RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 XIRP2A4UGR9 3374 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 TEP1Q99973 2627 aaKnown RBP4.35□□□□□ -1.71
RTTN-218ENST00000640408 PROP1O75360 226 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 FUSP35637 526 aaKnown RBP eCLIP4.35□□□□□ -1.71
RTTN-218ENST00000640408 C20orf197Q8N268 126 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.35□□□□□ -1.71
RTTN-218ENST00000640408 CCL24O00175 119 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 RHOHQ15669 191 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 FANCD2OSQ96PS1 177 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 IGHV3-66A0A0C4DH42 116 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 SRRM4A7MD48 611 aaKnown RBP4.35□□□□□ -1.71
RTTN-218ENST00000640408 C1orf229Q6ZS94 237 aaPredicted RBP4.35□□□□□ -1.71
RTTN-218ENST00000640408 Q8N2B8 174 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 ZNF503Q96F45 646 aa4.35□□□□□ -1.71
RTTN-218ENST00000640408 RAI1Q7Z5J4 1906 aaPredicted RBP4.34□□□□□ -1.71
RTTN-218ENST00000640408 F8WDY8 70 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 G3V318 75 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 K7EMT4 169 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 IGHV3-23P01764 117 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 ERCC8Q13216 396 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 Q8TAT8 98 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 BAALCQ8WXS3 180 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 C11orf86A6NJI1 115 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 GPHB5Q86YW7 130 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 DYNAPQ8N1N2 210 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 THAP8Q8NA92 274 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 ITPR2Q14571 2701 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 TRAV12-2A0A075B6T6 113 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 A0A1W2PRX2 142 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 SIGLEC15Q6ZMC9 328 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 C4orf3Q8WVX3 66 aa4.34□□□□□ -1.71
RTTN-218ENST00000640408 EGR2P11161 476 aaPredicted RBP4.34□□□□□ -1.72
RTTN-218ENST00000640408 Q8N976 141 aa4.34□□□□□ -1.72
RTTN-218ENST00000640408 ZNF702PQ9H963 129 aa4.34□□□□□ -1.72
RTTN-218ENST00000640408 TRBV12-3P01733 135 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 C11orf44Q8N8P7 122 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 UPK3BQ9BT76 320 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 IGLV11-55A0A075B6I3 123 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 IGLV2-23P01705 113 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 SPATA3Q8NHX4 192 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 PRR25Q96S07 402 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 WT1-ASQ06250 92 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 KRTAP1-1Q07627 177 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 CLEC2BQ92478 149 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 TTTY13Q9BZ97 58 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 VCANP13611 3396 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 TRBV6-1A0A0K0K1D8 114 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 MRPS12O15235 138 aaKnown RBP4.33□□□□□ -1.72
RTTN-218ENST00000640408 PROK1P58294 105 aa4.33□□□□□ -1.72
RTTN-218ENST00000640408 RPL35AP18077 110 aaKnown RBP4.32□□□□□ -1.72
RTTN-218ENST00000640408 EIF4EBP1Q13541 118 aaPredicted RBP4.32□□□□□ -1.72
RTTN-218ENST00000640408 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 LAMA1P25391 3075 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 TRBV30A0A0K0K1B3 111 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 H3BRN7 92 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 S4R3C0 116 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 UBE2BP63146 152 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 ZNF491Q8N8L2 437 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 TANC2Q9HCD6 1990 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 FRYQ5TBA9 3013 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 TRAV23DV6A0A075B6W5 121 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 Q6ZPA2 131 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 KALRNO60229 2985 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 FRMD6-AS1P0C7T7 363 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 MP68P56378 58 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 SORL1Q92673 2214 aa4.32□□□□□ -1.72
RTTN-218ENST00000640408 IGHV3OR16-13A0A075B7E8 117 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 IGHV3-74A0A0B4J1X5 117 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 SDHAF1A6NFY7 115 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 F8WEM9 126 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 P0C879 139 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
RTTN-218ENST00000640408 TMEM61Q8N0U2 210 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
RTTN-218ENST00000640408 USP17L23D6RBM5 183 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 UBE2AP49459 152 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 LINC00205P59089 165 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 TPSG1Q9NRR2 321 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 EYSQ5T1H1 3165 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 TEX22C9J3V5 150 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 NXPH4O95158 308 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 HOXD3P31249 432 aaPredicted RBP4.31□□□□□ -1.72
RTTN-218ENST00000640408 IGHV3-35A0A0C4DH35 117 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 PDE6GP18545 87 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 ASPHD1Q5U4P2 390 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 SUMO4Q6EEV6 95 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 Q6JHZ5 121 aa4.31□□□□□ -1.72
RTTN-218ENST00000640408 IGHV3-49A0A0A0MS15 119 aa4.3□□□□□ -1.72
RTTN-218ENST00000640408 COX7A2LO14548 114 aa4.3□□□□□ -1.72
RTTN-218ENST00000640408 IGLV2-14P01704 120 aa4.3□□□□□ -1.72
RTTN-218ENST00000640408 C6orf226Q5I0X4 101 aa4.3□□□□□ -1.72
RTTN-218ENST00000640408 LINC01587Q99440 93 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms