RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 AMELXQ99217 191 aa13.74□□□□□ -0.21
CROCCP2-206ENST00000639594 VPS25Q9BRG1 176 aa13.74□□□□□ -0.21
CROCCP2-206ENST00000639594 LINC00467Q9BRT7 94 aa13.74□□□□□ -0.21
CROCCP2-206ENST00000639594 VCX2Q9H322 139 aa13.74□□□□□ -0.21
CROCCP2-206ENST00000639594 A0A0J9YXV3 536 aa13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 TMEM223A0PJW6 202 aa13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 FAM104AQ969W3 186 aa13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 SMR3AQ99954 134 aa13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 YAE1D1Q9NRH1 226 aa13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 MRPL16Q9NX20 251 aaKnown RBP13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 ZNF22P17026 224 aaPredicted RBP13.73□□□□□ -0.21
CROCCP2-206ENST00000639594 TEX29Q8N6K0 151 aa13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 XCL2Q9UBD3 114 aa13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 LGALS3P17931 250 aaKnown RBP13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 PCP4P48539 62 aa13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 UBE2D1P51668 147 aa13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 FHL3Q13643 280 aa13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
CROCCP2-206ENST00000639594 TMEM238LA0A1B0GVL6 79 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 A6NJY4 79 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 CCL24O00175 119 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 RHODO00212 210 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 LEPROTO15243 131 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 AZU1P20160 251 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 SPXQ9BT56 116 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 PYGO1Q9Y3Y4 419 aa13.71□□□□□ -0.21
CROCCP2-206ENST00000639594 FLNBO75369 2602 aaKnown RBP13.71□□□□□ -0.22
CROCCP2-206ENST00000639594 IGHV3-64A0A075B6Q5 118 aa13.71□□□□□ -0.22
CROCCP2-206ENST00000639594 SLC25A29Q8N8R3 303 aa13.71□□□□□ -0.22
CROCCP2-206ENST00000639594 SPANXB1Q9NS25 103 aaPredicted RBP13.71□□□□□ -0.22
CROCCP2-206ENST00000639594 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.22
CROCCP2-206ENST00000639594 TRAV25A0A0B4J276 109 aa13.7□□□□□ -0.22
CROCCP2-206ENST00000639594 BEAN1Q3B7T3 259 aa13.7□□□□□ -0.22
CROCCP2-206ENST00000639594 G3V4G9 280 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 H3BMG7 143 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 STHQ8IWL8 128 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 CLUHP3Q96NS8 147 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 CHCHD7Q9BUK0 85 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 IGHV3-30P01768 117 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 IGHV3-30-5P0DP03 117 aa13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
CROCCP2-206ENST00000639594 RS1O15537 224 aa13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 IGHV3-53P01767 116 aa13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 C21orf62-AS1Q17RA5 79 aa13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 RNASE13Q5GAN3 156 aaKnown RBP13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 IGHV3OR16-12A0A075B7B8 117 aa13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 APOMO95445 188 aa13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 C1orf158Q8N1D5 194 aa13.68□□□□□ -0.22
CROCCP2-206ENST00000639594 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
CROCCP2-206ENST00000639594 IGHV3-38A0A0C4DH36 116 aa13.67□□□□□ -0.22
CROCCP2-206ENST00000639594 WFDC2Q14508 124 aa13.66□□□□□ -0.22
CROCCP2-206ENST00000639594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.66□□□□□ -0.22
CROCCP2-206ENST00000639594 IGKV2-29A2NJV5 120 aaPredicted RBP13.66□□□□□ -0.22
CROCCP2-206ENST00000639594 SETD2Q9BYW2 2564 aaPredicted RBP13.66□□□□□ -0.22
CROCCP2-206ENST00000639594 F8W1H4 67 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 TSPAN13O95857 204 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 RPL24P83731 157 aaKnown RBP13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 UBE2D4Q9Y2X8 147 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 HIVEP1P15822 2718 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 CRYBA4P53673 196 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 MRPS36P82909 103 aaKnown RBP13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 DNAJC30Q96LL9 226 aa13.65□□□□□ -0.22
CROCCP2-206ENST00000639594 LINC01006Q8NI28 216 aa13.64□□□□□ -0.23
CROCCP2-206ENST00000639594 TEX48A0A1B0GUV7 120 aa13.64□□□□□ -0.23
CROCCP2-206ENST00000639594 CFC1BP0CG36 223 aa13.64□□□□□ -0.23
CROCCP2-206ENST00000639594 CFC1P0CG37 223 aa13.64□□□□□ -0.23
CROCCP2-206ENST00000639594 MTURNQ8N3F0 131 aa13.64□□□□□ -0.23
CROCCP2-206ENST00000639594 TSSC4Q9Y5U2 329 aaPredicted RBP13.64□□□□□ -0.23
CROCCP2-206ENST00000639594 SFTA2Q6UW10 78 aa13.63□□□□□ -0.23
CROCCP2-206ENST00000639594 IL17DQ8TAD2 202 aa13.63□□□□□ -0.23
CROCCP2-206ENST00000639594 SPANXA1Q9NS26 97 aa13.63□□□□□ -0.23
CROCCP2-206ENST00000639594 LY6G6DO95868 133 aa13.62□□□□□ -0.23
CROCCP2-206ENST00000639594 IGHV3-30-3P0DP02 117 aa13.62□□□□□ -0.23
CROCCP2-206ENST00000639594 COTL1Q14019 142 aa13.62□□□□□ -0.23
CROCCP2-206ENST00000639594 GAGE13Q4V321 117 aa13.62□□□□□ -0.23
CROCCP2-206ENST00000639594 PRO0461Q9UI25 63 aa13.62□□□□□ -0.23
CROCCP2-206ENST00000639594 TRGV1A0A0A0MS02 117 aa13.61□□□□□ -0.23
CROCCP2-206ENST00000639594 TRAV8-3A0A0A6YYJ7 113 aa13.61□□□□□ -0.23
CROCCP2-206ENST00000639594 Q6ZUT4 128 aa13.61□□□□□ -0.23
CROCCP2-206ENST00000639594 C10orf126Q8N4M7 172 aa13.61□□□□□ -0.23
CROCCP2-206ENST00000639594 NSD1Q96L73 2696 aaPredicted RBP13.61□□□□□ -0.23
CROCCP2-206ENST00000639594 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
CROCCP2-206ENST00000639594 LOC107984156A0A0G2JMH3 177 aa13.6□□□□□ -0.23
CROCCP2-206ENST00000639594 ARL17AQ8IVW1 177 aa13.6□□□□□ -0.23
CROCCP2-206ENST00000639594 C16orf95Q9H693 158 aa13.6□□□□□ -0.23
CROCCP2-206ENST00000639594 RNASE1P07998 156 aaKnown RBP13.59□□□□□ -0.23
CROCCP2-206ENST00000639594 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
CROCCP2-206ENST00000639594 ADARB2-AS1A8MUL3 147 aa13.59□□□□□ -0.23
CROCCP2-206ENST00000639594 SH2D6Q7Z4S9 175 aa13.59□□□□□ -0.23
CROCCP2-206ENST00000639594 A0A0J9YXY3 114 aa13.58□□□□□ -0.24
CROCCP2-206ENST00000639594 UBE2D3P61077 147 aa13.58□□□□□ -0.24
CROCCP2-206ENST00000639594 UBE2D2P62837 147 aa13.58□□□□□ -0.24
CROCCP2-206ENST00000639594 A4D1N5 150 aa13.58□□□□□ -0.24
CROCCP2-206ENST00000639594 Q6ZTI0 123 aa13.58□□□□□ -0.24
CROCCP2-206ENST00000639594 SETXQ7Z333 2677 aaKnown RBP13.57□□□□□ -0.24
CROCCP2-206ENST00000639594 IGHV1-58A0A0C4DH39 117 aa13.57□□□□□ -0.24
CROCCP2-206ENST00000639594 EIF4EBP3O60516 100 aaPredicted RBP13.57□□□□□ -0.24
CROCCP2-206ENST00000639594 PSMB2P49721 201 aa13.57□□□□□ -0.24
CROCCP2-206ENST00000639594 ETDBQ3ZM63 59 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms