Neurod1Q60867 357 aa30,73■■■□□ 2,51
Trim47-201ENSMUST00000021120 Tiam1Q60610 1591 aa30,73■■■□□ 2,51
Trim47-201ENSMUST00000021120 Shroom2A2ALU4 1481 aa30,71■■■□□ 2,51
Trim47-201ENSMUST00000021120 Plekhg3Q4VAC9 1341 aa30,7■■■□□ 2,51
Trim47-201ENSMUST00000021120 CntlnA2AM05 1397 aa30,69■■■□□ 2,5
Trim47-201ENSMUST00000021120 BC005561E9Q5E2 1589 aa30,69■■■□□ 2,5
Trim47-201ENSMUST00000021120 WrnO09053 1401 aa30,68■■■□□ 2,5
Trim47-201ENSMUST00000021120 AknaQ80VW7 1404 aa30,68■■■□□ 2,5
Trim47-201ENSMUST00000021120 Slx4Q6P1D7 1565 aa30,65■■■□□ 2,5
Trim47-201ENSMUST00000021120 Naip1Q9QWK5 1403 aa30,65■■■□□ 2,5
Trim47-201ENSMUST00000021120 Peg3Q3URU2 1571 aa30,63■■■□□ 2,49
Trim47-201ENSMUST00000021120 Neo1P97798 1493 aa30,63■■■□□ 2,49
Trim47-201ENSMUST00000021120 Las1lA2BE28 776 aaKnown RBP30,61■■■□□ 2,49
Trim47-201ENSMUST00000021120 Kif27Q7M6Z4 1394 aa30,57■■■□□ 2,48
Trim47-201ENSMUST00000021120 Mier1Q5UAK0 511 aa30,52■■■□□ 2,48
Trim47-201ENSMUST00000021120 Abcc1O35379 1528 aa30,49■■■□□ 2,47
Trim47-201ENSMUST00000021120 Zcchc11B2RX14 1644 aaKnown RBP30,46■■■□□ 2,47
Trim47-201ENSMUST00000021120 Rapgef6Q5NCJ1 1609 aa30,46■■■□□ 2,47
Trim47-201ENSMUST00000021120 Chd1P40201 1711 aa30,46■■■□□ 2,47
Trim47-201ENSMUST00000021120 Arhgef12Q8R4H2 1543 aaKnown RBP30,46■■■□□ 2,47
Trim47-201ENSMUST00000021120 Lmod2Q3UHZ5 550 aa30,45■■■□□ 2,47
Trim47-201ENSMUST00000021120 Gm1043A0A140LJC2 1431 aa30,45■■■□□ 2,46
Trim47-201ENSMUST00000021120 UbtfP25976 765 aaKnown RBP30,44■■■□□ 2,46
Trim47-201ENSMUST00000021120 Pelp1Q9DBD5 1123 aaKnown RBP30,43■■■□□ 2,46
Trim47-201ENSMUST00000021120 Gm14025A2AP89 1413 aa30,43■■■□□ 2,46
Trim47-201ENSMUST00000021120 Rrbp1Q99PL5 1605 aaKnown RBP30,41■■■□□ 2,46
Trim47-201ENSMUST00000021120 Jph4Q80WT0 628 aa30,41■■■□□ 2,46
Trim47-201ENSMUST00000021120 Pabpn1Q8CCS6 302 aaKnown RBP30,41■■■□□ 2,46
Trim47-201ENSMUST00000021120 Arhgap31A6X8Z5 1425 aa30,4■■■□□ 2,46
Trim47-201ENSMUST00000021120 Ccdc141E9Q8Q6 1531 aa30,37■■■□□ 2,45
Trim47-201ENSMUST00000021120 Myt1Q8CFC2 1127 aa30,35■■■□□ 2,45
Trim47-201ENSMUST00000021120 Ncoa2Q61026 1462 aa30,31■■■□□ 2,44
Trim47-201ENSMUST00000021120 Sall2Q9QX96 1004 aa30,31■■■□□ 2,44
Trim47-201ENSMUST00000021120 Arhgef11Q68FM7 1552 aa30,28■■■□□ 2,44
Trim47-201ENSMUST00000021120 Mroh2aD3Z750 1679 aa30,25■■■□□ 2,43
Trim47-201ENSMUST00000021120 Mug1P28665 1476 aa30,24■■■□□ 2,43
Trim47-201ENSMUST00000021120 NexmifQ5DTT1 1515 aa30,22■■■□□ 2,43
Trim47-201ENSMUST00000021120 Fkbp15Q6P9Q6 1216 aaKnown RBP30,22■■■□□ 2,43
Trim47-201ENSMUST00000021120 Gapvd1Q6PAR5 1458 aa30,21■■■□□ 2,43
Trim47-201ENSMUST00000021120 Ncoa3O09000 1398 aa30,2■■■□□ 2,43
Trim47-201ENSMUST00000021120 Ythdc2B2RR83 1445 aaKnown RBP30,18■■■□□ 2,42
Trim47-201ENSMUST00000021120 Magi1Q6RHR9 1471 aa30,18■■■□□ 2,42
Trim47-201ENSMUST00000021120 Lmtk2Q3TYD6 1471 aa30,17■■■□□ 2,42
Trim47-201ENSMUST00000021120 Cdc42bpaQ3UU96 1719 aa30,14■■■□□ 2,42
Trim47-201ENSMUST00000021120 Kdm5bQ80Y84 1544 aa30,14■■■□□ 2,42
Trim47-201ENSMUST00000021120 Dhx57Q6P5D3 1388 aaKnown RBP30,13■■■□□ 2,41
Trim47-201ENSMUST00000021120 Gcc2Q8CHG3 1679 aa30,13■■■□□ 2,41
Trim47-201ENSMUST00000021120 Cep170Q6A065 1588 aa30,12■■■□□ 2,41
Trim47-201ENSMUST00000021120 Ccnb3Q810T2 1396 aa30,11■■■□□ 2,41
Trim47-201ENSMUST00000021120 Kiaa1551Q5DTW7 1521 aa30,1■■■□□ 2,41
Trim47-201ENSMUST00000021120 Anks4bQ8K3X6 423 aa30,1■■■□□ 2,41
Trim47-201ENSMUST00000021120 PtprtQ99M80 1454 aa30,08■■■□□ 2,41
Trim47-201ENSMUST00000021120 Cul7Q8VE73 1689 aa30,08■■■□□ 2,41
Trim47-201ENSMUST00000021120 Prex2Q3LAC4 1598 aa30,07■■■□□ 2,4
Trim47-201ENSMUST00000021120 Fancd2Q80V62 1450 aa30,07■■■□□ 2,4
Trim47-201ENSMUST00000021120 Fam163aQ8CAA5 168 aa30,05■■■□□ 2,4
Trim47-201ENSMUST00000021120 Ncapd3Q6ZQK0 1506 aa30,03■■■□□ 2,4
Trim47-201ENSMUST00000021120 NhsB1AV60 1647 aa30,03■■■□□ 2,4
Trim47-201ENSMUST00000021120 Mapkbp1Q6NS57 1503 aa30,02■■■□□ 2,4
Trim47-201ENSMUST00000021120 3425401B19RikD3Z1D3 1412 aa29,98■■■□□ 2,39
Trim47-201ENSMUST00000021120 CenpbP27790 599 aa29,98■■■□□ 2,39
Trim47-201ENSMUST00000021120 Kiaa1210E9Q0C6 1637 aa29,96■■■□□ 2,39
Retrieved 100 of 22,080 RNA–protein pairs in 20,8 ms