RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 K7EP34 96 aa12.34□□□□□ -0.43
PHGDH-211ENST00000641213 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
PHGDH-211ENST00000641213 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
PHGDH-211ENST00000641213 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
PHGDH-211ENST00000641213 FAM104AQ969W3 186 aa12.34□□□□□ -0.43
PHGDH-211ENST00000641213 PYGO1Q9Y3Y4 419 aa12.34□□□□□ -0.43
PHGDH-211ENST00000641213 ADARB2-AS1A8MUL3 147 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 C12orf74Q32Q52 190 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 VCX2Q9H322 139 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 SMR3AQ99954 134 aa12.33□□□□□ -0.44
PHGDH-211ENST00000641213 FABP2P12104 132 aa12.32□□□□□ -0.44
PHGDH-211ENST00000641213 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
PHGDH-211ENST00000641213 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
PHGDH-211ENST00000641213 NDUFA7O95182 113 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 IGLV1-51P01701 117 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 CMC4P56277 68 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-211ENST00000641213 CHCHD7Q9BUK0 85 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 SPCS1Q9Y6A9 102 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 A0A0J9YXV3 536 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 TMEM223A0PJW6 202 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 AMELXQ99217 191 aa12.31□□□□□ -0.44
PHGDH-211ENST00000641213 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-211ENST00000641213 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
PHGDH-211ENST00000641213 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
PHGDH-211ENST00000641213 A0A0J9YY99 117 aa12.3□□□□□ -0.44
PHGDH-211ENST00000641213 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
PHGDH-211ENST00000641213 J3QQQ9 107 aa12.3□□□□□ -0.44
PHGDH-211ENST00000641213 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-211ENST00000641213 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
PHGDH-211ENST00000641213 IGLL5B9A064 214 aa12.29□□□□□ -0.44
PHGDH-211ENST00000641213 GIG44P09565 113 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-211ENST00000641213 CRYBA4P53673 196 aa12.29□□□□□ -0.44
PHGDH-211ENST00000641213 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
PHGDH-211ENST00000641213 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
PHGDH-211ENST00000641213 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
PHGDH-211ENST00000641213 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
PHGDH-211ENST00000641213 GCN1Q92616 2671 aaKnown RBP12.28□□□□□ -0.44
PHGDH-211ENST00000641213 LEPROTO15243 131 aa12.28□□□□□ -0.44
PHGDH-211ENST00000641213 OR5A1Q8NGJ0 315 aa12.28□□□□□ -0.44
PHGDH-211ENST00000641213 FAM110AQ9BQ89 295 aa12.28□□□□□ -0.44
PHGDH-211ENST00000641213 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
PHGDH-211ENST00000641213 JMJD1CQ15652 2540 aa12.27□□□□□ -0.44
PHGDH-211ENST00000641213 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.45
PHGDH-211ENST00000641213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-211ENST00000641213 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-211ENST00000641213 COTL1Q14019 142 aa12.26□□□□□ -0.45
PHGDH-211ENST00000641213 Q6ZTI0 123 aa12.26□□□□□ -0.45
PHGDH-211ENST00000641213 ZNF479Q96JC4 524 aa12.26□□□□□ -0.45
PHGDH-211ENST00000641213 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
PHGDH-211ENST00000641213 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
PHGDH-211ENST00000641213 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
PHGDH-211ENST00000641213 HIVEP2P31629 2446 aa12.25□□□□□ -0.45
PHGDH-211ENST00000641213 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
PHGDH-211ENST00000641213 SPANXB1Q9NS25 103 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-211ENST00000641213 IGHV3-64A0A075B6Q5 118 aa12.25□□□□□ -0.45
PHGDH-211ENST00000641213 LY6G6DO95868 133 aa12.25□□□□□ -0.45
PHGDH-211ENST00000641213 RPL35AP18077 110 aaKnown RBP12.25□□□□□ -0.45
PHGDH-211ENST00000641213 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
PHGDH-211ENST00000641213 TMEM238LA0A1B0GVL6 79 aa12.24□□□□□ -0.45
PHGDH-211ENST00000641213 A6NJY4 79 aa12.24□□□□□ -0.45
PHGDH-211ENST00000641213 RRN3P1Q2M238 152 aa12.24□□□□□ -0.45
PHGDH-211ENST00000641213 OCIAD2Q56VL3 154 aa12.24□□□□□ -0.45
PHGDH-211ENST00000641213 RBX1P62877 108 aa12.23□□□□□ -0.45
PHGDH-211ENST00000641213 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
PHGDH-211ENST00000641213 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
PHGDH-211ENST00000641213 UBE2D1P51668 147 aa12.23□□□□□ -0.45
PHGDH-211ENST00000641213 NOP10Q9NPE3 64 aaKnown RBP12.23□□□□□ -0.45
PHGDH-211ENST00000641213 PLAC8L1A1L4L8 177 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
PHGDH-211ENST00000641213 Q6ZUT4 128 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 K7EQD1 137 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 CSNK1G2-AS1Q8NCQ2 148 aa12.22□□□□□ -0.45
PHGDH-211ENST00000641213 C16orf74Q96GX8 76 aa12.21□□□□□ -0.45
PHGDH-211ENST00000641213 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
PHGDH-211ENST00000641213 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
PHGDH-211ENST00000641213 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
PHGDH-211ENST00000641213 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
PHGDH-211ENST00000641213 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
PHGDH-211ENST00000641213 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
PHGDH-211ENST00000641213 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
PHGDH-211ENST00000641213 PGPEP1Q9NXJ5 209 aa12.19□□□□□ -0.46
PHGDH-211ENST00000641213 HECTD1Q9ULT8 2610 aa12.19□□□□□ -0.46
PHGDH-211ENST00000641213 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
PHGDH-211ENST00000641213 APOMO95445 188 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 PF4P02776 101 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 UBE2D3P61077 147 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 UBE2D2P62837 147 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 CBY1Q9Y3M2 126 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
PHGDH-211ENST00000641213 OVOL2Q9BRP0 275 aa12.17□□□□□ -0.46
PHGDH-211ENST00000641213 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms