RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 C11orf71Q6IPW1 123 aa11.59□□□□□ -0.55
CACNA1A-235ENST00000637004 FAM240AA0A1B0GVK7 77 aa11.58□□□□□ -0.56
CACNA1A-235ENST00000637004 C20orf203Q8NBC4 194 aa11.58□□□□□ -0.56
CACNA1A-235ENST00000637004 M0QY20 66 aa11.58□□□□□ -0.56
CACNA1A-235ENST00000637004 ZNF56Q15929 161 aa11.58□□□□□ -0.56
CACNA1A-235ENST00000637004 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.56
CACNA1A-235ENST00000637004 A0A0J9YXV3 536 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 C19orf54Q5BKX5 351 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 IGKV3-7A0A075B6H7 116 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 TRBV12-3P01733 135 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 PRSS2P07478 247 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 MOB4Q9Y3A3 225 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 UNC79Q9P2D8 2635 aa11.57□□□□□ -0.56
CACNA1A-235ENST00000637004 H7C423 109 aa11.56□□□□□ -0.56
CACNA1A-235ENST00000637004 NRGNQ92686 78 aa11.56□□□□□ -0.56
CACNA1A-235ENST00000637004 WIPF1O43516 503 aa11.56□□□□□ -0.56
CACNA1A-235ENST00000637004 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
CACNA1A-235ENST00000637004 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
CACNA1A-235ENST00000637004 LINC00527Q9UJ94 153 aa11.56□□□□□ -0.56
CACNA1A-235ENST00000637004 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 I3L3M4 83 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 NPFFO15130 113 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 RHPN1-AS1Q9BWJ2 59 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 USMG5Q96IX5 58 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 LITAFQ99732 161 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 SPANXDQ9BXN6 97 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 SPANXCQ9NY87 97 aa11.55□□□□□ -0.56
CACNA1A-235ENST00000637004 TMEM219Q86XT9 240 aa11.54□□□□□ -0.56
CACNA1A-235ENST00000637004 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
CACNA1A-235ENST00000637004 DEFB121Q5J5C9 76 aa11.53□□□□□ -0.56
CACNA1A-235ENST00000637004 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
CACNA1A-235ENST00000637004 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
CACNA1A-235ENST00000637004 APCP25054 2843 aa11.53□□□□□ -0.56
CACNA1A-235ENST00000637004 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.56
CACNA1A-235ENST00000637004 ADARB2-AS1A8MUL3 147 aa11.52□□□□□ -0.57
CACNA1A-235ENST00000637004 LST1O00453 97 aa11.52□□□□□ -0.57
CACNA1A-235ENST00000637004 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.57
CACNA1A-235ENST00000637004 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 MIAQ16674 131 aa11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 H3BUA1 57 aa11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 NAV2Q8IVL1 2488 aa11.51□□□□□ -0.57
CACNA1A-235ENST00000637004 TRBV7-7A0A0K0K1E9 115 aa11.5□□□□□ -0.57
CACNA1A-235ENST00000637004 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
CACNA1A-235ENST00000637004 CD28P10747 220 aa11.5□□□□□ -0.57
CACNA1A-235ENST00000637004 TRGV11A0A075B6L2 103 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 TMEM101Q96IK0 257 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 DUX3Q96PT4 197 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 TMEM126AQ9H061 195 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 SMIM9A6NGZ8 99 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 CLEC2BQ92478 149 aa11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-235ENST00000637004 TMEM61Q8N0U2 210 aa11.48□□□□□ -0.57
CACNA1A-235ENST00000637004 MED13LQ71F56 2210 aa11.48□□□□□ -0.57
CACNA1A-235ENST00000637004 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
CACNA1A-235ENST00000637004 ACYP1P07311 99 aa11.48□□□□□ -0.57
CACNA1A-235ENST00000637004 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
CACNA1A-235ENST00000637004 DCANP1Q8TF63 244 aa11.47□□□□□ -0.57
CACNA1A-235ENST00000637004 VSIG2Q96IQ7 327 aa11.47□□□□□ -0.57
CACNA1A-235ENST00000637004 IMUPQ9GZP8 106 aa11.47□□□□□ -0.57
CACNA1A-235ENST00000637004 CELSR1Q9NYQ6 3014 aa11.47□□□□□ -0.57
CACNA1A-235ENST00000637004 IGHV1OR15-1A0A075B7D0 117 aa11.46□□□□□ -0.57
CACNA1A-235ENST00000637004 CHCHD5Q9BSY4 110 aa11.46□□□□□ -0.57
CACNA1A-235ENST00000637004 K7EMT4 169 aa11.45□□□□□ -0.58
CACNA1A-235ENST00000637004 TIMM17BO60830 172 aa11.45□□□□□ -0.58
CACNA1A-235ENST00000637004 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
CACNA1A-235ENST00000637004 LMO4P61968 165 aa11.45□□□□□ -0.58
CACNA1A-235ENST00000637004 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
CACNA1A-235ENST00000637004 NPC2P61916 151 aa11.44□□□□□ -0.58
CACNA1A-235ENST00000637004 Q6ZSV7 163 aa11.44□□□□□ -0.58
CACNA1A-235ENST00000637004 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
CACNA1A-235ENST00000637004 IGHG2P01859 326 aa11.43□□□□□ -0.58
CACNA1A-235ENST00000637004 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
CACNA1A-235ENST00000637004 FAM104AQ969W3 186 aa11.43□□□□□ -0.58
CACNA1A-235ENST00000637004 CREBBPQ92793 2442 aa11.43□□□□□ -0.58
CACNA1A-235ENST00000637004 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-235ENST00000637004 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
CACNA1A-235ENST00000637004 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 IGHV3OR16-10A0A075B7F0 116 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 A0A1W2PPR1 153 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 LINC01587Q99440 93 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 ANKRD17O75179 2603 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 CIRBPQ14011 172 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 CEMP1Q6PRD7 247 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 C3orf56Q8N813 242 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 UBTD1Q9HAC8 227 aa11.41□□□□□ -0.58
CACNA1A-235ENST00000637004 MAST4O15021 2626 aa11.4□□□□□ -0.58
CACNA1A-235ENST00000637004 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.59
CACNA1A-235ENST00000637004 LINC00694P0DN24 101 aa11.4□□□□□ -0.59
CACNA1A-235ENST00000637004 SPINK13Q1W4C9 94 aa11.4□□□□□ -0.59
CACNA1A-235ENST00000637004 RNASE13Q5GAN3 156 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-235ENST00000637004 LINC00643Q86TS7 51 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms