RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 RNASE7Q9H1E1 156 aaKnown RBP0.99□□□□□ -2.25
SYNGAP1-216ENST00000636640 PLAC8Q9NZF1 115 aa0.99□□□□□ -2.25
SYNGAP1-216ENST00000636640 GNG13Q9P2W3 67 aa0.99□□□□□ -2.25
SYNGAP1-216ENST00000636640 BOLA1Q9Y3E2 137 aa0.99□□□□□ -2.25
SYNGAP1-216ENST00000636640 URGCP-MRPS24S4R325 110 aa0.99□□□□□ -2.25
SYNGAP1-216ENST00000636640 hCG_2014768A0A024R1R8 64 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 TRBV25-1A0A075B6N4 114 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 IGHV3-64A0A075B6Q5 118 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 IGHV1-24A0A0C4DH33 117 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 LINC00959A0A1B0GUT2 108 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 A0A1B0GUV1 79 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 FAM168BA1KXE4 195 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 HMSDA8MTL9 139 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 C9JQL5 133 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 CCL25O15444 150 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 NCR2O95944 276 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 IFNA1P01562 189 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 CRPP02741 224 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 CXCL1P09341 107 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 H2AFB1P0C5Y9 115 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 BCL2P10415 239 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 FGF6P10767 208 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 ESDP10768 282 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 CTRLP40313 264 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 XCL1P47992 114 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 AMTP48728 403 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 SULT1A2P50226 295 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 POLR2KP53803 58 aaKnown RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 CNBPP62633 177 aaKnown RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 PRR3P79522 188 aaKnown RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 SRSF3P84103 164 aaKnown RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 MEF2BQ02080 365 aaPredicted RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 Q0VG73 95 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 ZNF345Q14585 488 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 TOR2AQ5JU69 321 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 C10orf25Q5T742 122 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 ZC2HC1BQ5TFG8 222 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 SERTAD4-AS1Q5TG53 156 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 DGAT2L7PQ6IED9 249 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 RNASEKQ6P5S7 137 aaKnown RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 ALKAL2Q6UX46 152 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 Q6ZRU5 148 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 PHF5AQ7RTV0 110 aaKnown RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 C9orf62Q8N4C0 152 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 STPG4Q8N801 248 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 PRR26Q8N8Z3 221 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 CHCHD10Q8WYQ3 142 aaPredicted RBP0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 RMI2Q96E14 147 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 LINC01600Q96MT4 127 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 AP1S3Q96PC3 154 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 TMEM243Q9BU79 118 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 DPH3P1Q9H4G8 78 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 NIT2Q9NQR4 276 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 MED9Q9NWA0 146 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 TMEM242Q9NWH2 141 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 COX11Q9Y6N1 276 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 MUC17Q685J3 4493 aa0.98□□□□□ -2.25
SYNGAP1-216ENST00000636640 FAT4Q6V0I7 4981 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 IGLV4-69A0A075B6H9 119 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 GVQW2A0A096LPI5 108 aaPredicted RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 TRAV8-4A0A0B4J246 113 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 TRAV1-1A0A0B4J248 108 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 A0A0D9SG52 128 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 KANTRA0A1W2PQU2 76 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 SDHAF1A6NFY7 115 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 UMAD1C9J7I0 102 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 GATCO43716 136 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 PFDN1O60925 122 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 NDUFS6O75380 124 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 P01737 135 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 S100A9P06702 114 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 SRP19P09132 144 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 KRTAP1-4P0C5Y4 121 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 RAB4AP20338 218 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 GNG4P50150 75 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 CEBPGP53567 150 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 RPL39P62891 51 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 CACNG7P62955 275 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 GAGE2BQ13066 116 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 COTL1Q14019 142 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 ELOBQ15370 118 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 TWIST1Q15672 202 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 RGS21Q2M5E4 152 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 MRPL51Q4U2R6 128 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 C14orf177Q52M58 125 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 C9orf116Q5BN46 136 aaPredicted RBP0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 WDR73Q6P4I2 378 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 C2orf82Q6UX34 121 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 UNQ6190/PRO20217Q6UXQ8 127 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 Q6ZUT4 128 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 C5orf38Q86SI9 138 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 AMN1Q8IY45 258 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 NRACQ8N912 160 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 CLRN3Q8NCR9 226 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 NUP35Q8NFH5 326 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 OR5A1Q8NGJ0 315 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 DPH3Q96FX2 82 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 CNFNQ9BYD5 112 aa0.97□□□□□ -2.25
SYNGAP1-216ENST00000636640 NKX6-2Q9C056 277 aaPredicted RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms