RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 VPREB3Q9UKI3 123 aa10.21□□□□□ -0.78
SCARB2-227ENST00000640957 I3L3M4 83 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 CD28P10747 220 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 NPFFO15130 113 aa10.2□□□□□ -0.78
SCARB2-227ENST00000640957 LEPROTO15243 131 aa10.19□□□□□ -0.78
SCARB2-227ENST00000640957 HOXD3P31249 432 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-227ENST00000640957 SPINK13Q1W4C9 94 aa10.19□□□□□ -0.78
SCARB2-227ENST00000640957 NDUFA12Q9UI09 145 aa10.19□□□□□ -0.78
SCARB2-227ENST00000640957 NXPH4O95158 308 aa10.19□□□□□ -0.78
SCARB2-227ENST00000640957 C9orf153Q5TBE3 101 aa10.19□□□□□ -0.78
SCARB2-227ENST00000640957 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 Q8N6K4 173 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 RHPN1-AS1Q9BWJ2 59 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-227ENST00000640957 IGKV2-29A2NJV5 120 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-227ENST00000640957 ITLN2Q8WWU7 325 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-227ENST00000640957 H3BUX3 64 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 UCNP55089 124 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 NSUN5P1Q3KNT7 163 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 HIST2H2BDQ6DRA6 164 aa10.18□□□□□ -0.78
SCARB2-227ENST00000640957 IGLV4-3A0A075B6K6 122 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 COX6CP09669 75 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 BLCAPP62952 87 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 MINOS1Q5TGZ0 78 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 POM121L12Q8N7R1 296 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 MINOS1-NBL1R4GNA1 71 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-227ENST00000640957 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 SYNJ2BPP57105 145 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
SCARB2-227ENST00000640957 HIVEP2P31629 2446 aa10.16□□□□□ -0.78
SCARB2-227ENST00000640957 LINC01587Q99440 93 aa10.16□□□□□ -0.78
SCARB2-227ENST00000640957 TIMM17AQ99595 171 aa10.16□□□□□ -0.78
SCARB2-227ENST00000640957 YAE1D1Q9NRH1 226 aa10.16□□□□□ -0.78
SCARB2-227ENST00000640957 NIPBLQ6KC79 2804 aaeCLIP10.15□□□□□ -0.78
SCARB2-227ENST00000640957 IGHV3-16A0A0C4DH30 117 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 Q9HAA7 133 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 IGHV1-69DA0A0B4J2H0 117 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 PRB1P04280 392 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 IGHV4-38-2P0DP08 117 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
SCARB2-227ENST00000640957 RHOHQ15669 191 aa10.15□□□□□ -0.79
SCARB2-227ENST00000640957 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.79
SCARB2-227ENST00000640957 M0QY20 66 aa10.14□□□□□ -0.79
SCARB2-227ENST00000640957 KHDC1LQ5JSQ8 128 aa10.14□□□□□ -0.79
SCARB2-227ENST00000640957 OVOL1O14753 267 aa10.14□□□□□ -0.79
SCARB2-227ENST00000640957 Q8N2B8 174 aa10.14□□□□□ -0.79
SCARB2-227ENST00000640957 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
SCARB2-227ENST00000640957 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 NDUFA7O95182 113 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 C11orf71Q6IPW1 123 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 TMEM190Q8WZ59 177 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 LITAFQ99732 161 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 FBN2P35556 2912 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 TRAV13-1A0A0B4J241 112 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 IGHV4-61A0A0C4DH41 118 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 TRBV7-1A0A0A6YYK4 115 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 PPP1R17O96001 155 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 GAGE2AQ6NT46 116 aa10.13□□□□□ -0.79
SCARB2-227ENST00000640957 FBXL19-AS1Q494R0 122 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 CCL19Q99731 98 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 FN1P02751 2386 aaKnown RBP10.12□□□□□ -0.79
SCARB2-227ENST00000640957 NF1P21359 2839 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 LMO4P61968 165 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 U3KQE9 123 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 TEX15Q9BXT5 2789 aa10.12□□□□□ -0.79
SCARB2-227ENST00000640957 IGHV4OR15-8A0A075B7B6 117 aa10.11□□□□□ -0.79
SCARB2-227ENST00000640957 A0A087WW49 117 aa10.11□□□□□ -0.79
SCARB2-227ENST00000640957 HERVK_113P63121 156 aa10.11□□□□□ -0.79
SCARB2-227ENST00000640957 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
SCARB2-227ENST00000640957 CYSTM1Q9H1C7 97 aa10.11□□□□□ -0.79
SCARB2-227ENST00000640957 MOB4Q9Y3A3 225 aa10.11□□□□□ -0.79
SCARB2-227ENST00000640957 IGKV3D-7A0A0C4DH55 119 aa10.1□□□□□ -0.79
SCARB2-227ENST00000640957 SOCS3O14543 225 aa10.1□□□□□ -0.79
SCARB2-227ENST00000640957 CDKN2A-AS1Q9UH64 79 aa10.1□□□□□ -0.79
SCARB2-227ENST00000640957 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
SCARB2-227ENST00000640957 LST1O00453 97 aa10.09□□□□□ -0.79
SCARB2-227ENST00000640957 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
SCARB2-227ENST00000640957 SDIM1Q6ZPB5 146 aa10.09□□□□□ -0.79
SCARB2-227ENST00000640957 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
SCARB2-227ENST00000640957 C5orf56Q8N8D9 126 aa10.09□□□□□ -0.79
SCARB2-227ENST00000640957 MRPL53Q96EL3 112 aaKnown RBP10.09□□□□□ -0.79
SCARB2-227ENST00000640957 DAZ1Q9NQZ3 744 aaKnown RBP10.09□□□□□ -0.79
SCARB2-227ENST00000640957 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
SCARB2-227ENST00000640957 Q6Q795 121 aa10.09□□□□□ -0.79
SCARB2-227ENST00000640957 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
SCARB2-227ENST00000640957 PIMREGQ9BSJ6 248 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 IGHV4-30-2A0A087WSY4 118 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 A0A087WVE0 104 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 EBI3Q14213 229 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms