RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 KRTAP10-3P60369 221 aa6□□□□□ -1.45
PNKP-231ENST00000640501 SCGB1D4Q6XE38 83 aa6□□□□□ -1.45
PNKP-231ENST00000640501 PCP2Q8IVA1 136 aa6□□□□□ -1.45
PNKP-231ENST00000640501 CSNK1G2-AS1Q8NCQ2 148 aa6□□□□□ -1.45
PNKP-231ENST00000640501 ZNRF2Q8NHG8 242 aa6□□□□□ -1.45
PNKP-231ENST00000640501 COX11Q9Y6N1 276 aa6□□□□□ -1.45
PNKP-231ENST00000640501 MTORP42345 2549 aa6□□□□□ -1.45
PNKP-231ENST00000640501 IGLV4-3A0A075B6K6 122 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 H3BRM9 83 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 UBE2L6O14933 153 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 P0DMU3 169 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 FAM231AP0DMU4 169 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 FAM231CP0DMU5 169 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 TCTAP57738 103 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 MRPS36P82909 103 aaKnown RBP5.99□□□□□ -1.45
PNKP-231ENST00000640501 Q6ZTI0 123 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 LINC00469Q8N7U9 141 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.99□□□□□ -1.45
PNKP-231ENST00000640501 PLEKHB2Q96CS7 222 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 TMEM101Q96IK0 257 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 HIST1H4GQ99525 98 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 GTSF1LQ9H1H1 148 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 NF1P21359 2839 aa5.99□□□□□ -1.45
PNKP-231ENST00000640501 SORL1Q92673 2214 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 WNK1Q9H4A3 2382 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 IGLV4-69A0A075B6H9 119 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 IGKV2D-26A0A0A0MRZ7 120 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GAGE12BA1L429 117 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 ZNF815PA8K554 130 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 LYRM9A8MSI8 78 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GAGE7O76087 117 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GAGE12FP0CL80 117 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GAGE12GP0CL81 117 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GAGE12IP0CL82 117 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 SMIM13P0DJ93 91 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GCSHP23434 173 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 ZNF479Q96JC4 524 aa5.98□□□□□ -1.45
PNKP-231ENST00000640501 GEMIN7Q9H840 131 aaKnown RBP5.98□□□□□ -1.45
PNKP-231ENST00000640501 CSDC2Q9Y534 153 aaKnown RBP5.98□□□□□ -1.45
PNKP-231ENST00000640501 NSD1Q96L73 2696 aaPredicted RBP5.97□□□□□ -1.45
PNKP-231ENST00000640501 TEX48A0A1B0GUV7 120 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 TINCRA0A1B0GVN0 87 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 LEPROTO15243 131 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 PRM2P04554 102 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 GIG44P09565 113 aaPredicted RBP5.97□□□□□ -1.45
PNKP-231ENST00000640501 VAMP3Q15836 100 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 AMMECR1LQ6DCA0 310 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 GTF2H5Q6ZYL4 71 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 CEND1Q8N111 149 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 WFDC9Q8NEX5 89 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 AMELXQ99217 191 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 TM2D2Q9BX73 214 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 WFDC10AQ9H1F0 79 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 UBE2D4Q9Y2X8 147 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 SETXQ7Z333 2677 aaKnown RBP5.97□□□□□ -1.45
PNKP-231ENST00000640501 OTOGQ6ZRI0 2925 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 NBPF19A0A087WUL8 3843 aa5.97□□□□□ -1.45
PNKP-231ENST00000640501 J3QQQ9 107 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 WIPF1O43516 503 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 UBE2D3P61077 147 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 UBE2D2P62837 147 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 SRSF9Q13242 221 aaKnown RBP eCLIP5.96□□□□□ -1.46
PNKP-231ENST00000640501 Q6ZSN1 163 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 SLC25A29Q8N8R3 303 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 OR5A1Q8NGJ0 315 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 PHLDA1Q8WV24 401 aaPredicted RBP5.96□□□□□ -1.46
PNKP-231ENST00000640501 TMEM243Q9BU79 118 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 CHCHD7Q9BUK0 85 aa5.96□□□□□ -1.46
PNKP-231ENST00000640501 TMEM223A0PJW6 202 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 GAGE12JA6NER3 117 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 TAX1BP3O14907 124 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 MIFP14174 115 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 HERVK_113P63121 156 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 GAGE4Q13068 117 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 GAGE5Q13069 117 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 UBE2V1Q13404 147 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 GAGE13Q4V321 117 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 DEFB104AQ8WTQ1 72 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 NACAE9PAV3 2078 aa5.95□□□□□ -1.46
PNKP-231ENST00000640501 ZNF469Q96JG9 3925 aaPredicted RBP5.94□□□□□ -1.46
PNKP-231ENST00000640501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.94□□□□□ -1.46
PNKP-231ENST00000640501 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 PLAC8L1A1L4L8 177 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 IGKV2-29A2NJV5 120 aaPredicted RBP5.94□□□□□ -1.46
PNKP-231ENST00000640501 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 TMEM238C9JI98 176 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 ZNF22P17026 224 aaPredicted RBP5.94□□□□□ -1.46
PNKP-231ENST00000640501 EMP1P54849 157 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 TIRAPP58753 221 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 LYRM7Q5U5X0 104 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 C3orf56Q8N813 242 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 SPANXB1Q9NS25 103 aaPredicted RBP5.94□□□□□ -1.46
PNKP-231ENST00000640501 TP73-AS1Q9UF72 201 aa5.94□□□□□ -1.46
PNKP-231ENST00000640501 SETD2Q9BYW2 2564 aaPredicted RBP5.94□□□□□ -1.46
PNKP-231ENST00000640501 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 DEFB130BP0DP73 79 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 DEFB130AP0DP74 79 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 FABP2P12104 132 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms