RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 NIPBLQ6KC79 2804 aaeCLIP13.38□□□□□ -0.27
CTSD-212ENST00000637815 NDUFA7O95182 113 aa13.38□□□□□ -0.27
CTSD-212ENST00000637815 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
CTSD-212ENST00000637815 A0A1B0GWB2 263 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 GAGE12BA1L429 117 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 CRYBA4P53673 196 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 FAM104AQ969W3 186 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 PLEKHB2Q96CS7 222 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 VCX2Q9H322 139 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 ADARB2-AS1A8MUL3 147 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 FABP2P12104 132 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 C12orf74Q32Q52 190 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 RNASE8Q8TDE3 154 aaKnown RBP13.37□□□□□ -0.27
CTSD-212ENST00000637815 FAM110AQ9BQ89 295 aa13.37□□□□□ -0.27
CTSD-212ENST00000637815 SAP30O75446 220 aa13.36□□□□□ -0.27
CTSD-212ENST00000637815 SCGB1D4Q6XE38 83 aa13.36□□□□□ -0.27
CTSD-212ENST00000637815 AMELXQ99217 191 aa13.36□□□□□ -0.27
CTSD-212ENST00000637815 IGLV1-51P01701 117 aa13.35□□□□□ -0.27
CTSD-212ENST00000637815 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
CTSD-212ENST00000637815 SPCS1Q9Y6A9 102 aa13.35□□□□□ -0.27
CTSD-212ENST00000637815 FASNP49327 2511 aaKnown RBP13.35□□□□□ -0.27
CTSD-212ENST00000637815 TMEM223A0PJW6 202 aa13.35□□□□□ -0.27
CTSD-212ENST00000637815 OR5A1Q8NGJ0 315 aa13.35□□□□□ -0.27
CTSD-212ENST00000637815 A0A0J9YY99 117 aa13.34□□□□□ -0.27
CTSD-212ENST00000637815 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
CTSD-212ENST00000637815 JMJD1CQ15652 2540 aa13.34□□□□□ -0.27
CTSD-212ENST00000637815 IGHV3OR16-12A0A075B7B8 117 aa13.34□□□□□ -0.27
CTSD-212ENST00000637815 J3QQQ9 107 aa13.34□□□□□ -0.27
CTSD-212ENST00000637815 FOSL1P15407 271 aa13.34□□□□□ -0.27
CTSD-212ENST00000637815 IGLL5B9A064 214 aa13.33□□□□□ -0.28
CTSD-212ENST00000637815 TMEM263Q8WUH6 116 aaKnown RBP13.33□□□□□ -0.28
CTSD-212ENST00000637815 SPANXA1Q9NS26 97 aa13.33□□□□□ -0.28
CTSD-212ENST00000637815 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
CTSD-212ENST00000637815 LEPROTO15243 131 aa13.32□□□□□ -0.28
CTSD-212ENST00000637815 GIG44P09565 113 aaPredicted RBP13.32□□□□□ -0.28
CTSD-212ENST00000637815 C19orf73Q9NVV2 129 aa13.32□□□□□ -0.28
CTSD-212ENST00000637815 HIVEP2P31629 2446 aa13.32□□□□□ -0.28
CTSD-212ENST00000637815 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
CTSD-212ENST00000637815 UBE2D4Q9Y2X8 147 aa13.32□□□□□ -0.28
CTSD-212ENST00000637815 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
CTSD-212ENST00000637815 MRPS36P82909 103 aaKnown RBP13.31□□□□□ -0.28
CTSD-212ENST00000637815 GCN1Q92616 2671 aaKnown RBP13.31□□□□□ -0.28
CTSD-212ENST00000637815 TMEM238LA0A1B0GVL6 79 aa13.3□□□□□ -0.28
CTSD-212ENST00000637815 A6NJY4 79 aa13.3□□□□□ -0.28
CTSD-212ENST00000637815 LGALS3P17931 250 aaKnown RBP13.3□□□□□ -0.28
CTSD-212ENST00000637815 SRSF9Q13242 221 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTSD-212ENST00000637815 COTL1Q14019 142 aa13.3□□□□□ -0.28
CTSD-212ENST00000637815 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
CTSD-212ENST00000637815 SLC25A29Q8N8R3 303 aa13.3□□□□□ -0.28
CTSD-212ENST00000637815 ZNF479Q96JC4 524 aa13.3□□□□□ -0.28
CTSD-212ENST00000637815 SMR3AQ99954 134 aa13.3□□□□□ -0.28
CTSD-212ENST00000637815 UBE2D1P51668 147 aa13.29□□□□□ -0.28
CTSD-212ENST00000637815 RBX1P62877 108 aa13.29□□□□□ -0.28
CTSD-212ENST00000637815 RRN3P1Q2M238 152 aa13.29□□□□□ -0.28
CTSD-212ENST00000637815 OCIAD2Q56VL3 154 aa13.29□□□□□ -0.28
CTSD-212ENST00000637815 WFDC10AQ9H1F0 79 aa13.29□□□□□ -0.28
CTSD-212ENST00000637815 NOTCH3Q9UM47 2321 aa13.28□□□□□ -0.28
CTSD-212ENST00000637815 IGHV3-38A0A0C4DH36 116 aa13.28□□□□□ -0.28
CTSD-212ENST00000637815 Q6ZTI0 123 aa13.28□□□□□ -0.28
CTSD-212ENST00000637815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.27□□□□□ -0.28
CTSD-212ENST00000637815 TRAV4A0A0B4J268 109 aa13.27□□□□□ -0.28
CTSD-212ENST00000637815 IGKV2-29A2NJV5 120 aaPredicted RBP13.27□□□□□ -0.28
CTSD-212ENST00000637815 DAZ2Q13117 558 aaKnown RBP13.27□□□□□ -0.28
CTSD-212ENST00000637815 TRBV10-1A0A0K0K1A3 114 aa13.27□□□□□ -0.29
CTSD-212ENST00000637815 IGHV3-30P01768 117 aa13.26□□□□□ -0.29
CTSD-212ENST00000637815 IGHV3-30-5P0DP03 117 aa13.26□□□□□ -0.29
CTSD-212ENST00000637815 TINCRA0A1B0GVN0 87 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 NDUFA11Q86Y39 141 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 TIMM21Q9BVV7 248 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 C1QTNF4Q9BXJ3 329 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 PLAC8L1A1L4L8 177 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 K7EQD1 137 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
CTSD-212ENST00000637815 Q6ZUT4 128 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
CTSD-212ENST00000637815 KRTAP10-3P60369 221 aa13.24□□□□□ -0.29
CTSD-212ENST00000637815 NOP10Q9NPE3 64 aaKnown RBP13.24□□□□□ -0.29
CTSD-212ENST00000637815 LY6G6DO95868 133 aa13.23□□□□□ -0.29
CTSD-212ENST00000637815 RPL35AP18077 110 aaKnown RBP13.23□□□□□ -0.29
CTSD-212ENST00000637815 IGHV3-64A0A075B6Q5 118 aa13.23□□□□□ -0.29
CTSD-212ENST00000637815 IGHV3-30-3P0DP02 117 aa13.23□□□□□ -0.29
CTSD-212ENST00000637815 RPL36AP83881 106 aaKnown RBP13.23□□□□□ -0.29
CTSD-212ENST00000637815 RPL36ALQ969Q0 106 aaKnown RBP13.23□□□□□ -0.29
CTSD-212ENST00000637815 HECTD1Q9ULT8 2610 aa13.22□□□□□ -0.29
CTSD-212ENST00000637815 CBY1Q9Y3M2 126 aa13.22□□□□□ -0.29
CTSD-212ENST00000637815 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
CTSD-212ENST00000637815 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
CTSD-212ENST00000637815 PGPEP1Q9NXJ5 209 aa13.22□□□□□ -0.29
CTSD-212ENST00000637815 OTOGQ6ZRI0 2925 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 K7ERU9 68 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 UBE2D3P61077 147 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 UBE2D2P62837 147 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 C10orf126Q8N4M7 172 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 OVOL2Q9BRP0 275 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
CTSD-212ENST00000637815 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 CIDEAO60543 219 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms