RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	SFRP2	Q96HF1	295 aa		4.85	□□□□□ -1.63
CACNA1A-222	ENST00000636022	FMC1	Q96HJ9	113 aa		4.85	□□□□□ -1.63
CACNA1A-222	ENST00000636022	HIST1H2BN	Q99877	126 aa		4.85	□□□□□ -1.63
CACNA1A-222	ENST00000636022	HIST1H2BM	Q99879	126 aa		4.85	□□□□□ -1.63
CACNA1A-222	ENST00000636022	MAP1LC3B	Q9GZQ8	125 aa		4.85	□□□□□ -1.63
CACNA1A-222	ENST00000636022	FAM30A	Q9NZY2	134 aa		4.85	□□□□□ -1.63
CACNA1A-222	ENST00000636022		A0A087WWC5	75 aa		4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022	TRAV8-3	A0A0A6YYJ7	113 aa		4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022		M0R036	132 aa		4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022	RHOD	O00212	210 aa		4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022	DAZ4	Q86SG3	579 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022	TM2D2	Q9BX73	214 aa		4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022	DAZ3	Q9NR90	486 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1A-222	ENST00000636022	UBR4	Q5T4S7	5183 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022		A0A087WWL8	130 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022		C9JQL5	133 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	AKR1C3	P42330	323 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	UBE2G1	P62253	170 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	OCIAD2	Q56VL3	154 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	FAM74A4	Q5TZK3	123 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	CST9LP1	Q5W188	147 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022		Q6ZSA8	131 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	NIT1	Q86X76	327 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	SYT8	Q8NBV8	401 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	MBD3L1	Q8WWY6	194 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	DNAJC30	Q96LL9	226 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	MIEN1	Q9BRT3	115 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	RPS10P5	Q9NQ39	176 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	VAX2	Q9UIW0	290 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	PHLDA3	Q9Y5J5	127 aa		4.83	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TMSB15B	A0A087X1C1	80 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TRBV10-1	A0A0K0K1A3	114 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	KANTR	A0A1W2PQU2	76 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022		M0R381	172 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	LECT2	O14960	151 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	PAGE4	O60829	102 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	SEC11B	P0C7V7	166 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TPT1	P13693	172 aa	Known RBP	4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	FABP4	P15090	132 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	UBE2D3	P61077	147 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	UBE2D2	P62837	147 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	RNF151	Q2KHN1	245 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	OR10G8	Q8NGN5	311 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	VPS25	Q9BRG1	176 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	MLST8	Q9BVC4	326 aa		4.82	□□□□□ -1.64
CACNA1A-222	ENST00000636022	UMAD1	C9J7I0	102 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	CXCL1	P09341	107 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	IQCJ	Q1A5X6	159 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	PRR27	Q6MZM9	219 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	BAALC	Q8WXS3	180 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	ISOC2	Q96AB3	205 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	CHCHD7	Q9BUK0	85 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	KRTAP4-8	Q9BYQ9	185 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	CST9L	Q9H4G1	147 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	COX11	Q9Y6N1	276 aa		4.81	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TRBV7-3	A0A075B6L6	115 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022		A0A1B0GV50	99 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022		A0A1B0GV72	72 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	SNAI2	O43623	268 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TRGC1	P0CF51	173 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	RPS10	P46783	165 aa	Known RBP	4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	RPL36A	P83881	106 aa	Known RBP	4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	OR10AG1	Q8NH19	301 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	FAM213B	Q8TBF2	198 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	RPL36AL	Q969Q0	106 aa	Known RBP	4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	KLK12	Q9UKR0	248 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	URGCP-MRPS24	S4R325	110 aa		4.8	□□□□□ -1.64
CACNA1A-222	ENST00000636022	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	IGKV2D-24	A0A075B6R9	120 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022		A0A087WX48	190 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TRBV6-8	A0A0A6YYG3	113 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	OR5AL1	P0C617	328 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	CCL20	P78556	96 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	ELOB	Q15370	118 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	LINC01620	Q4KN68	170 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	BAGE2	Q86Y30	109 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022		Q8N976	141 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	NEXN-AS1	Q8NBZ9	246 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	RMI2	Q96E14	147 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	KIF25-AS1	Q9Y6Z4	181 aa		4.79	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	MUC21	A0A0G2JKD1	596 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	MUC21	A0A140T8X8	626 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TSPAN13	O95857	204 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	ENHO	Q6UWT2	76 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	UBE2W	Q96B02	151 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	ZNF471	Q9BX82	626 aa	Predicted RBP	4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	SMDT1	Q9H4I9	107 aa		4.78	□□□□□ -1.64
CACNA1A-222	ENST00000636022	TRAV1-1	A0A0B4J248	108 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	RBFOX3	A6NFN3	312 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022		K7ERU9	68 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	IGLV2-8	P01709	118 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	TRGC2	P03986	189 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	SULT1A2	P50226	295 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	KRTAP10-4	P60372	401 aa	Predicted RBP	4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022		Q0VG73	95 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	ZNF56	Q15929	161 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	MPV17L2	Q567V2	206 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	SPANXN1	Q5VSR9	72 aa		4.77	□□□□□ -1.65
CACNA1A-222	ENST00000636022	TEX43	Q6ZNM6	134 aa		4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms