RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	DPM2	O94777	84 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	G0S2	P27469	103 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	SLC25A29	Q8N8R3	303 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	C20orf203	Q8NBC4	194 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	TRAV12-1	A0A0B4J245	112 aa		11.29	□□□□□ -0.6
CACNA1A-231	ENST00000636816	ZNRF2	Q8NHG8	242 aa		11.29	□□□□□ -0.6
CACNA1A-231	ENST00000636816	DNAJC30	Q96LL9	226 aa		11.29	□□□□□ -0.6
CACNA1A-231	ENST00000636816	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-231	ENST00000636816	MAST4	O15021	2626 aa		11.29	□□□□□ -0.6
CACNA1A-231	ENST00000636816	IGHV4-30-4	P0DP06	118 aa		11.28	□□□□□ -0.6
CACNA1A-231	ENST00000636816	HNRNPA3	P51991	378 aa	Known RBP	11.28	□□□□□ -0.6
CACNA1A-231	ENST00000636816	PKD1L1	Q8TDX9	2849 aa		11.28	□□□□□ -0.6
CACNA1A-231	ENST00000636816	KIR2DL5B	Q8NHK3	375 aa		11.28	□□□□□ -0.6
CACNA1A-231	ENST00000636816	CMYA5	Q8N3K9	4069 aa		11.28	□□□□□ -0.6
CACNA1A-231	ENST00000636816		F8VRH5	84 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816		K7EQD1	137 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	DEFB130B	P0DP73	79 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	DEFB130A	P0DP74	79 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	APOC4	P55056	127 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	IGKV2D-26	A0A0A0MRZ7	120 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	DEFB4A	O15263	64 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	SLC25A34	Q6PIV7	304 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TMEM141	Q96I45	108 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TIMM17A	Q99595	171 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	CHCHD7	Q9BUK0	85 aa		11.27	□□□□□ -0.61
CACNA1A-231	ENST00000636816	COL6A5	A8TX70	2615 aa		11.26	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TRBV7-3	A0A075B6L6	115 aa		11.26	□□□□□ -0.61
CACNA1A-231	ENST00000636816	LOC100131303	A0A0U1RQF7	123 aa		11.26	□□□□□ -0.61
CACNA1A-231	ENST00000636816	COX8A	P10176	69 aa		11.26	□□□□□ -0.61
CACNA1A-231	ENST00000636816	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.26	□□□□□ -0.61
CACNA1A-231	ENST00000636816	GAGE12J	A6NER3	117 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	LINC01549	A6NIU2	74 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	GAGE1	Q13065	139 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	GAGE4	Q13068	117 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	GAGE5	Q13069	117 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	FHL2	Q14192	279 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	GAGE13	Q4V321	117 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	OR11H2	Q8NH07	326 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	CST9L	Q9H4G1	147 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	SMIM9	A6NGZ8	99 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	FGF6	P10767	208 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	COL5A1-AS1	Q5SY13	56 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	PCP2	Q8IVA1	136 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	FAM104A	Q969W3	186 aa		11.25	□□□□□ -0.61
CACNA1A-231	ENST00000636816	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.24	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TRGV4	A0A0C4DH28	118 aa		11.24	□□□□□ -0.61
CACNA1A-231	ENST00000636816	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.24	□□□□□ -0.61
CACNA1A-231	ENST00000636816	NMU	P48645	174 aa		11.24	□□□□□ -0.61
CACNA1A-231	ENST00000636816	PMVK	Q15126	192 aa		11.24	□□□□□ -0.61
CACNA1A-231	ENST00000636816	PLN	P26678	52 aa		11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	RPL36A	P83881	106 aa	Known RBP	11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	COTL1	Q14019	142 aa		11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	LINC00612	Q8N6U2	182 aa		11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	RPL36AL	Q969Q0	106 aa	Known RBP	11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TTTY13	Q9BZ97	58 aa		11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	IGLV4-69	A0A075B6H9	119 aa		11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TRBV10-1	A0A0K0K1A3	114 aa		11.23	□□□□□ -0.61
CACNA1A-231	ENST00000636816	IGLV4-3	A0A075B6K6	122 aa		11.22	□□□□□ -0.61
CACNA1A-231	ENST00000636816	IGHV4-28	A0A0C4DH34	117 aa		11.22	□□□□□ -0.61
CACNA1A-231	ENST00000636816	UBE2D3	P61077	147 aa		11.22	□□□□□ -0.61
CACNA1A-231	ENST00000636816	UBE2D2	P62837	147 aa		11.22	□□□□□ -0.61
CACNA1A-231	ENST00000636816	BATF	Q16520	125 aa		11.22	□□□□□ -0.61
CACNA1A-231	ENST00000636816	FAM222A	Q5U5X8	452 aa		11.22	□□□□□ -0.61
CACNA1A-231	ENST00000636816	TRBV6-4	A0A1B0GX49	114 aa		11.21	□□□□□ -0.61
CACNA1A-231	ENST00000636816	EGFEM1P	Q0D2K5	195 aa		11.21	□□□□□ -0.61
CACNA1A-231	ENST00000636816	NTM-AS1	Q6ZSK4	140 aa		11.21	□□□□□ -0.61
CACNA1A-231	ENST00000636816	C11orf86	A6NJI1	115 aa		11.21	□□□□□ -0.62
CACNA1A-231	ENST00000636816		G3V4G9	280 aa		11.21	□□□□□ -0.62
CACNA1A-231	ENST00000636816	RNASE13	Q5GAN3	156 aa	Known RBP	11.21	□□□□□ -0.62
CACNA1A-231	ENST00000636816	C2orf91	Q6ZV80	131 aa		11.21	□□□□□ -0.62
CACNA1A-231	ENST00000636816	BOD1L2	Q8IYS8	172 aa		11.21	□□□□□ -0.62
CACNA1A-231	ENST00000636816	RNF183	Q96D59	192 aa		11.2	□□□□□ -0.62
CACNA1A-231	ENST00000636816	CIDEA	O60543	219 aa		11.19	□□□□□ -0.62
CACNA1A-231	ENST00000636816	HINT1	P49773	126 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-231	ENST00000636816		Q8NAQ8	132 aa		11.19	□□□□□ -0.62
CACNA1A-231	ENST00000636816	UBE2D4	Q9Y2X8	147 aa		11.19	□□□□□ -0.62
CACNA1A-231	ENST00000636816	PYGO1	Q9Y3Y4	419 aa		11.19	□□□□□ -0.62
CACNA1A-231	ENST00000636816	DAZ4	Q86SG3	579 aa	Known RBP	11.18	□□□□□ -0.62
CACNA1A-231	ENST00000636816	VCX2	Q9H322	139 aa		11.18	□□□□□ -0.62
CACNA1A-231	ENST00000636816	DAZ3	Q9NR90	486 aa	Known RBP	11.18	□□□□□ -0.62
CACNA1A-231	ENST00000636816	LINC00694	P0DN24	101 aa		11.17	□□□□□ -0.62
CACNA1A-231	ENST00000636816	ZNF25	P17030	456 aa	Predicted RBP	11.17	□□□□□ -0.62
CACNA1A-231	ENST00000636816	MAPKAPK5-AS1	Q8N8E1	139 aa		11.17	□□□□□ -0.62
CACNA1A-231	ENST00000636816	CELA1	Q9UNI1	258 aa		11.17	□□□□□ -0.62
CACNA1A-231	ENST00000636816	LYRM9	A8MSI8	78 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	MPV17L2	Q567V2	206 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	AMELX	Q99217	191 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	TRAV8-6	A0A0B4J262	113 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816		A0A0J9YXV3	536 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	DLEU1	O43261	78 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	MIF	P14174	115 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816		Q6ZUT4	128 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	PRADC1	Q9BSG0	188 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	RETN	Q9HD89	108 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	SPANXA1	Q9NS26	97 aa		11.16	□□□□□ -0.62
CACNA1A-231	ENST00000636816	CRYBA4	P53673	196 aa		11.14	□□□□□ -0.63
CACNA1A-231	ENST00000636816	SBSPON	Q8IVN8	264 aa		11.14	□□□□□ -0.63
CACNA1A-231	ENST00000636816	TMEM170B	Q5T4T1	132 aa		11.14	□□□□□ -0.63
CACNA1A-231	ENST00000636816	PAPPA-AS1	Q5QFB9	102 aa		11.13	□□□□□ -0.63
CACNA1A-231	ENST00000636816	NFE4	Q86UQ8	179 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms