RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PHLDA1Q8WV24 401 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-226ENST00000641756 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 OR4C5Q8NGB2 326 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
PHGDH-226ENST00000641756 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 TMEM170BQ5T4T1 132 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 LINC00482Q8N8I6 264 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 ZNF479Q96JC4 524 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 FAM110AQ9BQ89 295 aa12.86□□□□□ -0.35
PHGDH-226ENST00000641756 CEMP1Q6PRD7 247 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-226ENST00000641756 RAB37Q96AX2 223 aa12.85□□□□□ -0.35
PHGDH-226ENST00000641756 NOTCH3Q9UM47 2321 aa12.85□□□□□ -0.35
PHGDH-226ENST00000641756 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
PHGDH-226ENST00000641756 H3BRM9 83 aa12.84□□□□□ -0.35
PHGDH-226ENST00000641756 AMMECR1LQ6DCA0 310 aa12.84□□□□□ -0.35
PHGDH-226ENST00000641756 CEND1Q8N111 149 aa12.84□□□□□ -0.35
PHGDH-226ENST00000641756 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
PHGDH-226ENST00000641756 CHCHD7Q9BUK0 85 aa12.84□□□□□ -0.35
PHGDH-226ENST00000641756 ZNF815PA8K554 130 aa12.83□□□□□ -0.35
PHGDH-226ENST00000641756 HERVK_113P61574 105 aa12.83□□□□□ -0.35
PHGDH-226ENST00000641756 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.35
PHGDH-226ENST00000641756 VCX2Q9H322 139 aa12.83□□□□□ -0.35
PHGDH-226ENST00000641756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-226ENST00000641756 IGKV2-29A2NJV5 120 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-226ENST00000641756 RNASE13Q5GAN3 156 aaKnown RBP12.82□□□□□ -0.36
PHGDH-226ENST00000641756 SPATA3Q8NHX4 192 aa12.82□□□□□ -0.36
PHGDH-226ENST00000641756 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
PHGDH-226ENST00000641756 C2CD3Q4AC94 2353 aa12.82□□□□□ -0.36
PHGDH-226ENST00000641756 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
PHGDH-226ENST00000641756 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
PHGDH-226ENST00000641756 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
PHGDH-226ENST00000641756 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
PHGDH-226ENST00000641756 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
PHGDH-226ENST00000641756 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
PHGDH-226ENST00000641756 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
PHGDH-226ENST00000641756 TM2D2Q9BX73 214 aa12.81□□□□□ -0.36
PHGDH-226ENST00000641756 C9orf118A6NHY6 69 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 H3BUT2 72 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 K7ERJ3 54 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 COTL1Q14019 142 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 PYGO1Q9Y3Y4 419 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 NSD1Q96L73 2696 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-226ENST00000641756 TSPEAR-AS2P59090 65 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
PHGDH-226ENST00000641756 TRAV4A0A0B4J268 109 aa12.79□□□□□ -0.36
PHGDH-226ENST00000641756 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
PHGDH-226ENST00000641756 NHP2Q9NX24 153 aaKnown RBP12.79□□□□□ -0.36
PHGDH-226ENST00000641756 UBE2D4Q9Y2X8 147 aa12.79□□□□□ -0.36
PHGDH-226ENST00000641756 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
PHGDH-226ENST00000641756 DAZ2Q13117 558 aaKnown RBP12.79□□□□□ -0.36
PHGDH-226ENST00000641756 TAL2Q16559 108 aa12.79□□□□□ -0.36
PHGDH-226ENST00000641756 SCGB1D4Q6XE38 83 aa12.79□□□□□ -0.36
PHGDH-226ENST00000641756 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 K7EQD1 137 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 GAGE7O76087 117 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 GAGE12FP0CL80 117 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 GAGE12GP0CL81 117 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 GAGE12IP0CL82 117 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 ZNF22P17026 224 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-226ENST00000641756 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 AMELXQ99217 191 aa12.78□□□□□ -0.36
PHGDH-226ENST00000641756 IGHV3-64A0A075B6Q5 118 aa12.77□□□□□ -0.36
PHGDH-226ENST00000641756 TMEM223A0PJW6 202 aa12.77□□□□□ -0.37
PHGDH-226ENST00000641756 SLC25A29Q8N8R3 303 aa12.77□□□□□ -0.37
PHGDH-226ENST00000641756 HIVEP1P15822 2718 aa12.77□□□□□ -0.37
PHGDH-226ENST00000641756 TRGV2A0A075B6R0 118 aa12.76□□□□□ -0.37
PHGDH-226ENST00000641756 Q6ZUT4 128 aa12.76□□□□□ -0.37
PHGDH-226ENST00000641756 SPANXA1Q9NS26 97 aa12.76□□□□□ -0.37
PHGDH-226ENST00000641756 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
PHGDH-226ENST00000641756 J3QQQ9 107 aa12.75□□□□□ -0.37
PHGDH-226ENST00000641756 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
PHGDH-226ENST00000641756 GAGE4Q13068 117 aa12.75□□□□□ -0.37
PHGDH-226ENST00000641756 GAGE5Q13069 117 aa12.75□□□□□ -0.37
PHGDH-226ENST00000641756 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
PHGDH-226ENST00000641756 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
PHGDH-226ENST00000641756 CRLF1O75462 422 aa12.74□□□□□ -0.37
PHGDH-226ENST00000641756 LGALS3P17931 250 aaKnown RBP12.74□□□□□ -0.37
PHGDH-226ENST00000641756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-226ENST00000641756 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
PHGDH-226ENST00000641756 LEPROTO15243 131 aa12.73□□□□□ -0.37
PHGDH-226ENST00000641756 CRYBA4P53673 196 aa12.73□□□□□ -0.37
PHGDH-226ENST00000641756 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
PHGDH-226ENST00000641756 A0A0J9YY99 117 aa12.72□□□□□ -0.37
PHGDH-226ENST00000641756 GAGE10A6NGK3 116 aa12.72□□□□□ -0.37
PHGDH-226ENST00000641756 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
PHGDH-226ENST00000641756 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
PHGDH-226ENST00000641756 A0A1W2PPM0 123 aa12.71□□□□□ -0.37
PHGDH-226ENST00000641756 C12orf74Q32Q52 190 aa12.71□□□□□ -0.37
PHGDH-226ENST00000641756 C9orf66Q5T8R8 295 aa12.71□□□□□ -0.37
PHGDH-226ENST00000641756 VWFP04275 2813 aa12.71□□□□□ -0.37
PHGDH-226ENST00000641756 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.38
PHGDH-226ENST00000641756 LINC00694P0DN24 101 aa12.71□□□□□ -0.38
PHGDH-226ENST00000641756 UBE2D3P61077 147 aa12.71□□□□□ -0.38
PHGDH-226ENST00000641756 UBE2D2P62837 147 aa12.71□□□□□ -0.38
PHGDH-226ENST00000641756 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.38
PHGDH-226ENST00000641756 NTM-AS1Q6ZSK4 140 aa12.71□□□□□ -0.38
PHGDH-226ENST00000641756 INSL3P51460 131 aa12.7□□□□□ -0.38
PHGDH-226ENST00000641756 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms