RNA–Protein interactions for RNA: ENSMUST00000021043.4

Ccl1-201, Transcript of C-C motif chemokine 1, mousemouse

TSL 1 (best) BASIC

Gene Ccl1, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1-201ENSMUST00000021043 AknaQ80VW7 1404 aa19.63■□□□□ 0.73
Ccl1-201ENSMUST00000021043 Zcchc11B2RX14 1644 aaKnown RBP19.59■□□□□ 0.73
Ccl1-201ENSMUST00000021043 Rapgef2Q8CHG7 1496 aa19.59■□□□□ 0.73
Ccl1-201ENSMUST00000021043 Arhgap27A2AB59 869 aa19.58■□□□□ 0.72
Ccl1-201ENSMUST00000021043 EprsQ8CGC7 1512 aaKnown RBP19.56■□□□□ 0.72
Ccl1-201ENSMUST00000021043 Gapvd1Q6PAR5 1458 aa19.54■□□□□ 0.72
Ccl1-201ENSMUST00000021043 Abcc1O35379 1528 aa19.53■□□□□ 0.72
Ccl1-201ENSMUST00000021043 Carmil1Q6EDY6 1374 aa19.53■□□□□ 0.72
Ccl1-201ENSMUST00000021043 PxdnQ3UQ28 1475 aa19.53■□□□□ 0.72
Ccl1-201ENSMUST00000021043 TchhA0A0B4J1F9 1599 aa19.53■□□□□ 0.72
Ccl1-201ENSMUST00000021043 CadpsQ80TJ1 1355 aa19.52■□□□□ 0.72
Ccl1-201ENSMUST00000021043 Arhgap35Q91YM2 1499 aa19.52■□□□□ 0.72
Ccl1-201ENSMUST00000021043 WizO88286 1684 aaKnown RBP19.51■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Abcc2Q8VI47 1543 aa19.51■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Adgrl3Q80TS3 1537 aa19.49■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Abca16E9PWJ7 1678 aa19.49■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Cep170Q6A065 1588 aa19.49■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Adamts12Q811B3 1600 aa19.48■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Gm156Q58A37 223 aa19.47■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Map3k1P53349 1493 aa19.47■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Dnmt1P13864 1620 aaKnown RBP19.47■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Neo1P97798 1493 aa19.46■□□□□ 0.71
Ccl1-201ENSMUST00000021043 Map3k4O08648 1597 aa19.44■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Ythdc2B2RR83 1445 aaKnown RBP19.44■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Soga1E1U8D0 1418 aa19.44■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Rpap1Q80TE0 1409 aa19.44■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Cep162Q6ZQ06 1403 aa19.42■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Myt1lP97500 1187 aa19.41■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Gm7298A0A0N4SVU1 1476 aa19.41■□□□□ 0.7
Ccl1-201ENSMUST00000021043 Clip1Q922J3 1391 aa19.39■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Gm14025A2AP89 1413 aa19.38■□□□□ 0.69
Ccl1-201ENSMUST00000021043 BC005561E9Q5E2 1589 aa19.38■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Ttbk1Q6PCN3 1308 aa19.38■□□□□ 0.69
Ccl1-201ENSMUST00000021043 PtprtQ99M80 1454 aa19.37■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Eif4g1Q6NZJ6 1600 aaKnown RBP19.36■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Chd1P40201 1711 aa19.35■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Slx4Q6P1D7 1565 aa19.35■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Polr1aO35134 1717 aaKnown RBP19.34■□□□□ 0.69
Ccl1-201ENSMUST00000021043 Arhgef5E9Q7D5 1581 aa19.32■□□□□ 0.68
Ccl1-201ENSMUST00000021043 Jph4Q80WT0 628 aa19.32■□□□□ 0.68
Ccl1-201ENSMUST00000021043 Cux1P53564 1515 aa19.3■□□□□ 0.68
Ccl1-201ENSMUST00000021043 WrnO09053 1401 aa19.27■□□□□ 0.68
Ccl1-201ENSMUST00000021043 Abca5Q8K448 1642 aa19.26■□□□□ 0.67
Ccl1-201ENSMUST00000021043 Fkbp15Q6P9Q6 1216 aaKnown RBP19.25■□□□□ 0.67
Ccl1-201ENSMUST00000021043 Arhgef12Q8R4H2 1543 aaKnown RBP19.25■□□□□ 0.67
Ccl1-201ENSMUST00000021043 Fyco1Q8VDC1 1437 aa19.24■□□□□ 0.67
Ccl1-201ENSMUST00000021043 Ifnlr1Q8CGK5 535 aa19.22■□□□□ 0.67
Ccl1-201ENSMUST00000021043 AI481877A2ALV5 1481 aa19.2■□□□□ 0.66
Ccl1-201ENSMUST00000021043 Pprc1Q6NZN1 1644 aa19.19■□□□□ 0.66
Ccl1-201ENSMUST00000021043 Pcdh10E9PXQ7 1057 aa19.19■□□□□ 0.66
Ccl1-201ENSMUST00000021043 Setbp1Q9Z180 1582 aa19.15■□□□□ 0.66
Ccl1-201ENSMUST00000021043 Ankrd26Q811D2 1581 aa19.12■□□□□ 0.65
Ccl1-201ENSMUST00000021043 Ppp1r18Q8BQ30 594 aa19.12■□□□□ 0.65
Ccl1-201ENSMUST00000021043 Arhgap31A6X8Z5 1425 aa19.08■□□□□ 0.65
Ccl1-201ENSMUST00000021043 Rrbp1Q99PL5 1605 aaKnown RBP19.08■□□□□ 0.65
Ccl1-201ENSMUST00000021043 Aebp1Q640N1 1128 aa19.08■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Igf1rQ60751 1373 aa19.07■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Kdm5bQ80Y84 1544 aa19.06■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Setd5Q5XJV7 1441 aa19.06■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Arid3cA6PWV5 409 aa19.05■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Ap3b1Q9Z1T1 1105 aa19.03■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Ak9G3UYQ4 1894 aa19.02■□□□□ 0.64
Ccl1-201ENSMUST00000021043 Ccdc141E9Q8Q6 1531 aa19.01■□□□□ 0.63
Ccl1-201ENSMUST00000021043 Kif27Q7M6Z4 1394 aa19■□□□□ 0.63
Ccl1-201ENSMUST00000021043 Lrrc9Q8CDN9 1456 aa18.99■□□□□ 0.63
Ccl1-201ENSMUST00000021043 Eea1Q8BL66 1411 aa18.99■□□□□ 0.63
Ccl1-201ENSMUST00000021043 Znf608Q56A10 1511 aa18.97■□□□□ 0.63
Ccl1-201ENSMUST00000021043 BlmO88700 1416 aa18.96■□□□□ 0.63
Ccl1-201ENSMUST00000021043 Wdr7Q920I9 1489 aa18.96■□□□□ 0.63
Ccl1-201ENSMUST00000021043 Ncoa2Q61026 1462 aa18.94■□□□□ 0.62
Ccl1-201ENSMUST00000021043 Clasp1Q80TV8 1535 aaKnown RBP18.94■□□□□ 0.62
Ccl1-201ENSMUST00000021043 NhsB1AV60 1647 aa18.92■□□□□ 0.62
Ccl1-201ENSMUST00000021043 Erich3F6QRE9 1637 aa18.92■□□□□ 0.62
Ccl1-201ENSMUST00000021043 Rapgef6Q5NCJ1 1609 aa18.92■□□□□ 0.62
Ccl1-201ENSMUST00000021043 Atp10dQ8K2X1 1416 aa18.91■□□□□ 0.62
Ccl1-201ENSMUST00000021043 Lmo7E9PYF4 1699 aaKnown RBP18.89■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Pcf11G3X9Z4 1553 aa18.89■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Mroh2aD3Z750 1679 aa18.89■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Fancd2Q80V62 1450 aa18.87■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Cul7Q8VE73 1689 aa18.87■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Ttc37F8VPK0 1563 aa18.85■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Depdc5P61460 1591 aa18.85■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Magi1Q6RHR9 1471 aa18.85■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Arap1Q4LDD4 1452 aa18.84■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Gcc2Q8CHG3 1679 aa18.83■□□□□ 0.61
Ccl1-201ENSMUST00000021043 Mapkbp1Q6NS57 1503 aa18.82■□□□□ 0.6
Ccl1-201ENSMUST00000021043 CntlnA2AM05 1397 aa18.81■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Ncoa3O09000 1398 aa18.81■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Zfyve16Q80U44 1528 aa18.81■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Arhgef11Q68FM7 1552 aa18.81■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Lmod2Q3UHZ5 550 aa18.79■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Kiaa1210E9Q0C6 1637 aa18.78■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Fam163aQ8CAA5 168 aa18.78■□□□□ 0.6
Ccl1-201ENSMUST00000021043 AdgbG3UZ78 1657 aa18.77■□□□□ 0.6
Ccl1-201ENSMUST00000021043 Prex2Q3LAC4 1598 aa18.76■□□□□ 0.59
Ccl1-201ENSMUST00000021043 Mug1P28665 1476 aa18.76■□□□□ 0.59
Ccl1-201ENSMUST00000021043 Dhx57Q6P5D3 1388 aaKnown RBP18.75■□□□□ 0.59
Ccl1-201ENSMUST00000021043 Abca8bQ8K440 1620 aa18.74■□□□□ 0.59
Ccl1-201ENSMUST00000021043 Gm1043A0A140LJC2 1431 aa18.7■□□□□ 0.58
Ccl1-201ENSMUST00000021043 A2mQ6GQT1 1474 aa18.7■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms