RNA–Protein interactions for RNA: ENST00000636647.1

CHRNA7-218, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-218ENST00000636647 PSMB2P49721 201 aa3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 RPL32P62910 135 aaKnown RBP3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 KRTAP1-1Q07627 177 aa3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 NFE4Q86UQ8 179 aa3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 PTH2Q96A98 100 aa3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 USMG5Q96IX5 58 aa3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 GEMIN7Q9H840 131 aaKnown RBP3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 MRPL16Q9NX20 251 aaKnown RBP3.71□□□□□ -1.82
CHRNA7-218ENST00000636647 HERC2O95714 4834 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 TRAV12-2A0A075B6T6 113 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 TRBV7-9A0A0J9YWB2 115 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 TRBV6-5A0A0K0K1A5 114 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 H3BUA1 57 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 LGALS9O00182 355 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 VCYO14598 125 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 APOMO95445 188 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV3-30P01768 117 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV3-30-5P0DP03 117 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 UBE2D3P61077 147 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 UBE2D2P62837 147 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 PMVKQ15126 192 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 ZNF876PQ49A33 203 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 SERTAD4-AS1Q5TG53 156 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 CFAP126Q5VTH2 177 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 NDUFA11Q86Y39 141 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 SBSPONQ8IVN8 264 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 C10orf105Q8TEF2 133 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 ZNF418Q8TF45 676 aaPredicted RBP3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 DCANP1Q8TF63 244 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 FAM104AQ969W3 186 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 ZNF580Q9UK33 172 aa3.7□□□□□ -1.82
CHRNA7-218ENST00000636647 ANK3Q12955 4377 aaKnown RBP3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 TENM1Q9UKZ4 2725 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 SONP18583 2426 aaKnown RBP3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV4-30-2A0A087WSY4 118 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 TMEM223A0PJW6 202 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 SDHAF1A6NFY7 115 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 USP17L23D6RBM5 183 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 F5H697 171 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 K7EMT4 169 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 M0QY20 66 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 TCL1BO95988 128 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 IGKV3-20P01619 116 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 PRM2P04554 102 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 ZNF688P0C7X2 276 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 RBMY1A1P0DJD3 496 aaKnown RBP3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 RBMY1CP0DJD4 496 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 PROK1P58294 105 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 FOXI1Q12951 378 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 RBMY1FQ15415 496 aaKnown RBP3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 SLC25A29Q8N8R3 303 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 TIMM17AQ99595 171 aa3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 ZNF256Q9Y2P7 627 aaPredicted RBP3.69□□□□□ -1.82
CHRNA7-218ENST00000636647 LOC107984156A0A0G2JMH3 177 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 A0A0J9YX75 114 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 A0A0J9YXV3 536 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 TRBV27A0A0K0K1C4 114 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 K7EQG2 157 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 LEPROTO15243 131 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 PPP1R17O96001 155 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 TGFAP01135 160 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 ZNF22P17026 224 aaPredicted RBP3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 SRSF9Q13242 221 aaKnown RBP eCLIP3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 TMEM170BQ5T4T1 132 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 LCE2AQ5TA79 106 aaPredicted RBP3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 LCE2CQ5TA81 110 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 FAM159AQ6UWV7 190 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 SCGB1D4Q6XE38 83 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 MUSTN1Q8IVN3 82 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 ARL17AQ8IVW1 177 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 ATP6V0E2Q8NHE4 81 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 TMEM263Q8WUH6 116 aaKnown RBP3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 DLX4Q92988 240 aaPredicted RBP3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 FAM110AQ9BQ89 295 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 C1QTNF4Q9BXJ3 329 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 Q9UF83 564 aa3.68□□□□□ -1.82
CHRNA7-218ENST00000636647 IGLV4-3A0A075B6K6 122 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV1OR15-1A0A075B7D0 117 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 RBMY1BA6NDE4 496 aaKnown RBP3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 RBMY1EA6NEQ0 496 aaKnown RBP3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 J3QQQ9 107 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV3-33P01772 117 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 IGHV4-59P01825 116 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 MT-ATP8P03928 68 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 ELANEP08246 267 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 RBMY1DP0C7P1 496 aaKnown RBP3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 PSMB8P28062 276 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 ID1P41134 155 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 DSCR9P59020 149 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 HERVK_113P61574 105 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 RHOHQ15669 191 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 SPINK13Q1W4C9 94 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 DEFB112Q30KQ8 113 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 NSUN5P1Q3KNT7 163 aa3.67□□□□□ -1.82
CHRNA7-218ENST00000636647 FAM74A4Q5TZK3 123 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms