RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SPXQ9BT56 116 aa12.26□□□□□ -0.45
PHGDH-223ENST00000641597 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
PHGDH-223ENST00000641597 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
PHGDH-223ENST00000641597 F8W1H4 67 aa12.26□□□□□ -0.45
PHGDH-223ENST00000641597 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
PHGDH-223ENST00000641597 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
PHGDH-223ENST00000641597 TMEM223A0PJW6 202 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 ZNF418Q8TF45 676 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-223ENST00000641597 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 VCX2Q9H322 139 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-223ENST00000641597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-223ENST00000641597 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-223ENST00000641597 H7C2G1 150 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 RHODO00212 210 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 RHOHQ15669 191 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 RNF152Q8N8N0 203 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 GTSF1LQ9H1H1 148 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
PHGDH-223ENST00000641597 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
PHGDH-223ENST00000641597 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
PHGDH-223ENST00000641597 TRAV2A0A0B4J234 112 aa12.24□□□□□ -0.45
PHGDH-223ENST00000641597 AZU1P20160 251 aa12.24□□□□□ -0.45
PHGDH-223ENST00000641597 C10orf126Q8N4M7 172 aa12.24□□□□□ -0.45
PHGDH-223ENST00000641597 XCL2Q9UBD3 114 aa12.24□□□□□ -0.45
PHGDH-223ENST00000641597 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
PHGDH-223ENST00000641597 LINC01587Q99440 93 aa12.23□□□□□ -0.45
PHGDH-223ENST00000641597 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
PHGDH-223ENST00000641597 A6NJY4 79 aa12.23□□□□□ -0.45
PHGDH-223ENST00000641597 A4D1N5 150 aa12.22□□□□□ -0.45
PHGDH-223ENST00000641597 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
PHGDH-223ENST00000641597 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
PHGDH-223ENST00000641597 DYNLRB2Q8TF09 96 aa12.22□□□□□ -0.45
PHGDH-223ENST00000641597 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
PHGDH-223ENST00000641597 TCL1BO95988 128 aa12.21□□□□□ -0.45
PHGDH-223ENST00000641597 KRTAP1-3Q8IUG1 177 aa12.21□□□□□ -0.46
PHGDH-223ENST00000641597 M0R2P5 195 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 DEFB114Q30KQ6 69 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 LEPROTO15243 131 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 UBE2D3P61077 147 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 NPC2P61916 151 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 UBE2D2P62837 147 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
PHGDH-223ENST00000641597 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
PHGDH-223ENST00000641597 WFDC11Q8NEX6 87 aa12.19□□□□□ -0.46
PHGDH-223ENST00000641597 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
PHGDH-223ENST00000641597 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
PHGDH-223ENST00000641597 Q6ZSV7 163 aa12.18□□□□□ -0.46
PHGDH-223ENST00000641597 Q6ZUT4 128 aa12.18□□□□□ -0.46
PHGDH-223ENST00000641597 C4orf3Q8WVX3 66 aa12.18□□□□□ -0.46
PHGDH-223ENST00000641597 SPINK8P0C7L1 97 aa12.18□□□□□ -0.46
PHGDH-223ENST00000641597 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
PHGDH-223ENST00000641597 Q8N2B8 174 aa12.18□□□□□ -0.46
PHGDH-223ENST00000641597 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
PHGDH-223ENST00000641597 ADAMTSL4-AS1Q5T5F5 129 aa12.17□□□□□ -0.46
PHGDH-223ENST00000641597 FN1P02751 2386 aaKnown RBP12.17□□□□□ -0.46
PHGDH-223ENST00000641597 PDZD2O15018 2839 aa12.17□□□□□ -0.46
PHGDH-223ENST00000641597 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
PHGDH-223ENST00000641597 PEMTQ9UBM1 199 aa12.17□□□□□ -0.46
PHGDH-223ENST00000641597 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 A8MTW9 85 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 PRO1854Q9UHT4 67 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 A8MWV9 139 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 NDUFA7O95182 113 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 TIMM21Q9BVV7 248 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
PHGDH-223ENST00000641597 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-223ENST00000641597 ESM1Q9NQ30 184 aa12.15□□□□□ -0.46
PHGDH-223ENST00000641597 TMEM238C9JI98 176 aa12.15□□□□□ -0.47
PHGDH-223ENST00000641597 SCGB1C2P0DMR2 95 aa12.15□□□□□ -0.47
PHGDH-223ENST00000641597 FHL3Q13643 280 aa12.15□□□□□ -0.47
PHGDH-223ENST00000641597 WFDC10AQ9H1F0 79 aa12.15□□□□□ -0.47
PHGDH-223ENST00000641597 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
PHGDH-223ENST00000641597 PRSS2P07478 247 aa12.14□□□□□ -0.47
PHGDH-223ENST00000641597 DAND5Q8N907 189 aa12.14□□□□□ -0.47
PHGDH-223ENST00000641597 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
PHGDH-223ENST00000641597 C1orf158Q8N1D5 194 aa12.13□□□□□ -0.47
PHGDH-223ENST00000641597 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
PHGDH-223ENST00000641597 LITAFQ99732 161 aa12.13□□□□□ -0.47
PHGDH-223ENST00000641597 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
PHGDH-223ENST00000641597 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
PHGDH-223ENST00000641597 INSP01308 110 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 FOXI1Q12951 378 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 TRGV1A0A0A0MS02 117 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 IGHV3-33P01772 117 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 LINC00694P0DN24 101 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 CARD19Q96LW7 228 aa12.12□□□□□ -0.47
PHGDH-223ENST00000641597 VWFP04275 2813 aa12.11□□□□□ -0.47
PHGDH-223ENST00000641597 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
PHGDH-223ENST00000641597 C1QTNF4Q9BXJ3 329 aa12.11□□□□□ -0.47
PHGDH-223ENST00000641597 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
PHGDH-223ENST00000641597 Q6ZTI0 123 aa12.11□□□□□ -0.47
PHGDH-223ENST00000641597 COX6A2Q02221 97 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms