RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-222ENST00000637226 CCDC32Q9BV29 185 aa-2.13□□□□□ -2.75
GABRB3-222ENST00000637226 RPRMQ9NS64 109 aa-2.13□□□□□ -2.75
GABRB3-222ENST00000637226 NDUFA12Q9UI09 145 aa-2.13□□□□□ -2.75
GABRB3-222ENST00000637226 TRAPPC2LQ9UL33 140 aa-2.13□□□□□ -2.75
GABRB3-222ENST00000637226 ZNF236Q9UL36 1845 aa-2.13□□□□□ -2.75
GABRB3-222ENST00000637226 LYSTQ99698 3801 aa-2.13□□□□□ -2.75
GABRB3-222ENST00000637226 LAMA3Q16787 3333 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 SBF2Q86WG5 1849 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 SYS1-DBNDD2H3BUS1 97 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 FAM107AO95990 144 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 PIRTP0C851 137 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 DCUN1D2Q6PH85 259 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 ATP11AUNQ6ZP68 121 aa-2.14□□□□□ -2.75
GABRB3-222ENST00000637226 CTXND1A0A1B0GTU2 59 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 YPEL1O60688 119 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 IFNA17P01571 189 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 TMED4Q7Z7H5 227 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 APLNQ9ULZ1 77 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 DNAJC15Q9Y5T4 150 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 R4GMQ9 66 aa-2.15□□□□□ -2.75
GABRB3-222ENST00000637226 ANK3Q12955 4377 aaKnown RBP-2.16□□□□□ -2.75
GABRB3-222ENST00000637226 M0R135 149 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 ZZEF1O43149 2961 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 IFNGP01579 166 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 CTXN2P0C2S0 81 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 COX8AP10176 69 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 HSD11B1P28845 292 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 TMEM170BQ5T4T1 132 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 LINC01545Q5VT33 79 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 RPL7L1Q6DKI1 246 aaKnown RBP-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 C9orf62Q8N4C0 152 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 MRC1P22897 1456 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 ADGRB1O14514 1584 aa-2.16□□□□□ -2.76
GABRB3-222ENST00000637226 NIPSNAP2O75323 286 aa-2.17□□□□□ -2.76
GABRB3-222ENST00000637226 PITX3O75364 302 aa-2.17□□□□□ -2.76
GABRB3-222ENST00000637226 REEP5Q00765 189 aa-2.17□□□□□ -2.76
GABRB3-222ENST00000637226 STX12Q86Y82 276 aa-2.17□□□□□ -2.76
GABRB3-222ENST00000637226 KIAA0556O60303 1618 aa-2.17□□□□□ -2.76
GABRB3-222ENST00000637226 DNAH11Q96DT5 4516 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 POLA1P09884 1462 aaPredicted RBP-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 DMXL1Q9Y485 3027 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 A6NIN4 97 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 E7EQ34 232 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 PFDN1O60925 122 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 POLR2HP52434 150 aaKnown RBP-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 COX17Q14061 63 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 CLLU1Q5K131 121 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 SPANXN1Q5VSR9 72 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 ZNF818PQ6ZRF7 136 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 CALML5Q9NZT1 146 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 STOML2Q9UJZ1 356 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 KNL1Q8NG31 2342 aa-2.18□□□□□ -2.76
GABRB3-222ENST00000637226 H0YGG7 62 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 PPP1R17O96001 155 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 HLA-DRB4P13762 266 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 RPL7P18124 248 aaKnown RBP-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 THEM6Q8WUY1 208 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 CFAP53Q96M91 514 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 CCDC115Q96NT0 180 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 LINC00312Q9Y6C7 94 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 HLA-DRB4X5D2U9 266 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 ACACAQ13085 2346 aa-2.19□□□□□ -2.76
GABRB3-222ENST00000637226 COL4A6Q14031 1691 aa-2.2□□□□□ -2.76
GABRB3-222ENST00000637226 SMIM24O75264 130 aa-2.2□□□□□ -2.76
GABRB3-222ENST00000637226 SERPINB1P30740 379 aa-2.2□□□□□ -2.76
GABRB3-222ENST00000637226 APOBP04114 4563 aaKnown RBP-2.2□□□□□ -2.76
GABRB3-222ENST00000637226 KALRNO60229 2985 aa-2.2□□□□□ -2.76
GABRB3-222ENST00000637226 PXDNQ92626 1479 aa-2.2□□□□□ -2.76
GABRB3-222ENST00000637226 PIPP12273 146 aaPredicted RBP-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 VSTM2AQ8TAG5 236 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 BANF2Q9H503 90 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 FMN2Q9NZ56 1722 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 NWD2Q9ULI1 1742 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 DNHD1Q96M86 4753 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 ERCC6Q03468 1493 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 TEX15Q9BXT5 2789 aa-2.21□□□□□ -2.76
GABRB3-222ENST00000637226 KIF21AQ7Z4S6 1674 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 HMGXB3Q12766 1538 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 ARHGEF12Q9NZN5 1544 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 AKAP13Q12802 2813 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 SYNMO15061 1565 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 TRBV7-4A0A0J9YYF1 115 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 A0A1W2PRE2 83 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 UBE2G1P62253 170 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 MRPS25P82663 173 aaKnown RBP-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 TMEM78Q5T7P6 136 aa-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 LSM2Q9Y333 95 aaKnown RBP-2.22□□□□□ -2.76
GABRB3-222ENST00000637226 USP9XQ93008 2570 aaPredicted RBP-2.22□□□□□ -2.77
GABRB3-222ENST00000637226 ANKRD11Q6UB99 2663 aaPredicted RBP-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 ADAMTS12P58397 1594 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 PTPN23Q9H3S7 1636 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 CPSF4LA6NMK7 179 aaKnown RBP-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 PAEPP09466 180 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 SPTSSBQ8NFR3 76 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 USMG5Q96IX5 58 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 NAA60Q9H7X0 242 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 MYH13Q9UKX3 1938 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 SLIT1O75093 1534 aa-2.23□□□□□ -2.77
GABRB3-222ENST00000637226 TULP4Q9NRJ4 1543 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms