RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ICOSQ9Y6W8 199 aa7.97□□□□□ -1.13
SNIP1-204ENST00000638725 Q6ZSN1 163 aa7.97□□□□□ -1.13
SNIP1-204ENST00000638725 CRYBG3Q68DQ2 2970 aa7.97□□□□□ -1.13
SNIP1-204ENST00000638725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.96□□□□□ -1.13
SNIP1-204ENST00000638725 IGKV2-29A2NJV5 120 aaPredicted RBP7.96□□□□□ -1.13
SNIP1-204ENST00000638725 VSIG2Q96IQ7 327 aa7.96□□□□□ -1.13
SNIP1-204ENST00000638725 CHCHD7Q9BUK0 85 aa7.96□□□□□ -1.13
SNIP1-204ENST00000638725 SPANXDQ9BXN6 97 aa7.96□□□□□ -1.13
SNIP1-204ENST00000638725 SPANXCQ9NY87 97 aa7.96□□□□□ -1.13
SNIP1-204ENST00000638725 H3BMM0 161 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 SNCGO76070 127 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 MIAQ16674 131 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 UBE2WQ96B02 151 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 EDA2RQ9HAV5 297 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 UBE2D4Q9Y2X8 147 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 SPG11Q96JI7 2443 aa7.96□□□□□ -1.14
SNIP1-204ENST00000638725 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
SNIP1-204ENST00000638725 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
SNIP1-204ENST00000638725 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 CLEC2BQ92478 149 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 NACAE9PAV3 2078 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 IGHV3-38A0A0C4DH36 116 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 H7C423 109 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
SNIP1-204ENST00000638725 DEFB131AP59861 70 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 RNF152Q8N8N0 203 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 LINC01600Q96MT4 127 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
SNIP1-204ENST00000638725 RBMY1BA6NDE4 496 aaKnown RBP7.94□□□□□ -1.14
SNIP1-204ENST00000638725 RBMY1EA6NEQ0 496 aaKnown RBP7.94□□□□□ -1.14
SNIP1-204ENST00000638725 B4DSR2 109 aa7.94□□□□□ -1.14
SNIP1-204ENST00000638725 RBMY1DP0C7P1 496 aaKnown RBP7.94□□□□□ -1.14
SNIP1-204ENST00000638725 DAND5Q8N907 189 aa7.94□□□□□ -1.14
SNIP1-204ENST00000638725 DUX3Q96PT4 197 aa7.94□□□□□ -1.14
SNIP1-204ENST00000638725 MAP1AP78559 2803 aaPredicted RBP7.94□□□□□ -1.14
SNIP1-204ENST00000638725 LINC00467Q9BRT7 94 aa7.94□□□□□ -1.14
SNIP1-204ENST00000638725 NCOR2Q9Y618 2525 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 TMEM61Q8N0U2 210 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 SPANXA1Q9NS26 97 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 TMEM89A2RUT3 159 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 COX6CP09669 75 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
SNIP1-204ENST00000638725 DEFB136Q30KP8 78 aa7.92□□□□□ -1.14
SNIP1-204ENST00000638725 NRGNQ92686 78 aa7.92□□□□□ -1.14
SNIP1-204ENST00000638725 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
SNIP1-204ENST00000638725 CELSR2Q9HCU4 2923 aa7.92□□□□□ -1.14
SNIP1-204ENST00000638725 SLURP1P55000 103 aa7.92□□□□□ -1.14
SNIP1-204ENST00000638725 NDUFV3P56181 108 aaKnown RBP7.92□□□□□ -1.14
SNIP1-204ENST00000638725 C18orf65Q6ZTR6 163 aa7.92□□□□□ -1.14
SNIP1-204ENST00000638725 H3BT86 120 aa7.91□□□□□ -1.14
SNIP1-204ENST00000638725 ZNF415Q09FC8 603 aa7.91□□□□□ -1.14
SNIP1-204ENST00000638725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
SNIP1-204ENST00000638725 CHD8Q9HCK8 2581 aa7.91□□□□□ -1.14
SNIP1-204ENST00000638725 LST1O00453 97 aa7.91□□□□□ -1.14
SNIP1-204ENST00000638725 GAGE5Q13069 117 aa7.91□□□□□ -1.14
SNIP1-204ENST00000638725 GAGE6Q13070 117 aa7.91□□□□□ -1.14
SNIP1-204ENST00000638725 B5MCH6 92 aa7.9□□□□□ -1.14
SNIP1-204ENST00000638725 TTC32Q5I0X7 151 aa7.9□□□□□ -1.14
SNIP1-204ENST00000638725 MAPK1IP1LQ8NDC0 245 aa7.9□□□□□ -1.14
SNIP1-204ENST00000638725 YAE1D1Q9NRH1 226 aa7.9□□□□□ -1.14
SNIP1-204ENST00000638725 CREBBPQ92793 2442 aa7.9□□□□□ -1.14
SNIP1-204ENST00000638725 TMEM101Q96IK0 257 aa7.9□□□□□ -1.15
SNIP1-204ENST00000638725 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 ZNF702PQ9H963 129 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 SPTBN4Q9H254 2564 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 A8MTW9 85 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 TIMM17BO60830 172 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 IFITM1P13164 125 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 COX6A2Q02221 97 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 ZNF625Q96I27 306 aaPredicted RBP7.89□□□□□ -1.15
SNIP1-204ENST00000638725 LINC01587Q99440 93 aa7.89□□□□□ -1.15
SNIP1-204ENST00000638725 NDUFA1O15239 70 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 Q6Q795 121 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 C11orf72Q8NBR9 251 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 CITED2Q99967 270 aaPredicted RBP7.88□□□□□ -1.15
SNIP1-204ENST00000638725 PRORYQ9H606 182 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 CSMD2Q7Z408 3487 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 VPREB3Q9UKI3 123 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 DGAT2L7PQ6IED9 249 aa7.88□□□□□ -1.15
SNIP1-204ENST00000638725 IGHV3OR16-12A0A075B7B8 117 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 TIRAPP58753 221 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 PIK3CD-AS1Q5SR53 167 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 LINC01356Q8N9X3 169 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 Q9H8V8 135 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 ITPR1Q14643 2758 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 LINC00308Q8TCZ7 52 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 DNAJC30Q96LL9 226 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 MAP6D1Q9H9H5 199 aa7.87□□□□□ -1.15
SNIP1-204ENST00000638725 NDUFA7O95182 113 aa7.86□□□□□ -1.15
SNIP1-204ENST00000638725 HIST2H2BDQ6DRA6 164 aa7.86□□□□□ -1.15
SNIP1-204ENST00000638725 LINC00242Q5T6M2 205 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms