RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 TRGV2A0A075B6R0 118 aa11.85□□□□□ -0.51
HCG27-205ENST00000638546 IGKV2D-26A0A0A0MRZ7 120 aa11.85□□□□□ -0.51
HCG27-205ENST00000638546 K7EQD1 137 aa11.85□□□□□ -0.51
HCG27-205ENST00000638546 SIVA1O15304 175 aa11.85□□□□□ -0.51
HCG27-205ENST00000638546 COL5A1-AS1Q5SY13 56 aa11.85□□□□□ -0.51
HCG27-205ENST00000638546 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
HCG27-205ENST00000638546 SMIM9A6NGZ8 99 aa11.84□□□□□ -0.51
HCG27-205ENST00000638546 COTL1Q14019 142 aa11.84□□□□□ -0.51
HCG27-205ENST00000638546 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
HCG27-205ENST00000638546 KIR2DL5BQ8NHK3 375 aa11.84□□□□□ -0.51
HCG27-205ENST00000638546 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
HCG27-205ENST00000638546 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
HCG27-205ENST00000638546 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
HCG27-205ENST00000638546 C12orf54Q6X4T0 127 aa11.83□□□□□ -0.52
HCG27-205ENST00000638546 PHLDA1Q8WV24 401 aaPredicted RBP11.83□□□□□ -0.52
HCG27-205ENST00000638546 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
HCG27-205ENST00000638546 CHCHD7Q9BUK0 85 aa11.83□□□□□ -0.52
HCG27-205ENST00000638546 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 IGHV3-38A0A0C4DH36 116 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 APOC4P55056 127 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 TMEM97Q5BJF2 176 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
HCG27-205ENST00000638546 NACAE9PAV3 2078 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 NPSP0C0P6 89 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 MPV17L2Q567V2 206 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 SLC25A29Q8N8R3 303 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 VCX2Q9H322 139 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 X6R8D5 127 aa11.82□□□□□ -0.52
HCG27-205ENST00000638546 EMP1P54849 157 aa11.81□□□□□ -0.52
HCG27-205ENST00000638546 SPANXA1Q9NS26 97 aa11.81□□□□□ -0.52
HCG27-205ENST00000638546 FBN1P35555 2871 aaKnown RBP11.8□□□□□ -0.52
HCG27-205ENST00000638546 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
HCG27-205ENST00000638546 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
HCG27-205ENST00000638546 CRYBA4P53673 196 aa11.8□□□□□ -0.52
HCG27-205ENST00000638546 BVES-AS1Q5T3Y7 98 aa11.8□□□□□ -0.52
HCG27-205ENST00000638546 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
HCG27-205ENST00000638546 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
HCG27-205ENST00000638546 UBE2D3P61077 147 aa11.79□□□□□ -0.52
HCG27-205ENST00000638546 UBE2D2P62837 147 aa11.79□□□□□ -0.52
HCG27-205ENST00000638546 ZMAT5Q9UDW3 170 aaKnown RBP11.79□□□□□ -0.52
HCG27-205ENST00000638546 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 E9PLD3 99 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 GAGE1Q13065 139 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 GAGE4Q13068 117 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 GAGE5Q13069 117 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 LINC00612Q8N6U2 182 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 C3orf56Q8N813 242 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 HIGD1BQ9P298 99 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 TENM1Q9UKZ4 2725 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.78□□□□□ -0.52
HCG27-205ENST00000638546 TRAV8-6A0A0B4J262 113 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
HCG27-205ENST00000638546 HERVK_113P61574 105 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 FHL2Q14192 279 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 OR11H2Q8NH07 326 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 AMELXQ99217 191 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 TTTY13Q9BZ97 58 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
HCG27-205ENST00000638546 HSD52Q0P140 79 aa11.77□□□□□ -0.53
HCG27-205ENST00000638546 MAPKAPK5-AS1Q8N8E1 139 aa11.77□□□□□ -0.53
HCG27-205ENST00000638546 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
HCG27-205ENST00000638546 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
HCG27-205ENST00000638546 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
HCG27-205ENST00000638546 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
HCG27-205ENST00000638546 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
HCG27-205ENST00000638546 CEMP1Q6PRD7 247 aaPredicted RBP11.75□□□□□ -0.53
HCG27-205ENST00000638546 DNHD1Q96M86 4753 aa11.75□□□□□ -0.53
HCG27-205ENST00000638546 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
HCG27-205ENST00000638546 TMEM170BQ5T4T1 132 aa11.75□□□□□ -0.53
HCG27-205ENST00000638546 CHAC1Q9BUX1 264 aa11.75□□□□□ -0.53
HCG27-205ENST00000638546 VWFP04275 2813 aa11.74□□□□□ -0.53
HCG27-205ENST00000638546 TRBV25-1A0A075B6N4 114 aa11.74□□□□□ -0.53
HCG27-205ENST00000638546 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
HCG27-205ENST00000638546 LYRM9A8MSI8 78 aa11.74□□□□□ -0.53
HCG27-205ENST00000638546 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
HCG27-205ENST00000638546 MRPS36P82909 103 aaKnown RBP11.74□□□□□ -0.53
HCG27-205ENST00000638546 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
HCG27-205ENST00000638546 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
HCG27-205ENST00000638546 MDFIQ99750 246 aa11.73□□□□□ -0.53
HCG27-205ENST00000638546 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
HCG27-205ENST00000638546 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
HCG27-205ENST00000638546 SEC11AP67812 179 aa11.72□□□□□ -0.53
HCG27-205ENST00000638546 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
HCG27-205ENST00000638546 DGAT2L7PQ6IED9 249 aa11.72□□□□□ -0.53
HCG27-205ENST00000638546 ORAOV1Q8WV07 137 aa11.72□□□□□ -0.53
HCG27-205ENST00000638546 ZNF25P17030 456 aaPredicted RBP11.71□□□□□ -0.53
HCG27-205ENST00000638546 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.53
HCG27-205ENST00000638546 Q6ZUT4 128 aa11.71□□□□□ -0.53
HCG27-205ENST00000638546 SBSPONQ8IVN8 264 aa11.71□□□□□ -0.53
HCG27-205ENST00000638546 COL6A5A8TX70 2615 aa11.71□□□□□ -0.53
HCG27-205ENST00000638546 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.54
HCG27-205ENST00000638546 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms