RNA–Protein interactions for RNA: ENST00000636346.1

FOXG1-202, Transcript of forkhead box G1, humanhuman

TSL 5

Gene FOXG1, Length 111 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1-202ENST00000636346 HLA-DRB4X5D2U9 266 aa-2.58□□□□□ -2.82
FOXG1-202ENST00000636346 CUBNO60494 3623 aa-2.59□□□□□ -2.82
FOXG1-202ENST00000636346 LAMA1P25391 3075 aa-2.59□□□□□ -2.82
FOXG1-202ENST00000636346 MT-ND4LP03901 98 aa-2.59□□□□□ -2.82
FOXG1-202ENST00000636346 PLECQ15149 4684 aaKnown RBP-2.59□□□□□ -2.82
FOXG1-202ENST00000636346 PAPPAQ13219 1627 aa-2.6□□□□□ -2.83
FOXG1-202ENST00000636346 AGPAT4-IT1Q9H0P7 198 aa-2.6□□□□□ -2.83
FOXG1-202ENST00000636346 BANF2Q9H503 90 aa-2.6□□□□□ -2.83
FOXG1-202ENST00000636346 GOLGA4Q13439 2230 aaKnown RBP-2.6□□□□□ -2.83
FOXG1-202ENST00000636346 MUC22E2RYF6 1773 aaPredicted RBP-2.61□□□□□ -2.83
FOXG1-202ENST00000636346 SMIM24O75264 130 aa-2.61□□□□□ -2.83
FOXG1-202ENST00000636346 RPRMQ9NS64 109 aa-2.61□□□□□ -2.83
FOXG1-202ENST00000636346 GID8Q9NWU2 228 aa-2.61□□□□□ -2.83
FOXG1-202ENST00000636346 YPEL1O60688 119 aa-2.62□□□□□ -2.83
FOXG1-202ENST00000636346 PAEPP09466 180 aa-2.62□□□□□ -2.83
FOXG1-202ENST00000636346 C9orf116Q5BN46 136 aaPredicted RBP-2.62□□□□□ -2.83
FOXG1-202ENST00000636346 OR9Q1Q8NGQ5 310 aa-2.62□□□□□ -2.83
FOXG1-202ENST00000636346 CHMP6Q96FZ7 201 aa-2.62□□□□□ -2.83
FOXG1-202ENST00000636346 LSM2Q9Y333 95 aaKnown RBP-2.62□□□□□ -2.83
FOXG1-202ENST00000636346 PKD1P98161 4303 aa-2.63□□□□□ -2.83
FOXG1-202ENST00000636346 TEX15Q9BXT5 2789 aa-2.63□□□□□ -2.83
FOXG1-202ENST00000636346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.64□□□□□ -2.83
FOXG1-202ENST00000636346 LAMA3Q16787 3333 aa-2.64□□□□□ -2.83
FOXG1-202ENST00000636346 H0YJX3 145 aa-2.64□□□□□ -2.83
FOXG1-202ENST00000636346 DPM2O94777 84 aa-2.64□□□□□ -2.83
FOXG1-202ENST00000636346 TMEM244Q5VVB8 128 aa-2.64□□□□□ -2.83
FOXG1-202ENST00000636346 TRIQKQ629K1 86 aa-2.64□□□□□ -2.83
FOXG1-202ENST00000636346 ERCC6Q03468 1493 aa-2.65□□□□□ -2.83
FOXG1-202ENST00000636346 OVOS2A0A0G2JMS6 1433 aa-2.65□□□□□ -2.83
FOXG1-202ENST00000636346 TNFP01375 233 aa-2.65□□□□□ -2.83
FOXG1-202ENST00000636346 MNS1Q8NEH6 495 aa-2.65□□□□□ -2.83
FOXG1-202ENST00000636346 SPRR2FQ96RM1 72 aa-2.65□□□□□ -2.83
FOXG1-202ENST00000636346 CCL18P55774 89 aa-2.66□□□□□ -2.84
FOXG1-202ENST00000636346 RPL7L1Q6DKI1 246 aaKnown RBP-2.66□□□□□ -2.84
FOXG1-202ENST00000636346 ATPIF1Q9UII2 106 aa-2.66□□□□□ -2.84
FOXG1-202ENST00000636346 NBASA2RRP1 2371 aa-2.67□□□□□ -2.84
FOXG1-202ENST00000636346 TMEM238C9JI98 176 aa-2.67□□□□□ -2.84
FOXG1-202ENST00000636346 SPANXN1Q5VSR9 72 aa-2.67□□□□□ -2.84
FOXG1-202ENST00000636346 DEFB105AQ8NG35 78 aa-2.67□□□□□ -2.84
FOXG1-202ENST00000636346 PIRTP0C851 137 aa-2.68□□□□□ -2.84
FOXG1-202ENST00000636346 UBE2G1P62253 170 aa-2.68□□□□□ -2.84
FOXG1-202ENST00000636346 OR8I2Q8N0Y5 310 aa-2.68□□□□□ -2.84
FOXG1-202ENST00000636346 TMEM35BQ8NCS4 154 aa-2.68□□□□□ -2.84
FOXG1-202ENST00000636346 SMIM4Q8WVI0 70 aa-2.68□□□□□ -2.84
FOXG1-202ENST00000636346 DSPP15924 2871 aaKnown RBP-2.69□□□□□ -2.84
FOXG1-202ENST00000636346 A6NIN4 97 aa-2.69□□□□□ -2.84
FOXG1-202ENST00000636346 IFNA17P01571 189 aa-2.69□□□□□ -2.84
FOXG1-202ENST00000636346 DEFB135Q30KP9 77 aa-2.69□□□□□ -2.84
FOXG1-202ENST00000636346 VPS13BQ7Z7G8 4022 aa-2.69□□□□□ -2.84
FOXG1-202ENST00000636346 WDR87Q6ZQQ6 2873 aa-2.7□□□□□ -2.84
FOXG1-202ENST00000636346 DNAH9Q9NYC9 4486 aa-2.7□□□□□ -2.84
FOXG1-202ENST00000636346 M0R135 149 aa-2.7□□□□□ -2.84
FOXG1-202ENST00000636346 DEFB123Q8N688 67 aa-2.7□□□□□ -2.84
FOXG1-202ENST00000636346 PCBD2Q9H0N5 130 aa-2.7□□□□□ -2.84
FOXG1-202ENST00000636346 LINC00312Q9Y6C7 94 aa-2.7□□□□□ -2.84
FOXG1-202ENST00000636346 LRRC37A3O60309 1634 aa-2.71□□□□□ -2.84
FOXG1-202ENST00000636346 Q6JHZ5 121 aa-2.71□□□□□ -2.84
FOXG1-202ENST00000636346 ZNF818PQ6ZRF7 136 aa-2.71□□□□□ -2.84
FOXG1-202ENST00000636346 VSTM2AQ8TAG5 236 aa-2.71□□□□□ -2.84
FOXG1-202ENST00000636346 ANKRD11Q6UB99 2663 aaPredicted RBP-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 ROCK1Q13464 1354 aa-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 CTXND1A0A1B0GTU2 59 aa-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 TMEM128Q5BJH2 165 aa-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 RIF1Q5UIP0 2472 aaKnown RBP-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 SAMD13Q5VXD3 122 aa-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 SPTSSBQ8NFR3 76 aa-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 LINC00472Q9H8W2 130 aa-2.72□□□□□ -2.84
FOXG1-202ENST00000636346 LRRC37A2A6NM11 1700 aa-2.73□□□□□ -2.85
FOXG1-202ENST00000636346 MIC13Q5XKP0 118 aa-2.73□□□□□ -2.85
FOXG1-202ENST00000636346 TOMM20LQ6UXN7 152 aa-2.73□□□□□ -2.85
FOXG1-202ENST00000636346 R4GMQ9 66 aa-2.73□□□□□ -2.85
FOXG1-202ENST00000636346 ANK3Q12955 4377 aaKnown RBP-2.73□□□□□ -2.85
FOXG1-202ENST00000636346 TRBV20-1A0A075B6N2 111 aa-2.74□□□□□ -2.85
FOXG1-202ENST00000636346 PPP1R17O96001 155 aa-2.74□□□□□ -2.85
FOXG1-202ENST00000636346 PPP1R2P3Q6NXS1 205 aa-2.74□□□□□ -2.85
FOXG1-202ENST00000636346 ACACAQ13085 2346 aa-2.74□□□□□ -2.85
FOXG1-202ENST00000636346 DNHD1Q96M86 4753 aa-2.76□□□□□ -2.85
FOXG1-202ENST00000636346 G0S2P27469 103 aa-2.76□□□□□ -2.85
FOXG1-202ENST00000636346 MAGOHBQ96A72 148 aaKnown RBP-2.76□□□□□ -2.85
FOXG1-202ENST00000636346 PITX3O75364 302 aa-2.77□□□□□ -2.85
FOXG1-202ENST00000636346 TMEM170BQ5T4T1 132 aa-2.77□□□□□ -2.85
FOXG1-202ENST00000636346 MRC1P22897 1456 aa-2.77□□□□□ -2.85
FOXG1-202ENST00000636346 TNFSF15O95150 251 aa-2.78□□□□□ -2.85
FOXG1-202ENST00000636346 RPS28P62857 69 aaKnown RBP-2.78□□□□□ -2.85
FOXG1-202ENST00000636346 TCTE3Q8IZS6 198 aa-2.78□□□□□ -2.85
FOXG1-202ENST00000636346 ZNF236Q9UL36 1845 aa-2.78□□□□□ -2.85
FOXG1-202ENST00000636346 ARHGEF10O15013 1369 aa-2.78□□□□□ -2.85
FOXG1-202ENST00000636346 GAPVD1Q14C86 1478 aa-2.78□□□□□ -2.86
FOXG1-202ENST00000636346 DEFB112Q30KQ8 113 aa-2.79□□□□□ -2.86
FOXG1-202ENST00000636346 TRAV36DV7A0A075B6V5 113 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 M0R129 80 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 SCTP09683 121 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 CBLN1P23435 193 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 CMPK1P30085 196 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 HIGD1AQ9Y241 93 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 CASKIN1Q8WXD9 1431 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 NSD3Q9BZ95 1437 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 SYNJ1O43426 1573 aa-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 KDM5AP29375 1690 aaKnown RBP-2.8□□□□□ -2.86
FOXG1-202ENST00000636346 PRDM2Q13029 1718 aa-2.8□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms