RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
CAPN3-221ENST00000638141 C22orf34Q6ZV56 151 aa8.89□□□□□ -0.99
CAPN3-221ENST00000638141 IGHV3-64A0A075B6Q5 118 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 PSMB8P28062 276 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 BSPH1Q075Z2 132 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 RELNP78509 3460 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 BAALC-AS2P0C853 105 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 C15orf32Q32M92 178 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 Q6ZSV7 163 aa8.88□□□□□ -0.99
CAPN3-221ENST00000638141 VMO1Q7Z5L0 202 aa8.87□□□□□ -0.99
CAPN3-221ENST00000638141 VSIG2Q96IQ7 327 aa8.87□□□□□ -0.99
CAPN3-221ENST00000638141 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
CAPN3-221ENST00000638141 IGHV7-81A0A0B4J1V7 117 aa8.87□□□□□ -0.99
CAPN3-221ENST00000638141 COPS9Q8WXC6 57 aa8.87□□□□□ -0.99
CAPN3-221ENST00000638141 MINOS1Q5TGZ0 78 aa8.86□□□□□ -0.99
CAPN3-221ENST00000638141 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-221ENST00000638141 MINOS1-NBL1R4GNA1 71 aa8.86□□□□□ -0.99
CAPN3-221ENST00000638141 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-221ENST00000638141 SYNJ2BPP57105 145 aa8.86□□□□□ -0.99
CAPN3-221ENST00000638141 IGFL3Q6UXB1 125 aa8.86□□□□□ -0.99
CAPN3-221ENST00000638141 BAHCC1Q9P281 2608 aa8.86□□□□□ -0.99
CAPN3-221ENST00000638141 COL6A6A6NMZ7 2263 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
CAPN3-221ENST00000638141 NBASA2RRP1 2371 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 J3QLI3 93 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 IGF1P05019 195 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 PFN2P35080 140 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 FAM208BQ5VWN6 2430 aa8.85□□□□□ -0.99
CAPN3-221ENST00000638141 IGHV3OR16-8A0A075B7F1 116 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 GNRH2O43555 120 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 NPC2P61916 151 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 C20orf173Q96LM9 149 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 M0QY20 66 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 SOCS3O14543 225 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 PRB3Q04118 309 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-221ENST00000638141 BBC3Q96PG8 261 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-221ENST00000638141 C1orf43Q9BWL3 253 aa8.84□□□□□ -0.99
CAPN3-221ENST00000638141 IGHV3-66A0A0C4DH42 116 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 NDUFA1O15239 70 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 OVOL2Q9BRP0 275 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 NACAE9PAV3 2078 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 IGHV3-35A0A0C4DH35 117 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 KLRB1Q12918 225 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 PRIMA1Q86XR5 153 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 OBSCN-AS1Q96MR7 158 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
CAPN3-221ENST00000638141 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
CAPN3-221ENST00000638141 F5H697 171 aa8.82□□□□□ -1
CAPN3-221ENST00000638141 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
CAPN3-221ENST00000638141 CLEC19AQ6UXS0 136 aa8.82□□□□□ -1
CAPN3-221ENST00000638141 Q8N9W7 124 aa8.82□□□□□ -1
CAPN3-221ENST00000638141 Q8NA96 180 aa8.82□□□□□ -1
CAPN3-221ENST00000638141 KLLNB2CW77 178 aa8.81□□□□□ -1
CAPN3-221ENST00000638141 E7EQL1 145 aa8.81□□□□□ -1
CAPN3-221ENST00000638141 DNAL4O96015 105 aa8.81□□□□□ -1
CAPN3-221ENST00000638141 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
CAPN3-221ENST00000638141 FAM104AQ969W3 186 aa8.81□□□□□ -1
CAPN3-221ENST00000638141 C9orf85Q96MD7 179 aa8.81□□□□□ -1
CAPN3-221ENST00000638141 PRB1P04280 392 aa8.8□□□□□ -1
CAPN3-221ENST00000638141 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
CAPN3-221ENST00000638141 FHL2Q14192 279 aa8.8□□□□□ -1
CAPN3-221ENST00000638141 UBE2D4Q9Y2X8 147 aa8.8□□□□□ -1
CAPN3-221ENST00000638141 FAM223BA6NKX1 122 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 CD28P10747 220 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 FAM223AQ8IWN6 122 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 ZNF462Q96JM2 2506 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 A0A087WWL8 130 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 TRAV12-3A0A0B4J271 114 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 FAM236CP0DP71 79 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 Q8N2B8 174 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 C10orf105Q8TEF2 133 aa8.79□□□□□ -1
CAPN3-221ENST00000638141 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
CAPN3-221ENST00000638141 IGHV3OR16-13A0A075B7E8 117 aa8.78□□□□□ -1
CAPN3-221ENST00000638141 IGHV3-74A0A0B4J1X5 117 aa8.78□□□□□ -1
CAPN3-221ENST00000638141 NDUFA4O00483 81 aa8.78□□□□□ -1
CAPN3-221ENST00000638141 BCE1O60756 84 aa8.78□□□□□ -1
CAPN3-221ENST00000638141 ECSCRQ19T08 205 aa8.78□□□□□ -1
CAPN3-221ENST00000638141 ATP6V0E1O15342 81 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 TMEM86BQ8N661 226 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 COL12A1Q99715 3063 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 IGHG2P01859 326 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 RPL28P46779 137 aaKnown RBP8.77□□□□□ -1.01
CAPN3-221ENST00000638141 FAM218AQ96MZ4 157 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
CAPN3-221ENST00000638141 IGHV3-49A0A0A0MS15 119 aa8.76□□□□□ -1.01
CAPN3-221ENST00000638141 S100A7L2Q5SY68 101 aa8.76□□□□□ -1.01
CAPN3-221ENST00000638141 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
CAPN3-221ENST00000638141 HIST2H2BCQ6DN03 193 aa8.75□□□□□ -1.01
CAPN3-221ENST00000638141 HIST2H2BDQ6DRA6 164 aa8.75□□□□□ -1.01
CAPN3-221ENST00000638141 FLNCQ14315 2725 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms